Pungitius pungitius (ninespine stickleback): 119215038
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Entry
119215038 CDS
T07626
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119215038 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppug01009
]
119215038 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119215038 (ncor1)
Protein phosphatases and associated proteins [BR:
ppug01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119215038 (ncor1)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
119215038 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
DapB_C
Motif
Other DBs
NCBI-GeneID:
119215038
NCBI-ProteinID:
XP_037322686
LinkDB
All DBs
Position
16:5821043..5866921
Genome browser
AA seq
2442 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQGRYPQHSVQYTFSGSRHQQDFTVPDYRTHMQDAQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSMSAQSEHDSLDAKRPRMETVVEGHISRAPPTAGGVVL
PMTHSVQDGLRNAAEVKKESQFSVKEESRSSGGHPLHMGDDQDASPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKA
EEAHKVLEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQNI
CQRYDQLMEAWEKKVERMENNPRRKAKDSRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDP
MKVYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLYYYLTKKNHNY
KTLVRRNYGRRRGRNQQITRPSQEEKSDEKNEEEKTEKSEKKEDEEKKDEEEKDDKEDPR
DIGKDKEKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAATVAAEEGAPAA
PEPALPDPPQPPKSDPMQKSMKEPAKPQTPVSSMDTNKAGETGESSRWTEEEMEVAKKGL
VEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSHGEGLA
SASPDDDDDDDNADDSDGGDNSSDTESAPSPSQSGDSKRADSTPRDAHCSDQDKGQTSNG
KAPEPLYRGLCVKEEKSPESETGSQEEKGRMASYAAPVHPKTEPQDVDLKTGEVQIKMEP
DIKERGEKGDHGERNSELHSDNDSSATCSADEDVEAESERQRIFSMDKPTLLNPPGSVLV
SSPKQTQLNIQQMQQRAANIPPMVPGPFGPGGVPISGFAMLQHQIKAVHESAHQEEKQRQ
DQGDPERRAPFNTRSPSVIDRDGKALPYMPYDMKLSLDQEVHSCRPGSPYRLSPRELSKA
SPQPDPNSSRYSVPPVLHPAANQLVQSMTDGVRVTFSRPSRPPNIPSPPPLIPTTKPTDK
PSFIQGGSISQGTPGTYLTSHSVYGPEGTKSTVGSISLGLPRQQDPNKPGGAVSSMQDGR
GNPSKMGEGLTMRGSITQGTPAHSQPSIAADLLKGTITKLTTEDLNNPDKSRGEQLSKGH
VIYEGKSGHILSYDAIKNPRENTRSPRAGHELKRTYDMMEGPMGRGHPGREGAPFEGLIS
RALPREGPHGEPKERPLITGSIMQGTPRTAAETYEDAMKYGKQIKRESPPIRSFEGGIGK
GKPYEGVNTIKEMGRSIHEIPRQDQPGQDLCKTPDLSERRVIEGSMSQIHPLNQSTIKHN
VKSLITSPSKLPHNMPQLEAMERAKYEEGKAVRHTVVNSTGSVLRSTHQEASKSQLSPSM
YEDANARRTPLNYSTNPVSRGSPMLGRGPEGVLSSVKPAAHERKSTITPTQRDNVPAKSP
VLGGDPHPGSSHSPFDPHHRPVGPGEVYRPHLPPHLDPAMAMTLHRGLDPAFMFPRQQSP
TGYHNTYQLYTMENTRQTILNDYITSQQMQVIRPDMARGLSPREQPGAIPYAAGARGIID
LAQMPPTILLPHPGGTGAPTLERIAYLPGAQPPFPPRAFNPTSISPGHQAHLAAAANVER
EREQRDWEQRDREQQDKEREKEREREHREREREMRERTNEYLRGGGPEQPGRPGSRGYLH
SPSPSLRTQDVVVQQRPSIFQGKSVITALIPHSAAASAAAQSSSRYSTAADALAALVDAA
AAAPQMDVAKVKESKHERDDNMSSSTASRRAASLSEQQQQQQQQQQQQQQQEAERRSMQS
PYGVMSLPGGKPHPVYSEAPGVGNKDKGPQTSKSRIEEELRTRGKTTITAANFIDVIITR
