Pungitius pungitius (ninespine stickleback): 119215146
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Entry
119215146 CDS
T07626
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04517
IgSF CAM signaling
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119215146
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119215146
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119215146
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119215146
Intermediate filaments
Intermediate filament-binding proteins
119215146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
SLATT_6
Motif
Other DBs
NCBI-GeneID:
119215146
NCBI-ProteinID:
XP_037322930
LinkDB
All DBs
Position
3:16494163..16561698
Genome browser
AA seq
2703 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRQSSSGFWETECTSSKLFECSRIRALADERDAVQKKTFT
KWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLMWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRSDLIEFNKLTRSNATHNLQQAFNVA
EQHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLENCVEAE
KIVNRYEALASDLLDWIEKTIAVISNQKFANSLTGVQQQLLAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQCFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
VELAAEMETEAYYDIRRILARKENILGQWSLLKELVAGRRTRLEKNLALQKTFQDMVYMI
DWMDDTQVQLLSKDFGKHLLEVDDLLQKHGLQEADIAVQAERVETLNTAALKFTTIEGYQ
PCDPQVICNRVNHVSTCLEELKQLAAKRREELEESRQLWAFFQELEESEAWIREKSSILG
AQGYGKDLSSVLKLLQKHKTLAGELLAHRSLLQNTMKRGKQILSDKSFGTAGIQERIMEV
KGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLVAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHRGVSEAVDKHRMHVVALRKHMGALPLQYREQEEVQVRMGEVEQLYTEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLDKMEIPERLEDVEMVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSTEVRGCQDHLNSRWNNIVELVEQKKDQLDSMLRLQNYLL
ECAEIKSQIQEKRKAIDATQYVGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQEEAEQM
ATAHPARAMEVLMPFDGISVEWEELKRTLQGCEDSLMVAGRLQSFIQDLDSFLTWLVQTQ
TAAASDLLPNDLEEAEKLINKHAALKEEIGRYEEDYERLQAMNDLLESEEAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIKERIDTLANRGNQNRE
LAQRWLEKLNDQWELQRFLQDCHELGDWVCEKMLMAKDSSRDETQKLHKKWLKHQAFMAE
LAQNKEWLDKIEKEGQQLIQEKPELSAGVRRKLEEIRECWLDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLEGQLAYVDQGQDLTTVNKQLKKLHTMESQMETWYKEVGQLQMQ
VASIPQQTQIKETVAGRQAVVEARMVRLIEPLKERRRILLASKEVHQVGRDLEDEILWIQ
ERLPMAMSHEHGSSLQAVQQLMKKNQTLQRELQGHRSRMDDVLERAGIIASIRSPEADCV
RAGHDQLAQLWALLWAETERRQLILDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLVLEQTIEDYAETVGLLSQQCRQLLEMGHPDCEQISKRQCQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDYEHVTVLQEKFTEF
ASETGSVGQERVTAVNQMVDELIDYGHSDAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSNCREVLAQIEDKHRRLPEVRARQGSTANTSTLQRLLHSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMQLWKELLTSCEECRVQITTETDKLRFFGMVR
DQMMWMESIICQIGTGEKPRDVSSVEVLMNYHQSLQSEVEARSRSTLECIEMGKTLLAAR
NPAAEEIKEKLDKVVAKQYELSEKWDKHWDVLQQLLEVHQFAQEAVVAEAWLTAQEPLIS
SNELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLKAEQSKLPPTPLLGRK
VFLDPQDASPGVSTLPRLPLSPVMRQTIYEQNEANSPRSPSPATPTPSPSSVARRLGSTV
