Pungitius pungitius (ninespine stickleback): 119215205
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Entry
119215205 CDS
T07626
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119215205 (supt6h)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119215205 (supt6h)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
119215205 (supt6h)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
119215205 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
S1_RRP5
HHH_3
HHH_9
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
119215205
NCBI-ProteinID:
XP_037323059
LinkDB
All DBs
Position
16:10375266..10390001
Genome browser
AA seq
1765 aa
AA seq
DB search
MSDFIESEAEESEEEFDEKDLKPKKTQRFLEEDDEEEEENTEDQDERGNLRGLIDDGEEE
EEEEAEGGGDRPRSASAAGSDSEEEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKK
KYDRVKTLDDDDEEDDDQKDMIADEIFHGDAEGELEEGEAVDEPLHHADDDEEGEDEESD
IDDFIVDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADAYDQGEEEEEDQ
DEEGWDRPKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKP
AEDDELEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRN
QQFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFRKMQSYQYEQI
SADPDKPLADGIRPLDTADMERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNTAKSSKKR
LKKIKEVTEDGEEEELEIEEEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQ
FGENLRDSYQRHETEQFPAEPVELAKDYVCSQFSTPEAVLEGTRYMVAMQIAREPLVRHV
LRQTFQERAKINIKPTKKGKKEVDEAHFAYSFKYLKNKAVKELNGDQFLKMCLAEDEGLL
SIDICIDLVGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALTQFLYPQM
AKELKSKLITEAKESIVRSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVA
YAPSRDTPVFCALINGEGEVVDFLRLPYFMKRRNAFKEDEREKKAHDIETLKKFLSGKKP
HVVAVAGESRDAQMIMEDIKRAVSELEQESSLPAVGVELVDNELATLYMNSKRSEVDFRD
YPPLLRQAVSIARKIQDPLMEYAQVCSTDDDILCLKLHPLQEQVVKEDLLCALHCEFINR
VNEVGVDVNKAIAHPHTQSLVQFVCGLGPRKGSQLLKILKQNNTRLENRTQLVTMCHMGP
KVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANP
AGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVVYRVPN
TEEVFNLLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQDN
FPELSEVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKTVKHPEERVKVGMTVHC
RIMKIDIEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTETEDQKHEEELKKKQQRTPY
IKRVIAHPNFHNISFNQAEKMMESLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVRE
EGKENAFSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLGHKYFQDGLWGIKEKMEE
LLVKTKREKPTFIPYFLSACKEMPGKFILGYQPRGKPRVEYVTITPDGFRYRSQIFPTVN
GLFRWFKDHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFS
AIAAVTGQGQNPNTTPAQWGSSQYGYSGSTGGGGGGGGGGGSSSAYHVFATPQQPMATPM
MTPSYSYTTPSQQALGTPQYASSTPQTSHAHGHPHVSHQSLHGHSSHHSHSSGTPSSSTS
SRGRTPQQQQPQPSPQTPQPPKAGGSSASAVDWGKMAEQWLKEKEAEGRKKTPRMTPRPS
PSPMIESTPMSIAGDATPLLDEMDR
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttattgagagcgaggcagaagagtcagaggaggagtttgatgagaaagac
ctcaagccgaaaaagacccagaggtttttggaggaagatgatgaagaggaagaagagaac
acagaggaccaggatgagcgaggaaatttacgcggactcattgatgatggagaggaggag
gaggaagaggaggcggagggtgggggagaccggccaagaagtgcaagtgcagcggggagt
gactcagaagaggaagtcaggcatcgccgtaaaaagcgcaattatgatgactacctcgat
gatgatgatctggacctaattgaggaaaacttgggtgtaaaagtcaaaaggaggaaaaag
aagtatgaccgtgtgaaaacacttgatgatgatgatgaagaggatgatgatcagaaggac
atgatcgcagatgagatatttcatggtgatgccgagggagagctagaggaaggcgaggcg
gtcgatgagcctctccaccacgcagatgacgacgaagaaggagaggacgaggagtcagat
atagacgattttattgttgatgatgatggccaacccatcaccaaaaagaggggcaagaaa
ttctcaggatacacagacgcagctctccaggaggcccaggagatttttggtggggacttt
gactttgccgactttgacgcagacgcatatgaccagggggaggaggaggaggaggaccag
gatgaagagggttgggaccgacccaagaagcagacgaagaggaggcaggggaggaaaagc
atctttgagatatacgagcccagcgagttggaaagtagtcacatgactgaccaagacaac
gagatccgctctacagatatgcccgaaaggttccagttaaggtccatccctgttaaacct
gctgaggatgatgagctggaagaagaagcagagtggatcttcagacatggcttctccact
cttaccatctccatgcaggagagcacagattatttagaccgggggacaaccacaaacttc
agcaggaaaggtcccagcacaattgccaagatcaaagaagccctcaacttcatgaggaat
caacaatttgaggtcccattcattgctttctacaggaaagaatatgtggagcctgaacta
aacatcaatgacttgtggaaggtgtggcagtgggatgaaaagtggactcaactgaagaca
