Pungitius pungitius (ninespine stickleback): 119215200
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Entry
119215200 CDS
T07626
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03030
DNA replication
ppug03410
Base excision repair
ppug03420
Nucleotide excision repair
ppug03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119215200 (rfc3)
03410 Base excision repair
119215200 (rfc3)
03420 Nucleotide excision repair
119215200 (rfc3)
03430 Mismatch repair
119215200 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppug03032
]
119215200 (rfc3)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119215200 (rfc3)
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119215200 (rfc3)
DNA replication proteins [BR:
ppug03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119215200 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
119215200 (rfc3)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119215200 (rfc3)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119215200 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
119215200 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
DUF2247
AAA_5
ABC_tran
Motif
Other DBs
NCBI-GeneID:
119215200
NCBI-ProteinID:
XP_037323051
LinkDB
All DBs
Position
16:complement(11000021..11002804)
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLGKLDYHKEQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTVVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCSTSTSKVIGPIRSRCL
AIRVPLPSTEEVCSVLTSICKKEGLLLPPELAKQITEKSGRNLRKALLMCEACRVQQYPF
SADQDVPQTDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDIIMKGLVTELL
SNCDGQLKTEVAHMAAYYEHRMQLGSKAIYHLEAFTAKFMAVYKKFMEDGLDGMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggtggacaaatatcgaccgacttcgctcgggaaactcgactatcataaa
gagcaagcgactcagctgaagaatctggttcaatgtggcgacttcccccacctgttggtg
tacgggccgtccggcgccgggaagaagacccgcatcatgtgtctgctgagggagctgtac
ggagccggggtggagaagctgcgcatcgagcaccagaccgtcgtggccccctcgaagaag
aaaatcgagatcaacacgatagccagcaactatcacttggaagtcaacccgagtgatgct
gggaaccaggaccgtgtggtgatccaggagctgatcaagaccgtggctcagtcgcagcag
atccagtcaagcacccagagggagtttaaagtggtcttgcttacggaggtggaccgactc
accaaggatgcccagcatgctctgcggcggacaatggaaaagtacatgtccacctgccgt
ctcatcctctgctctacctccacctctaaagtcattgggcccattcggagccgttgtctg
gctatcagggttcctctgcccagcacggaagaagtctgcagtgttttgacatccatctgt
aaaaaggagggtctgctcctcccacctgaactggccaaacaaatcaccgagaagtctggt
cgcaacctccgcaaagcccttttgatgtgcgaggcgtgcagagtgcaacagtatccgttc
tcggcggaccaagacgttccgcagacggactgggaggtctacctcagggaaacggccaac
gccatcgtcagccagcagagccctcagaggttgttggaggttcgcgccaggctgtacgag
ctgctcacgcactgcatccctcccgatatcattatgaagggtctggtgacagagttgctg
agtaactgcgacggtcagctgaagacggaggtggcccacatggcagcctactacgaacac
cgcatgcagctgggcagcaaagccatctaccacctcgaggccttcaccgccaagttcatg
gccgtctacaagaagttcatggaggacggcctggatgggatgatgttttga
DBGET
integrated database retrieval system