ANYTPVMNASSYRHALEARHGSVVGVAAGLGQPAPSSIASVATAAMLVSANQAREHDGAA
RDQVTKAMTYLHPAHAARTLEAKSSPYLRQAKIKHLDDAVTPLIVASRLEKAREKERARE
RDIIMGEIGTEKAEVAVMAEVVLQEPCRERLHSEPTRGPRRSRTDPLGQAEPQVQTHRDH
RIERQLSSEQLIQARRDELPQELWREQAERREKRGLERQTSSEHEGHGGHEGRRRERDRH
RLERQESSEHDTGKEHSDRRSGGGEKRSTMAEIVEQLQEREAAQARGEVPRLPNGVPEKP
ARLDRPRARDRPKPRRRPRPKEAGETTRRSRSAPAQSSPAVPQPPAHTAHHEGFLFRKLD
IESLKKSTNSRSWVNLYCVLNKGEMGFYKDAKNTATPYNNEALLNLSHCHCDVTNGYKKK
KNVFTLKTKDGSEFLFHAKDEEDLKVWVGNITGSITEHEDIAKWGQPQPTTSSTDEGTRR
DGSKAENRSERGGERSDRADRIEPAEKETEKETEKEKEKERGERSERGGKSDSKRSEKSG
KKK
NT seq
8112 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctcccctgacctggacaacgcggaagcccagcgccaactcaacaacaac
aaccgacaaagcagctcgggattctgggagacggagtgcaccagctccaagctgtttgag
tgctcccgcatcagagccctggcagacgagcgagatgcagtgcagaagaagacgtttacc
aagtgggttaactcccacctggcccgagtgtcctgtcgcatagccgacctctacaacgac
ctgagggatggatacatgctcaccagactcctggaggtcctcagtggagagctgctgcca
aggcctacacggggccgtatgcggatccactgcctggagaacgtagacaaagccctgcag
ttcctcaaagagcagcgagtccacctggaaaatgtgggctcccacgacattgtggatggc
aaccaccgcctcaccctaggccttatgtggaccatcatcctacgcttccagatccaggtg
atcaaaatagagacggaggacaacagggaaactcgctctgccaaggacgccctgctgctc
tggtgccagatgaagaccgcagggtaccctgaggtgaacatccaaaacttcaccacctgc
tggagagacggcctcgcctttaacgccctcatacacagacacagatctgacctgatagag
ttcaacaagctgacgcggtccaatgcgacccacaacctccagcaagccttcaacgtcgcc
gagcagcacctgggcctcaccaaactcctggacccagaggatgtcaacacagagaaccca
gacgaaaagtccatcatcacatatgtggtctcctactaccactacttctccaagatgaag
gctcttattgtggagggcaagagggttggcaaggtccttgaaaactgcgttgaggcggag
aagattgtcaaccgctacgaggccctggcctcggacctgctggactggatagaaaagacc
atcgcggtcatcagcaaccagaagtttgccaactcgctgacgggagttcagcagcagcta
ctggccttcacaacctactgcaccatcgagaagcccatcaagtttcaggagaaggggaat
ctcgaggtccttctgttcaccatccaaagcaagctcagagccaacaaccagaaaccctac
gtgcctcatgatgggaagctcatctcagacatcaacaaggcctgggagaggctagagaag
gcggaacacgaaaggggcgtcgctctgcgcaaggagctgattcgtcaggagaagctggag
ctgctggctcagtgcttcgatcacaaaaccaccatgagacaagcctggctcaatgagaac
cagcggcttgtgtcgcaggacaattttggctacgacctaccagcagtcgaggcggcaatg
aagaaacatgaggccatcgaggcggacattgcctcgtacgaagagcgcatcggcgtggtg
gtggagctcgcagcggagatggagacagaagcatactacgacatccggcgtatcctagca
cggaaagagaacatcctgggccagtggagtctactgaaggagctggtggccgggaggagg
actcggctggagaagaacctggccctgcagaagaccttccaggacatggtctacatgatc
gactggatggatgacacacaggtccagctcctgtccaaggactttggaaagcacctccta
gaggtggacgacctgctgcagaaacacggcctgcaggaagccgacatcgcagtgcaggct
gagagggtcgagacactcaacaccgctgcactcaaattcacaactatagagggttaccag
ccgtgcgacccacaggtgatttgtaaccgcgtcaaccacgtctctacctgtctggaggag
ctgaaacaactggcagctaaaaggcgagaggagctggaggagtcaagacagctgtgggcc
ttctttcaggagctggaggagtcggaggcctggatccgggagaagagctccatcctggga
gctcagggttacgggaaggacctgagcagcgtgctgaaattacttcagaaacacaagacc
ctggctggggaactgctggctcaccgctcgctgctgcagaacaccatgaaacgaggaaag
cagatcctgagtgacaagagctttggcacggcgggcatccaggagcgcatcatggaggtg
aagggcgagtggaagaggctggaggaccaggccgcgcagcgactcggacacctgcaggag
gcactcaactttttccagttctccacggagacggacgacctggtggcgtggctgcaggac
