Pungitius pungitius (ninespine stickleback): 119215001
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Entry
119215001 CDS
T07626
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04141
Protein processing in endoplasmic reticulum
ppug04210
Apoptosis
ppug04217
Necroptosis
ppug04218
Cellular senescence
ppug04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119215001
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119215001
04217 Necroptosis
119215001
04218 Cellular senescence
119215001
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119215001
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119215001
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
119215001
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C2: calpain family
119215001
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
AIF-1
Motif
Other DBs
NCBI-GeneID:
119215001
NCBI-ProteinID:
XP_037322625
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All DBs
Position
16:10406023..10411676
Genome browser
AA seq
710 aa
AA seq
DB search
MALPGRCTSIINLRYQDGSEGSPSNPAKFNNQDYAQLKDNYLRRRTLFVDNTFPPNNQSL
GDLRDFGRRQEAQVEWLRPADILKAQKKSVDPIFCSKGASRFDFDQGSVGDCWLLAAISS
LTFRKGLLAQVVPMDQNFSDYAGIFHFRFWRFGVWVDVVIDDYLPTLNNQLMFVRSKDGN
EFWAPLMEKAYAKVCGSYADMSSGLPSEACKDFSGGLNMDYKLSEAHSAGHDVELWNSLS
RATSCQSMICCGTAQKGGELVNTIEDTGIVNAHAYSVTAVTEVDYCGSKVKLVRLMNPWG
RTEWNGKWSDKSDMWSKVSPEDRKNFVDCNDGEFWMELGDFCHYFQNLFICCENPNFIDG
DISCQWKSMTYDGSWVAGKTAGGNLSYSTFETNPQYRLQVTKINKDEQNDQNIFLSLMQK
PQKQNRKTTQTQPIGLTVFKIPPGTPQGQLKASFFLRNWPMKQRQLYTNERDLIDSYSLE
PAEYLIVASTIKPNMTGDFVLTVYTKTDAQISSHEDDGDHKEEENLILPMPPKDKDKDKD
KDKEETTNKNTIQALFSRYADQFGRLVSRQLQKLLNDNFPHGTFGLDTCMSMMAMVDTNK
TMMMTFTEFSTLWEKITKYEKRFHLADVNENGSLSERELQKAMEDEEMDTNDFMVKLMMA
RYSGTSNTSLENFITLMLRLEKTSNVFKNKSSNGVIHLSWTEWTNFSLYN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggctctacctggaagatgcacctctatcatcaacttgcgttaccaagatggcagtgaa
gggagcccgtccaacccggccaagttcaacaaccaagactatgcgcagctgaaagacaac
tacctgcgcagaaggacgctgtttgtggacaacaccttcccacctaacaaccaatctctg
ggggacctgcgtgatttcggccgtcgtcaggaagcccaagtggagtggctccgtccggcg
gacatcttgaaagcacagaaaaaaagcgtggatcctattttctgtagcaaaggagcctcc
cgatttgactttgatcaaggcagcgtgggtgactgctggttgctggctgcaatttcctca
ctgacgttccgcaaaggcctgttggctcaagttgtgccgatggaccagaacttcagtgat
tacgccgggatatttcatttcaggttctggaggttcggcgtgtgggtggatgttgtcatt
gatgactacctgccaacactgaacaatcagttgatgtttgttcgctccaaggacggaaac
gagttctgggctcctctgatggagaaagcttatgccaaagtgtgcggttcgtacgcagac
atgagctctggattgccatcggaggcctgcaaggatttcagtggaggcttgaacatggat
tacaaactcagtgaagcccactcggcaggccacgacgtggagctgtggaactcgctgagc
agagccaccagctgccagtcgatgatttgctgtggtactgcccagaaagggggggagttg
gtgaacaccatagaggacactggtattgtgaatgcacatgcctattctgtgacagcagtc
actgaggtcgattactgcggttctaaagtgaaactggtgcgtctcatgaatccttggggc
cgaacagagtggaacggaaagtggagcgacaagtctgacatgtggagtaaagtcagtcca
gaagatcggaaaaactttgttgactgcaatgacggagagttctggatggagttgggggac
ttctgtcattatttccaaaacttgttcatctgctgtgagaaccccaactttattgatggt
gacatcagctgccagtggaaatccatgacttacgatggcagctgggtggccggaaaaact
gcaggcggcaacttgtcttactctacctttgagacgaatccccagtatcgcttgcaggtt
actaaaataaacaaggatgagcaaaacgaccaaaacatcttcctgtctctgatgcagaaa
cctcagaaacaaaatcgtaaaacaacacaaacccaaccgattggacttaccgtctttaag
attcctccagggacaccacagggacagctgaaggcctccttcttcctaagaaactggccc
atgaagcaaagacagctgtacaccaatgaaagggatctgattgattcgtacagcctggag
cctgccgagtatctgatcgtggcctccacgatcaagcccaacatgactggagacttcgtt
ctcaccgtctacaccaagaccgatgctcagatcagctcccatgaagatgatggcgatcac
aaagaggaggagaacttaattcttcccatgccgcccaaggacaaggacaaggacaaggac
aaggacaaggaggagaccaccaacaagaataccatccaagccttgttcagcagatacgct
gatcagtttgggcggctagtatccagacagctccagaagctcctgaatgacaacttccct
cacggcacctttggtttggatacctgcatgagcatgatggctatggtggataccaacaaa
acaatgatgatgactttcaccgagttctcaactctctgggagaagattaccaaatacgag
aaacgctttcatcttgcagatgtgaatgagaatggatccctgtctgaacgtgagctccag
aaggcaatggaggatgaggaaatggacaccaacgacttcatggtaaagctgatgatggcc
cgctattcaggcacgtccaacacctccttggagaactttatcacgctcatgttacgcctg
gagaagacctcaaatgttttcaagaacaaatcatcaaacggagtgatccacttgtcctgg
actgagtggaccaacttctccttgtacaactag
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