QIASDKDSRERGSQSSDSSSSLSSSRYENPGGGAIEVISPASSPVQPQQEKSEEGQQKAA
SMNTPTPFEHMIFSTGMRGYDMSRYRSSGEPPQPPSSQIEGYSQVTKTHRVMTLADHISH
IITQDFARNQDPPPVSSSSAPFQSTAPHVSSSGRSKMPSRYSPENQVSAAHHQRPSSRVS
PENASDKLRSRPGKSPERGVRQMEHYEPISPPQSYQGMDKPETTGPPPQRREAENPEIRN
DSRSPGSGSYLPAFFTKLENTSPMVKSKKQEIFRKLNSNSGVGDSDVGNAQPGTEIFNLP
AVTSSSSINPRSHSFSDPASNLGLEDIIRKALMGNLEERQEEHQGGVGAHGALSNTPGQG
SDTRQEANPSPSMATGKQKHSKASTRKSKSPNLGQAYAGGERPSSVSSVHSEGDYHRQAQ
PQWGWDDRPSSTGSMQFPYNPLTMRILSSTPPTSMASPSMQQHQHQLQHHNQQQQQQQQQ
QQQQQQQQQQQLQPPPAGAPVAQQRVWSLLSEQYETLSDSDD
NT seq
7329 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccccccagccaggggagcttcagcagcgagcagggccgg
tacccgcagcattctgtccagtacacgttctccggctcacggcaccaacaggatttcacc
gtccctgactatcggactcatatgcaagatgcacagggtcggaggagaccctctttactg
tctgaattccaccctggaactgaaaggcctccagagaggcgccatggttacgaacagcag
tttcactccatgtcagcccagtcagagcatgactccttggatgctaaacgccctcgcatg
gagactgttgttgagggccacatcagtcgcgcacctcccactgctgggggtgtagtcctg
cccatgacccactcagtacaggacggtctgagaaacgctgccgaagtcaaaaaggaatct
cagttctctgtcaaagaggagtcccggtcttcaggaggacatcctctacacatgggcgat
gatcaggatgcgtctccttccaaactatccaaagaggagctgatccagagtatggaccgt
gtggacagagagattgcgaaggtggaacagcagattttcaagctgaagaaaaagcagcaa
caacttgaggaggaagcagcaaagccagtagagccagagaagccagtgacccctccccca
gtggagcacaagcatcgcagcatagtccaaatcatctacgacgagaacaggaaaaaagct
gaagaggcccataaagtactggaaggtcttggtcctaaggttgagctgcctctctacaat
cagccatcagacacaaaggtgtaccatgacaacatcaagaccaaccaagtcatgcggaag
aagctgattttgttttttaagaggaggaaccatgcgcgtaaacaaagggaacagaatata
tgccagcgctacgaccagctgatggaagcatgggagaagaaggttgagcgaatggagaac
aaccccagacgcaaagccaaggacagcagaacacgggagtactatgaaaggcaattccct
gaaatccgcaagcagagagagcagcaggaacgcttccagagggttgggcaaagaggaacg
ggcctttctgcaacaattgccagaagcgagcatgagatctctgaaatcattgatggcctt
tctgaacaggagaacaacgagaaacagatgagacaactgtccgttattcctcccatgatg
tacgactcggagcagaggcgagtgaagttcattaacatgaacggcctgatggacgacccc
atgaaagtttacaaagcccggcagttcatgaatgtttggaccgaacacgaaaaggagatc
tttaaggagaaatttgtccaacaccccaagaactttggcctgattgcctcctacctggag
agaaagtgtgtggctgactgtgtcctttactactatttgaccaagaagaaccacaactac
aagacgctggtgaggcgaaactatggaagacggagaggaaggaaccagcaaataacgcgt
ccctcacaagaagaaaagtctgacgaaaaaaacgaagaggagaaaactgagaaatcagag
aaaaaagaggacgaggaaaagaaggacgaggaagagaaagatgataaggaagatcctagg
gacattggcaaggacaaagaaaagtgtgacggtggggaggacgaggacggaaaggagcag
aacacgccgcgtggcaggaagactgccaacagccagggccgacgtaagggaaggatcacc
acacgctccatggccaatgaggccgcaactgtggcggctgaggagggtgctcccgccgcc
cctgagcccgccttgccagatcctccacagccccccaagtctgatccaatgcaaaagtcc
atgaaggagcctgccaaaccccagactccagtatcttccatggataccaataaagccggt
gaaaccggagaatcttctcgctggaccgaggaggagatggaagtcgccaagaaagggctt
gttgagcatgggcgaaactggacagccattgccaaaatggtgggcaccaaaagcgaggca