gcctaccgactggtttccagtgaagactttggacacgatgaatactccactcagtcgctt
ctgaagaagcaccggggggtcagcgaggccgttgataaacatcgtatgcacgtggtggca
ctgcggaaacatatgggagcgctgcctctgcagtaccgtgagcaggaggaagtgcaggtg
cgcatgggagaggtggagcagctttacaccgaggtggccgaggtggcggtgctcagacag
cagtggcttcacgatgccctcgccgtctaccgcatgttcagcgaggtcaacgcctgcgag
ctgtggatcgacgagaaggagcagtggctggacaagatggagatcccggagagactggag
gacgtggagatggtggcacacaggtttgagagcctagaccaggagatgaacagcctgatg
ggaaggatcctggacgttaaccagatagttcagcagctcctggatggaggtcatccttcg
tccacagaggtcagaggttgtcaggatcatctcaactctaggtggaacaacatagtggag
ctggtggagcagaagaaggatcagctggactccatgctgcggctgcagaactacctgctg
gagtgtgccgagatcaagtcccagatccaggaaaagagaaaagccatcgacgccacccag
tacgtgggcagcgacctggggggagtcctggctctgcagagacgcctctctactatggag
ggggccctatcggtcctggagcccaaacttctgcacctgcaggaggaggcggagcaaatg
gccacagcccacccagctcgggccatggaggttctcatgccgtttgatggcatcagcgtg
gagtgggaggagcttaaacgcaccctgcagggctgcgaggattcactcatggtggctggt
cggctgcagagcttcatacaggacctggactctttcctcacctggttggtccagacgcag
acggccgccgcttctgacctgctccccaacgacctggaagaggcggagaaactcatcaac
aaacacgcagcgctgaaagaggagatcggacggtacgaggaggactacgagcgcctgcag
gccatgaacgacctgctggagtccgaggaggctcccttacctcaagccgccctgcagcag
tggctccagaagctcgacgtcggctggaacaaactcctggagatgtgggagagccggaga
gaggttctggtccaggctcacatcttccacctcttcctgcgagatgtcaaacaggccgaa
tctttcctcaataaccaggagtcggcgctcgctcacgtggaacttcccaccacggtggaa
acggtggaggccgccatcaagaaacacaaagacttcaccaccaccatggagctgaacctg
cacagaatcaaagcagtgatcgaggccggggagagtctgattagccagagcaacatctac
tccgaccgcatcaaggaacgcatcgacacgctcgccaacaggggaaaccagaacagagag
ctggcccagcggtggctggaaaagttgaacgaccagtgggaacttcagaggtttcttcag
gactgccacgagctgggggactgggtctgtgaaaagatgctgatggcgaaggacagcagc
agggacgagacccagaagcttcataagaaatggctgaagcaccaggccttcatggccgag
ttggcccagaacaaggagtggctggacaaaattgaaaaggagggccagcagctgatccag
gagaagccggagctcagcgcgggggtccgaaggaagctggaggagatcagggagtgctgg
cttgacctggagagcaccacccaggctaaagcacgccagctctttgaggccaacaaggcc
gacctgctggtgcagagctacgaaagcctggaccagagactgggccaattggagggtcag
ctggcctatgtggaccagggacaggacctcaccactgtcaacaagcagctgaaaaaacta
cataccatggagagccagatggagacgtggtataaggaggtggggcagctccagatgcag
gtggcctccatcccgcagcagactcagatcaaggagactgttgcaggccgccaagccgtt
gtggaggccaggatggttcgtctgatcgagccgctgaaggagaggcggcgcatcctgctg
gcgtcaaaggaagttcaccaagttgggcgagacctggaggatgagattttgtggatccag
gagcgcctcccaatggccatgtctcatgagcatggctcctctctgcaggcagtacagcag
ctcatgaagaaaaaccagacccttcagagggagctgcagggccacaggagcaggatggat
gacgtcctggagagggcagggatcatcgcctccatacgcagcccggaggctgactgcgtc
cgggcgggccacgaccagctcgcccagctgtgggctctgctctgggccgagaccgagagg
aggcagctgatcctagacgccatgtaccaggcccagcaatactactttgacacggccgag
gtggaggcctggctgagtgagcaggagctgcacatgatgaacgaggagaaggggaaggac
gaaccgagcacactgcagctgctgaagaaacacttggttctggaacagaccatcgaggac
tacgccgagaccgtcggcctgctctcacagcaatgtcgacagctgctggagatgggccat
ccagactgcgagcagatcagcaagcgtcagtgtcagatcgaccgtctgtacgtgtctctg
aaggacctggtggaggagaggaagagtcgcctggagcagcagtactggctctaccagctc
aacagggaggtggacgagctggagcagtggatcgctcagagggaggtggtcgccagctcg
ccggaactgggccaggactacgagcatgtcaccgtcctccaggagaagttcacagagttt
