Pungitius pungitius (ninespine stickleback): 119214962
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Entry
119214962 CDS
T07626
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119214962 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119214962 (zgc:163098)
Spliceosome [BR:
ppug03041
]
Complex A
U2 snRNP components
U2 related factors
119214962 (zgc:163098)
Complex B
119214962 (zgc:163098)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Surp
CID
cwf21
RRM_1
CTK3
Motif
Other DBs
NCBI-GeneID:
119214962
NCBI-ProteinID:
XP_037322557
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Position
16:13819692..13829612
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AA seq
873 aa
AA seq
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MADRKGKPVTAIKTLSKREQEDHKKKEEEKAAEVFEEFLASFETSEKSGVKTFVRGGIVN
ATKEEEAAEVKKNKLYRPAGKFVPVSQHVSPVSFAESKKSTFKKKAEEKKKSNLELFKEE
LKLIQEEREERYKKKKNDGGGGGGGFAELDTPLSGRSVLYDDLTVPTTTNLYISCISPKM
NEEILCKEFGKYGPLASVKIMWPRTDEERCRTSNRAFVAFMTRKDAERALSSLDGKVIMG
FEMKLGWGKPARIPPQPLYTPAGVRVTPPPPSGLPFNAQPRDRFRNDFTKPLGMSKGELD
KTLSEAVVKVVIPTERNLLFLIHRMIEFVVREGPVFEAVIMNKEKSNPDYRFLFDNKSQD
HVYYRWKLFSILQGQSPTEWRTTDFRLFRGGSMWRPPILNNYSQRDEDRADAEEAAPPEE
EVKKGQLRAEHKLRLETLLKELTPSREDVASAMLFCLERADAAEEVVGHITESFSLLQTP
LQKKIARLYLVSDILHNSCAKVAGASYYRKYFETKLTQIFGDLNAAHKNIQARLQAEQFK
QKVTSCFRAWEDWAIYPEPYLIHLQNIFLGFAKAVEELKEPAEEVSVFIDGAPIDGLPLH
RDPADDLDGCPLGWDPLDGVPVDDLDGVPLAVAMDDIDGMPLEESNVPLSRVPLSKWERT
ADTGTFSQAKAESKWDMVVEPNSEAEVNVSVNSQDGDEDSQSDSSDDSSRLSKYESADFQ
SSLKSFQMSESKRKRLRELEVKVMKAQDELESGKRTRKSGMSIQQQVEHYRNKLLQKEFE
KDEDKSEKRSKDKSKDERKDKDRSKRSEDGVRRRGRSRDPDERPRRSRSVSPLKTKSPKW
SKHSRSPSPNRKTVKSRSRSPHRSHKKAKKSKH
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggcagatagaaaaggaaaacctgtcactgcaatcaaaacactgtcaaagagagaacaa
gaagaccacaagaagaaggaggaagaaaaagcagcggaggtttttgaagaattcttggcg
tcctttgagaccagcgagaaaagtggagtgaaaacttttgtccgtggtggaattgtgaat
gcaactaaagaggaagaagcagcagaggtaaagaaaaataagctgtatcgacctgctggc
aagtttgtccccgtgtcccagcatgtctcaccggtatcatttgctgaaagcaagaagtct
acatttaaaaaaaaggccgaagaaaagaagaagagcaatcttgaactcttcaaagaagaa
cttaagctaatacaagaagagcgagaggaaagatataaaaagaagaaaaatgatggtggt
ggcggaggaggaggatttgcggaactggacacgccgctatcaggacggtcagtgttatac
gatgacctgacagtgccaaccaccactaacctctacattagctgcattagcccaaagatg
aacgaggagatcctctgcaaagagtttggtaagtatggtcctctggccagcgtgaagatc
atgtggccccgaacagacgaggagcgctgcaggacgtccaaccgagcctttgtggccttc
atgacgcggaaggacgcggagagggccttgtcttcacttgatggtaaagtgatcatgggg
tttgaaatgaagctcggctggggcaaaccagcacggattccgccccagcctctctacacg
ccggcgggggtgcgggtcaccccaccgcccccgtcgggcctccccttcaacgctcagccg
agagatcgcttccgcaatgacttcaccaagccgctcggcatgtccaaaggagagctcgac
aagactctgtccgaagccgtagtcaaagtggttatcccaaccgaaaggaacctattattc
ctcatccacaggatgatagagtttgtggtgcgtgaaggccccgtgttcgaagcggtaatc
atgaacaaggagaaaagcaacccggattacaggttcctctttgacaacaaaagccaagat
catgtgtactaccgctggaaactcttctccatcctgcagggtcagtccccgaccgagtgg
cgcaccacagactttcgcttgttccgggggggctccatgtggagaccccccatcctaaac
aactactctcagagagatgaagaccgggccgatgcggaggaggctgccccccctgaggag
gaggtgaagaaagggcagctcagagcggagcacaagctgaggctggagacgttgctgaag
gagctcacgccgagcagagaagacgtcgccagcgccatgctgttctgtctggagcgagca
gacgcagcagaggaagtagtgggacacatcaccgaatctttttccttactccagacgccc
cttcagaagaagattgccagattatatctcgtgtcagatatcttacacaactcgtgtgcc
aaagtagccggcgcatcatattatcgtaaatattttgaaacaaagctaacgcagatattc
ggagaccttaacgcggcgcataaaaacatacaagccaggctgcaggcagaacagtttaag
caaaaggtcacaagttgctttagagcatgggaagactgggccatatacccggagccttat
ttaatccaccttcaaaacatcttcctgggcttcgccaaagctgtggaggagttgaaagag
ccagcagaggaagtgtccgtctttatcgacggcgcgcccatagacgggctgcctctgcac
agagaccccgcggatgacctggacggctgccccctgggctgggaccctctggacggagtc
cccgtggacgacctagacggcgtccccttggcggtggccatggatgacatcgacggaatg
cccctggaggagagcaacgttcctctctccagagtgcctttgtccaagtgggagaggact
gctgataccgggacattttctcaagccaaggccgagtccaagtgggacatggtggtggag
ccaaacagtgaagccgaggtgaatgtaagtgtcaactcgcaggacggagacgaagactcg
cagagtgacagtagcgacgactccagcagattgtccaagtatgagagcgcagatttccag
agctccctcaaaagttttcaaatgtctgaaagcaaaaggaaacggttgagagagctggag
gtgaaggtcatgaaggcccaagacgagctggaatccggcaaacggacgaggaagtccgga
atgagcatacaacaacaagtggagcactacaggaacaaactgctccagaaggagtttgaa
aaagatgaagacaagagtgagaaaaggtctaaagacaagtccaaggatgagagaaaggac
aaagacaggagcaaacgaagcgaggacggagtccggcggcgcggccgcagcagggatccc
gacgagcgcccgcggaggtcgaggagcgtctccccgttaaagacaaagtctcccaaatgg
tccaagcattcccggtcgccatccccgaaccggaagacggtgaagtcgaggtcgcggtcg
ccgcatcgttcccacaagaaggcaaagaagagcaaacattga
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