Pungitius pungitius (ninespine stickleback): 119214603
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Entry
119214603 CDS
T07626
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like isoform X2
KO
K26457
neuronal PAS domain-containing protein 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119214603 (npas4l)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119214603 (npas4l)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_9
PAS_2
HLH
Motif
Other DBs
NCBI-GeneID:
119214603
NCBI-ProteinID:
XP_037322344
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Position
13:13112317..13119094
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AA seq
813 aa
AA seq
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MSSVVYSKCVFSKETFELLLLPTSLYLFIYALLSPGVKMTIWCTSCQCHVSAPCTSHLVP
EHHRSSFCRRFRSTKGASKARRDHINHEIRNMRALLPTTQEDQERLSYLHSMAAICAYIR
KSVVFQGLPTGARSHSLPYEAFLQALHGFILVTTAQGRLVYVSENVDQYLGLSMIDVLQG
DTFYDMVERSDIDVVKTNLDIEHNSPSERSFVCCMQTTKAFKLQFGSCCSMMVKGSFKMF
PQPWQPSSSARPTGEPLFVALCTPTVDRLQSSGSTSCDSFYSVHRLDMTFTQLSDSVSCF
LGYSTEEMTGRSWYSLIHPDDLSLSADSHRSLMRADEGFQVEMVLRLQCKDLSWTWIYIR
ANKESDCRGISCTNFIIGETEARFLQKKITSDAFRPSPTARPASQEAPRAETHGDAKCFK
RRRTSSGQSDEPGHKARRESGRGPCQVACASYRGDGSPAPPGDSTALFTPPISPASSSSA
LQQQEELSRDLLLEVHGYADQLLSSPECSPSYYSYPEAVLTCHRSPSGSLASAAEHAFEE
AAFGVLAARSPASSSSSYSYSSYSSSSPTYDFQACTADARLVPECPSVADLCDSAADCAL
HHDDFGVPQQTQEGGLVHRVPYHVSPAHSSLLTPGQSPDSRETAHYNAREQAEISILAQQ
ISSLASSFAVYRTHATTGAQPAGRQWPCHPALPSAPPLKGELELDDGVFDSILKDLDVDV
GAGKEDFPPPGVAAFGYQQGLLRCRMGSHESEPEPLGLSPTIAEDPLPAEQFIAVEPFSL
QLGRHDRNTGLHQLNRYMQSHLQQGELAEENLY
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctgttgtttactcaaagtgtgtgttttccaaagaaacgtttgaactactactt
cttcccacttcgctgtatttatttatttatgctttactttccccaggtgtcaaaatgact
atttggtgcacctcctgccagtgtcacgtcagtgctccgtgcacgtctcatctcgtgccc
gagcatcatcgcagctccttctgcaggaggttcagatccaccaaaggagcgtccaaagcc
cggcgggaccacatcaatcacgagatcaggaatatgcgcgctctgttgcctaccacccag
gaggaccaggagcgtctctcctacctgcactccatggccgccatctgcgcctacatcagg
aagtctgttgtcttccagggactcccgactggggcgagatcgcactctctgccgtatgag
gcctttcttcaagccctgcacggcttcatcctggtcaccactgcacaagggaggctggtc
tacgtgtccgagaatgttgaccaatacctcggtttgtccatgatagacgtgctgcaagga
gacactttctacgacatggtggaacgctctgacattgatgttgtgaaaacaaacctggac
attgaacacaactcgccatcagagaggagctttgtatgctgcatgcaaaccaccaaagcc
ttcaagctgcaattcggcagctgctgttccatgatggtcaaagggagcttcaaaatgttc
ccccagccgtggcagccctcctcttcagcccgtcccaccggcgagcctctctttgtggcc
ctctgcacccccacggtcgaccgcctgcagagctccggctccacctcctgtgacagcttc
tacagtgtccacaggttggatatgaccttcactcagctgtcagacagcgtctcctgtttt
ttgggctattcgactgaggaaatgaccggccgatcatggtacagtcttatccaccctgac
gatctctccttgagtgccgattctcatagaagtttaatgcgggcagatgagggcttccag
gtagagatggtgctgagactccaatgcaaggacctgtcctggacctggatctacatccga
gctaacaaggagtctgactgccggggcatcagctgcaccaacttcatcatcggtgaaacg
gaggcccgatttctgcagaagaaaatcaccagcgacgccttcaggccgtcgcccacggcc
cgtcctgcgagccaggaggcgcctcgcgccgagacccacggcgacgcaaagtgtttcaag
agacggaggacgtccagcggccaaagcgacgagcccggccataaggccaggagggagagc
gggcgaggcccgtgccaggtggcgtgcgcctcctaccgaggcgacggctcgcccgctccc
cctggggacagcacggctctcttcacgcctcccatcagcccagcctcctccagctccgct
ctgcagcagcaggaggagctcagccgtgacctcctgctggaggtgcacgggtacgccgat
cagctgctgtcctcccccgagtgctctccctcctactactcgtacccggaggcggtgctc
acctgtcaccgatcaccctccggctccctcgcttcggccgctgagcacgcgtttgaggag
gctgccttcggcgtgctcgccgcccgctccccagcctcctcctcctcctcctactcctac
tcctcctactcctcctcatcgccgacctatgatttccaagcgtgtacggccgatgctcga
ttggtccccgagtgcccgtccgtggcggacttgtgcgacagcgcggcggactgcgcgctg
catcacgacgacttcggcgtcccgcagcagacacaagagggaggcctcgtccaccgcgtc
ccctaccacgtctcacccgcacattcgagtctcctcacccccggccaatctcccgactcc
agggagacggcacattacaacgcgagggagcaggcagagatcagcattctggctcagcag
atctcgtccctggcaagcagcttcgccgtgtaccgcacgcacgcaaccaccggcgcacag
cccgcgggccgccagtggccctgtcatcctgcgctcccctcggccccgcctcttaagggc
gagctggagctcgatgacggcgtgttcgacagcatccttaaagacctggacgtggacgtg
ggcgcggggaaggaggactttcccccgccgggcgttgcggcgttcgggtaccagcagggt
ctgctgcgctgcaggatggggtctcacgagtcggagccggagcctctgggcctctccccg
accatcgcagaggacccgctgcccgcagagcagttcatcgccgtggaacccttcagtttg
cagttgggacgccatgaccgaaacactgggttgcatcaactcaaccgctatatgcagagt
caccttcagcaaggtgaacttgcagaagaaaacttgtactga
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