gcatcagagacaggcagcgtggggcaggagcgagtgacggccgtcaaccagatggtggac
gagctcattgactacggccactcagacgccgccaccatagccgagtggaaggacggggtg
aacgaggcctgggccgacctgctggagctcatggagacgcgggcgcagatgctcgccgcc
tcacaccagctgcacaagttcttctccaactgcagagaggtgctggcccagattgaggac
aagcaccgccggctgcctgaagtgcgggctcggcagggcagcaccgccaacaccagcacc
ctacagagactcctgcacagcttcgagcaggacattcagctgctggtcacgcaggtgcgt
cagctgcaggagagcgcagcccagctgaggacggtgtacgccggcgagaaggccgaggcc
atcgcgtgccgcgagcatgaagtgatgcagctgtggaaagagctgctgacgtcctgcgag
gagtgccgggtgcagatcaccaccgagacggacaagctaaggttcttcggcatggtccga
gatcagatgatgtggatggaatcgatcatctgtcagattgggacaggagagaagcccagg
gacgtgtcctcggtggaggtgctgatgaattaccaccagagtttgcagagcgaggtggag
gctcgcagccgcagcaccctggagtgtatcgagatgggcaaaactctgctggctgctcga
aacccagcagccgaagagatcaaggagaagctggacaaggtagttgctaagcaatatgag
ctgtctgagaagtgggacaaacactgggacgttctacagcaattgttggaggtccaccag
tttgcccaggaggcggtggtggcggaggcgtggctgacggctcaggagccgctcatcagc
agcaacgagctgggcgccagtgtagacgaggtggagcagctgattcgtcgacacgaagcc
ttccgcaaagccgccgccacctgggaggagcggttcagctcactgcggcgactcaccacg
gtagaaaagctgaaagccgagcaaagcaaactaccgccgaccccgctgctgggtcgcaaa
gtctttctggaccctcaagatgcctcacccggtgtgtccaccctcccccgcctccccctt
tcccctgtcatgagacagactatttatgagcagaatgaagccaattctcctcgctcgcct
tcgcctgccacgcccacaccctctccctcgtccgtggcccgtcgccttgggtcgacggtc
gccaactacacccccgtgatgaacgcctcgagctaccgccacgcgctggaggcgcggcac
ggcagcgttgtgggcgtggctgcggggctgggccagcccgcaccctcctcgatcgcctcg
gtcgccacggcggccatgctggtttcggccaaccaggcgcgagagcacgacggcgcggcg
agggaccaagtgaccaaggcgatgacttacctccacccagcacatgcggcgaggacgctg
gaggcaaaatcgtccccgtatctgcggcaagccaaaatcaaacacttggacgatgcagtg
acgccgctgatcgtggccagccgactggagaaggcgagggagaaggagagggcgagagag
agggacatcataatgggggagatagggacagagaaggcggaggtggccgtgatggccgag
gtggtgctccaggagccgtgcagggagcgcctgcacagcgagcccaccagagggccgcgg
aggtccaggaccgacccgctgggccaggccgagccccaggtccagacccacagggaccac
aggatagagcggcagctgtccagtgagcagctgatccaggctcgcagggacgagctgcct
caagagctgtggagggaacaggccgagaggcgggagaaacgggggctggagaggcagaca
tccagtgagcacgagggccacgggggccacgagggccggcggagagagagggaccgacac
cggctggagagacaggaatccagtgagcatgacaccgggaaagagcactcagacagacgc
tcaggcggaggagagaagagatccaccatggcagaaatcgtagagcagctgcaagaaaga
gaagcagcacaggcccgtggcgaggtgccccgcctccccaacggggtgccggagaagccc
gcccgtctggaccgaccccgagcccgggacaggcccaagccgcggcgtcgaccgcggccc
aaagaggcgggagagaccacgcggcggtccaggtcggctccggcacagagcagcccggcg
gtcccccagccgccagcacacaccgcacaccacgagggcttcctgttccgcaagctggac
atcgagagtctgaagaagagcaccaacagcaggtcatgggtcaacctgtactgcgtgctc
aacaaaggggagatgggcttctacaaggatgccaagaacaccgccacgccctacaacaac
gaggcgctgctcaacctctcccactgccactgcgacgtcaccaacggctacaagaagaag
aagaacgtgttcacgctcaaaacgaaggacggcagtgagtttttgttccacgcaaaagac
gaggaggacttgaaggtttgggtgggcaacatcactggcagcatcacggagcacgaggac
atcgccaaatgggggcagccccaaccaactacctcatccaccgacgagggcacgcggcga
gacggcagcaaggcggaaaaccggtcggagcgaggcggtgagcgctcggaccgcgccgac
cggatcgagccggcggagaaggagacggagaaggagacggagaaggagaaggagaaggaa
aggggtgagcgctcggagcggggagggaagtctgactctaagcgctcggagaagtccggt
aagaaaaagtga
DBGET
integrated database retrieval system
