Pungitius pungitius (ninespine stickleback): 119215117
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Entry
119215117 CDS
T07626
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119215117
Ion channels [BR:
ppug04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119215117
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
YVC1_C
Motif
Other DBs
NCBI-GeneID:
119215117
NCBI-ProteinID:
XP_037322872
LinkDB
All DBs
Position
16:8655254..8665524
Genome browser
AA seq
1020 aa
AA seq
DB search
MENLTPEQWREIMSRKMRFPPELIGAIQEGKIELLCGLLKTGDGIIRQLDESEDRQWREA
LNLSIRLGNESCMDVLLQGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSQAIFDHSIDNSQFAPGVTPLTLACQKDLYDIVTMLTKKGHVIPWPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSEDAMLRAFSLSRELRKLSQKEPEFKPEYL
GLEELCQEFAVELLGMCRNQSEVTTILNSCGDESQDSLEEQAFEEGIPNLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGNLAGWRGSRTAWKLLVSVGIFFTMPFLCLVYWIAPKSKFG
KVIKTPVIKFLLHSASYLWFLITLLGESITMEIHQGKFSSREQNMLHSSFHMVWVVGFFW
YECKEVWIEGLRGYFLDWWNCLDVMVLSMYLASFALRLLIMLKGHFLCHDLDGTEECIYF
TQTERKDWLQEDPQLIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYAISPHLGRFNETFHFLFWTMFGVANQDYVDMPEFMLAEF
VGRVLYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTIPV
PFNIIPSPKAVFYLLRCIFRQICCCCTFNSENKYPDLAAMTNDKVSEGSELPYRQQVIRA
LVQRYIESARREFEETKRKDIGNRITLLTKTVTRMHSDIKVLHQVLMDDGHAASDLSAKD
GSSFLGKYITGAKNNFVGFNSKQDETSLEVTVHHGEGRFDTETPDSKQQQSVAQQSQVSE
CRAEGSQEVTDRDVMKMEEGRAKIEPGEENTKQVETDKNEVTEGVVAGRSFNHPEEQQKA
EDEAERRRKGEILTGGEVCEKHTETTSLRGQGIKVHKEETDAKKVANEVKDIELQERKVG
SEWMNDGAFEPDGAKKPGVRESNATPGAEKPVPSPTGSSSSSSHDTGFSSQEDDGATVTP
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctcacgcccgaacaatggcgcgagatcatgagcaggaagatgcggttccct
ccggagctcatcggcgccattcaggaggggaaaatcgagctgctgtgtggactgctgaag
accggcgacggcatcatccgccagctggatgagtctgaggatcgccagtggagggaagcc
ctcaacctgtccatccgcctgggcaacgagagctgcatggacgtcctcctgcagggggtc
aagtttgacttccggcagatccacgaggccctgctcgtcgccgtggacaccaaccagccc
agggtggtgaagcgcctgctggaccgcctggaccaggagaagggcaacaagatggacgtg
cgctccttctcccaggccatctttgaccactccattgataactcccagtttgcccctggt
gtgactcctctgacgttagcctgccagaaggacctgtatgacatcgtgaccatgctcacc
aaaaagggtcacgtcatcccgtggccacataagatatcctgtgcgtgtctggagtgtcgc
aacggccggcagtacgacctcctgaagttctccttgtctcgtattaacacctaccgtggc
atcgccagccgcgcctacctgtccatcacttctgaagacgccatgctcagagctttcagc
ctcagcagggagcttcgtaagctctcgcagaaagagccggagttcaagcctgagtacctg
ggcctggaggagctttgccaggagtttgccgttgagttgctggggatgtgtcgcaaccag
agcgaggtgaccaccatcctgaacagctgtggagacgagagccaggactccttagaggag
caggcctttgaggagggaatccccaacctgtcccggctgcgtctcgctgtcaactacaac
cagaagcagtttgtggcccacccaatctgccagcaggtgctgtcatccatctggtgtggg
aacctggctggctggagaggcagcaggacggcctggaagctgctcgtatccgtggggatc
ttcttcacaatgcccttcctctgcctcgtctactggatcgcaccaaagtcaaagttcggg
aaggtaataaagactcccgtgatcaagtttctcctccactctgcctcctatctgtggttt
ctcatcacgttactcggagaatcgataacaatggagattcatcagggcaaattttcctcc
cgggagcagaacatgctgcacagctccttccacatggtgtgggtggtcggattcttctgg
tacgagtgtaaggaagtgtggatcgagggcctgcgcggttacttcctggactggtggaac
tgcctggacgtgatggtgctcagcatgtacctggcctcttttgcgctacgtttgcttata
atgctcaaaggtcacttcctctgccatgacctcgacggcaccgaggagtgcatctacttc
actcagaccgagcgcaaggactggctccaggaggacccccagctgattgcagaggtgctg
tttgcggtgacgagcatgttgagcttcacgcgcctggcgtacatcctgccggcacacgag
tccctggggactctgcagatctccatcgggaagatgattgacgacatgatgaggtttatg
ttcatactgatgatcattggaactgccttcctctgtgggatcaacaatgtctatgttcct
tatgccatctctccacatctcggcaggtttaatgagacgttccacttcctcttttggacc
atgtttggcgtggccaaccaggattatgtggacatgccagagtttatgttggcagagttt
gtcggcagggtgttgtatggcatcttcacgctggtcattgtcattgtcctcctcaacatg
cttattgccatgatcaccaactcctttcagaaaattgaggacgatgcagatgttgagtgg
aaatttgccagatcgaagttgtaccttagttacttccgagaaggcctcaccattcctgtg
ccctttaacatcatcccctcccccaaagctgtgttttacttattaaggtgcatctttaga
caaatctgctgctgctgcacttttaattccgagaacaaatatcccgacctagccgccatg
accaacgataaggtatctgaaggcagcgagctgccttaccgccagcaggtgatcagagct
ctggtgcagcgctacattgagtcggcacgcagggagttcgaggagaccaagaggaaagat
atcggaaatcggatcactttgctgactaaaacggtcaccagaatgcacagtgacatcaaa
gtgctccaccaggttttgatggatgatggacacgctgcaagcgacctgtcggcaaaagac
ggctcctcctttctgggaaaatacatcactggtgccaagaacaatttcgtaggttttaac
agcaaacaagatgagacctcacttgaagtgacagtgcaccatggagaaggaaggttcgat
acagagacgcctgactcaaaacaacaacaatcggtcgctcaacagagtcaggtgagcgaa
tgcagagcagagggatcgcaggaggtaaccgatcgggatgtgatgaagatggaggaaggc
agagctaaaatagaaccaggagaagagaatacaaagcaggtggaaacagacaaaaatgaa
gtgacggagggagtggtggcaggaaggagttttaatcatccagaggaacagcaaaaggca
gaggatgaagcagagagaagaagaaagggcgagatactcacagggggggaggtgtgtgaa
aaacacacggagacgacctccctaagaggtcagggcatcaaagtccacaaagaggagacg
gacgcaaagaaagtggccaacgaggtcaaagacatagagctgcaggaacgaaaagtgggg
tcggaatggatgaatgacggagcgtttgaacctgatggagcaaagaagcccggtgtcagg
gagagcaacgcgacacccggagcagagaaacccgttccctcgccaacgggcagcagcagc
agcagctcccacgacaccggcttcagttcccaagaagacgacggggcgacagtgacgccg
tag
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