cagtgcaagaatttctatttcaactacaagagacgtcacaacctggacaacctgctccag
cagcataagcaggacacacggcgggcacgtgctgatcggtctcacggtgaaggtcttgcc
tcggcatcacctgatgatgacgacgatgatgacaatgcagatgacagtgacggtggcgac
aacagctctgatacagagagtgcgccgtcaccctctcagtctggcgactccaagagggcc
gacagcactccaagagatgctcattgctctgaccaggacaaaggtcaaaccagtaatgga
aaggccccggagcctttatacagagggctctgtgtcaaggaagagaaaagcccagagagt
gagacaggatcgcaggaagaaaagggcaggatggcttcctatgcagccccagtgcatccc
aagactgaacctcaggatgttgacttgaagactggagaggttcagatcaagatggagcct
gacatcaaggaaagaggcgaaaagggagatcatggtgaaaggaacagtgaactccactca
gataatgactccagcgccacctgcagtgctgacgaggatgtggaagcagagtccgaaaga
cagagaatattctccatggacaagcctacattgctcaaccctccaggctctgtgttggtg
tcttcacccaagcaaacccaactcaacattcagcagatgcagcagcgggctgccaacatc
ccccctatggtgccgggccctttcggccccggtggtgtgccaatcagtggctttgccatg
ttgcaacaccagatcaaagccgtgcacgagtcagcacaccaagaggagaagcagaggcag
gatcagggagacccggagcgcagagcgcccttcaacacacgcagccccagcgtgatagac
agagatggtaaggccttaccctacatgccttatgatatgaagctctctctggaccaggag
gtccactcttgtcgaccaggctctccctacagactctcccccagggagctgagcaaggcc
tcaccgcagccagaccccaattcctcccgctacagtgtgccgccagtcctccaccctgcc
gctaaccagctggtgcagagtatgacagatggagtccgcgtgacattcagcagacccagt
cgacctcccaacattccctccccgcctcctctcattccaaccaccaagcccacggacaag
ccctcctttatccagggtggctccatctcacagggaactcctggcacatacctgacgtcc
cattctgtatatggtccagaggggactaagagcacagtgggctccatctctctgggtctg
cctcggcagcaggatcctaacaagcccggaggtgccgtttcatccatgcaagacggcaga
ggcaacccatcaaagatgggcgagggtctgacgatgagaggatccattactcagggcaca
ccggcccattcacagcccagcattgctgctgacctcttgaagggcactatcacaaagttg
accacagaggacctgaacaacccagacaagtcaaggggagaacagctctctaaaggtcat
gtcatctacgaaggcaagagtggtcacatactctcgtatgatgctatcaaaaaccccagg
gaaaacacccgcagccccagagcaggccatgagctgaaacgtacctacgacatgatggag
ggaccaatgggcaggggacacccaggcagggaaggagcaccatttgaagggttgatcagc
agagccttgccaagagaaggtccacatggagagcctaaggaaagaccattgatcacagga
tctatcatgcaaggcacacctagaacagccgcggagacatatgaagatgccatgaaatat
gggaaacagataaagcgagagagcccaccgatccgctcctttgaagggggcatcggaaag
ggaaagccctatgagggagtcaatactatcaaagagatgggacgctccattcacgaaatc
cccagacaagatcagccgggacaggacctctgcaagacccctgacctgtcggaaaggaga
gttatagagggctccatgtctcagattcaccctctcaaccagtctactattaagcacaac
gttaagtccctaatcaccagtccgtctaagcttccccacaatatgccccagcttgaggcc
atggaacgcgccaagtacgaggagggaaaggcagttcgccacaccgtggtcaactccacc
ggttctgttctgcgctccactcatcaggaggccagcaaatcccaacttagccccagcatg
tatgaggacgctaatgctcgcaggacccccctcaattacagcaccaatcctgtgtccaga
gggtcacccatgttgggacgtgggccagagggtgttttaagctctgtgaaacctgctgct
catgaaagaaaaagtacaatcacaccaacacagagagacaatgtcccagcaaagtctcca
gtgttgggtggtgaccctcatccaggatcctcccacagccctttcgacccccaccaccgg
cccgtcggtccaggggaagtatacagaccccacctgcctccacatctcgaccctgccatg
gctatgacgctccacagagggctagatcctgcgttcatgttccccaggcagcagtctcca
acaggctaccacaacacctaccagctgtacaccatggagaacacacggcagacgatcctc
