Pungitius pungitius (ninespine stickleback): 119214667
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Entry
119214667 CDS
T07626
Symbol
valopa
Name
(RefSeq) vertebrate ancient long opsin a
KO
K04256
c-opsin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppug01009
]
119214667 (valopa)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ppug04030
]
119214667 (valopa)
Protein phosphatases and associated proteins [BR:
ppug01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119214667 (valopa)
G protein-coupled receptors [BR:
ppug04030
]
Rhodopsin family
Vision
Opsin
119214667 (valopa)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srx
7tm_4
Motif
Other DBs
NCBI-GeneID:
119214667
NCBI-ProteinID:
XP_037322464
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All DBs
Position
13:14433771..14446838
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AA seq
384 aa
AA seq
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MDTLSLSVNAVSYTVAAEPPATHDPFNGPIENIAPWNFTILAVLMFVVTSLSLSENFLVM
YATFKYKQLRQPLNYIIVNLAIADFLVSLTGGVISFLTNARGYFFLGKGACVLEGFAVTF
FGIVALWSLAVLSFERFFVICRPLGNIRLQPKHAILGLLFVWTFSFIWTFPPVLGWNRYT
ISKIGTTCEPDWYSTNMIDHSYIITFFATCFILPLGVIFFCYGKLLRKLRKVSHGRLATA
KKPERQVTRMVVVMIVAFMVGWTPYAVFSLLVTSHPSIKLDPRLASIPAFFSKTAAVYNP
IIYVFMNKQFRKCLIQLFSGRGTIPDGHLDQTSERPGMSQTGEMSAIATHIPMSSTVSPR
SDDSPTDCVSFAHLPIPENKVCPM
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggatactttaagtctgtcagtgaacgcagtgtcctacactgtggcagccgaaccgccc
gccacccacgatccgtttaatggacccatcgagaacatcgcgccgtggaacttcaccatc
ctggcagtgctcatgtttgtggtcacctcgttgtccctgagcgaaaacttcctcgttatg
tatgccaccttcaagtacaaacaactcagacagcccctgaactatattatagttaatttg
gccatcgctgacttcctggtctctctcaccggtggagtaataagtttcctgacaaacgct
cggggttatttcttccttgggaagggcgcttgcgttttggagggctttgctgttactttt
ttcgggatcgtggccctgtggtctctcgccgtgctgtcctttgaacgtttcttcgtgatc
tgccggcccctggggaacatccgacttcaaccgaaacatgccatcctgggtctgctgttc
gtctggaccttctccttcatctggaccttccctccggtgctgggctggaacagatacacc
ataagcaagatcggaaccacctgtgagcccgactggtattcaaccaacatgatcgatcac
agctacatcatcactttcttcgccacctgcttcattctgcctcttggagtgatattcttc
tgctatggaaagctcctgcggaagctcaggaaggtgtcacatggtcgactggccactgcc
aagaagccagagaggcaggtgacccggatggtggttgtgatgatcgtggccttcatggtg
ggctggacgccgtacgcagtcttctctctgttggtcacatctcacccgtccataaaactt
gaccccaggctggcttccatccccgccttcttctcaaagacagctgctgtctacaaccca
ataatctacgtcttcatgaacaaacagttcaggaagtgcctaatccagctctttagtggc
agaggaaccatcccagatggccacctggaccagacctccgagcgacctggaatgagtcaa
acgggagaaatgtcagctattgccacgcacatccccatgagtagcaccgtgtcgcccagg
tccgacgattctccaaccgactgtgtctcgtttgcccatctgcccatcccagagaacaaa
gtgtgtccaatgtga
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