aatgattatatcacctcccagcagatgcaagtcatccgacctgacatggccagagggttg
tcaccacgggaacagcctggcgctatcccttacgcagccggggctcgagggattattgat
ctagcccagatgcctccaactatcctgttgcctcaccctgggggaacaggtgcgcccact
ttggaacgcatcgcctacctccccggtgctcagccccctttccctcctagggctttcaac
ccaacctccatatcgccaggccaccaagcccaccttgctgctgctgccaatgtggaaagg
gaacgggagcagcgggattgggagcagagggacagggagcagcaggataaagaaagagaa
aaggaaagggaaagagagcaccgagagagggaacgggaaatgcgggagagaaccaatgaa
tacctccgtggaggtggaccagagcagccaggacggccaggaagtcgaggttaccttcac
tccccttctccctcgctcaggacgcaggatgttgtggttcagcagcgacctagcatcttc
cagggcaagagtgtcatcactgctctaataccccattcagcagcagcgtctgcagcagca
cagagtagctcgcgctacagtactgcggctgatgctctggctgctctggtggacgccgct
gccgctgccccacagatggatgtggccaaggtgaaggagagcaaacacgaacgggatgac
aacatgtcttcgtcgactgcgtctcggcgagcggctagcctctccgaacagcaacagcag
cagcagcagcaacaacaacaacaacaacagcaggaggcagagaggcgatctatgcagtct
ccatatggcgtcatgtctctgccagggggtaaaccccatccagtttactctgaggcccct
ggagttgggaataaggacaagggccctcaaacctcaaagtcccgcatcgaggaggagctt
cggacacgtggaaagacgaccatcacagccgctaacttcatagatgtcatcatcacacgg
cagatagcctcagacaaggactcacgagagcgaggctctcagagttctgactcctcaagc
agcttgtcatccagtcgatacgaaaaccctggcggaggagccattgaggtgataagccct
gctagctccccagtccagcctcaacaggaaaaatccgaggaagggcaacaaaaggcagca
agtatgaacacaccaactccgtttgagcatatgatattttcgactggcatgcggggatac
gatatgagtcgttaccggtcgtcgggggagccaccccagcccccgtcctcccagattgag
ggctactcccaggttaccaagactcacagggtcatgaccttggcagaccacatttcgcat
attataacccaggacttcgcccggaatcaggaccctcctcctgtctcctcatcttcggcc
ccattccagagcacggcaccacacgtttcctcttcagggcgatccaagatgcccagccgc
tacagtcctgaaaatcaagtctcagctgcacaccaccagagaccttccagcagagtttcc
ccagaaaatgcctctgacaagcttagatcgaggccgggtaaatctccagagcgtggtgtc
aggcagatggagcattatgaacccatctctccaccacagagctaccaaggcatggacaaa
ccggagacgaccgggcctcctccgcagaggagagaggccgagaaccctgagatcaggaat
gactcgcggtccccagggagcggcagctatctgcctgccttcttcaccaagctggagaac
acttcgccaatggttaaatcaaagaagcaggagatctttcgtaagttgaactccaactct
ggtgttggtgattctgatgttggaaacgcacaaccgggcacagagattttcaacttgcct
gcagttaccagctcaagcagcatcaaccccaggagtcactcatttagtgacccggccagt
aacctgggcctggaggacatcatccgcaaagccttgatgggtaacttggaggagagacag
gaggagcaccagggaggagtaggggctcacggggccttgagcaacacacccggccaaggc
agcgacacacgccaggaggccaacccgtcacccagcatggccacagggaagcagaagcac
agcaaagccagcacccggaaatccaagtcccctaaccttggtcaggcctacgccggaggg
gagcgtccgtcttctgtgtcctccgtccactcagagggagattatcacagacaagcccaa
ccccaatggggctgggacgatcgaccttcgtccacaggatccatgcagtttccttacaac
ccgctgaccatgcgcatactgagcagcacgccacccacctccatggcttccccctccatg
cagcagcatcaacatcaactacagcaccacaaccagcagcagcagcaacagcagcagcag
cagcagcagcagcagcaacaacaacaacaacagctgcagccgcctccagctggagccccg
gtggcccagcagcgtgtgtggtctttgctatcagagcaatacgagaccctgtctgacagc
gacgactga
DBGET
integrated database retrieval system