cgaaagcagaacctgacccgtctgtttcggaagatgcagtcctaccagtatgagcagatc
tctgccgaccccgacaaacctttggctgacggtatccgtcctctggacaccgctgacatg
gagaggctaaaagatgtgcagactcttgaagagcttggtgatgtgtacaaccactttctg
ctgtactacggccgagacattcccaagatgcagaatactgccaaatccagtaagaagagg
ctcaagaagatcaaagaagtgacagaggatggtgaagaggaggaattggagatcgaagaa
gaagaagaagaacagaaaggacccgacctcaagctggcgtctcgtagagatatgtacagc
atctgccagagtgtggggctggatggcttggctaaaaagtttgggttaactccagagcag
tttggagaaaatttgagagacagttaccagcgtcatgagaccgagcagttcccagctgag
cctgtggagctggccaaagattatgtttgcagtcagttcagcactcctgaggcagtgctg
gaaggaaccaggtacatggtggccatgcagattgctcgcgagccgctggtcagacatgtt
ctccgacagacctttcaggagagggccaagatcaacatcaagcctaccaagaagggcaaa
aaggaggtagacgaggctcattttgcctactccttcaagtaccttaagaacaaggctgta
aaggagctgaatggggatcagtttttgaagatgtgcctggcagaggacgaggggctactt
tccattgacatctgtatcgaccttgtaggggtcaaagggtatgctggggaccagacgtac
tttgatgagatcaaacagttctactacagggatgagttcagtcaccaggtgcaggagtgg
aacaggcagcgtactttagccatagagagagccctcactcagttcctctaccctcagatg
gctaaggagcttaagagcaaactgatcactgaggccaaagagagcatcgtcaggtcctgc
tgtcgtcggttgtataactggctcaaagtggctccttaccgaccagatcagcaggtggag
gaagacgatgatctgatggatgagagtcagggcaaaggcattcgggtgctgggtgttgcc
tatgctcccagcagagacacgccagttttctgtgctctgatcaatggggaaggcgaggtg
gttgacttcttgcggctgccctacttcatgaagaggagaaatgcctttaaggaggatgag
agggagaagaaggcccacgacatcgaaactctcaagaagtttctgtccggcaagaaacca
cacgttgttgctgtcgctggggaaagccgagatgctcaaatgatcatggaggacatcaag
agggctgtcagcgagctggagcaggagtcctctctacctgctgtgggcgtggaactcgtt
gacaatgagttggccacactgtacatgaacagcaagagatctgaggttgattttagggat
taccctcccttactgcgacaggctgtgtcaatagccagaaagatccaggatcccctgatg
gagtatgctcaggtttgcagcaccgatgatgacattctctgcctcaaactacacccgctg
caggaacaagtggtgaaggaggatttgctctgtgctcttcactgtgaattcatcaaccgc
gttaatgaggttggggtggatgtgaacaaggccattgcccatcctcacactcagagcctc
gtccagttcgtctgtggtctgggaccaagaaagggctcccagctactcaagattctgaag
caaaataatactcgactggaaaacagaactcagctggtcacaatgtgtcacatgggacct
aaagtttttatcaactgtgccggtttcatcaagatcgacacagcatcgcttggggacagc
actgactcctacattgaggttctggatggatctcgtgtgcaccctgagacgtatgagtgg
gctcgcaaaatggccgtggacgcccttgagtatgatgagtcggcagaagatgccaacccc
gctggcgctctggaggagatcttggaaaacccggaacgtcttaaagatttggacctggat
gcctttgccgaagagcttgaaagacagggctacggaaacaaggggattactctgtatgac
atccgtgcagagctgagctgcagatacaaagacctgagagttgtatacagagtccccaat
actgaggaggtcttcaacctgctcaccaaggagactccggagaccttttatattggtaag
ctgatcaccagtatagtcactggtattgctcaccgacggcctcagggagagagctacgac
caggccatccgtaacgattcaacagggctgtggcagtgtcccttctgtcagcaggacaac
ttccctgaactcagcgaggtgtggaatcactttgacagcggttcatgtccgggtcaggcc
attggggtgcggtccagattagataacggcgtccagggattcattcctaccaagttcctt
agtgacaaaactgtcaagcaccctgaggagagggtcaaggtgggcatgacggttcactgc
cgcataatgaaaatcgacattgaaaaattcagcgtcgacctcacgtgtcgaacctcagat
ttgatggacaaggccaatgagtggaagctccccaaagacagctactatgacttcgacaca
gagaccgaagaccaaaaacacgaggaggagctcaaaaagaaacaacagcgaacaccatac
attaagcgtgtgattgcccacccaaacttccacaacattagtttcaaccaagcagagaag
atgatggagagtctggaccagggagacttgatcatccgacccagcagcaagggcgagaac
cacctcacagtcacctggaaagtggctgatggcatctaccagcatgtggatgtaagagaa
gaaggcaaagagaatgcattcagcttagggcatactctctggatcaataatgaagagttt
gaagatctggatgaaatcactgctcggtatattcagccaatggcatcgttcgccagggat
ctactggggcataagtacttccaggacggcctctgggggatcaaagagaaaatggaggag
ttattggtcaagacaaagagggagaagcctactttcatcccgtacttcctttcggcatgt
aaagaaatgccaggaaaattcatactgggctaccaacctcgaggaaaaccacgggttgag
tatgtgaccatcaccccggatggcttccgctatcgttctcagatatttcccacagtaaat
ggactatttcgttggtttaaggaccattaccaagagcccgtgcccggcatcactcccagc
aacagtagccgaacaaggacccctgcatccctgaacgccaccccagccaatatcaacatc
gcagacttgacgcgagctgtcaacgccctcccacgcaacatgacctctcagatgttcagt
gccatcgccgcagtcacaggccaaggccagaaccccaacaccacacccgcccagtggggc
tccagccagtacggctacagtggcagcacaggaggaggaggaggaggaggagggggagga
gggagctcctctgcttatcatgtatttgccacacctcagcagcccatggcgactcccatg
atgacgcccagctactcttacaccacaccgagccagcaggccctcggcacgccgcagtac
gccagctccactccgcagacctctcacgcacatggccatccccacgtgtcccaccagagc
cttcacggccacagcagtcaccacagccactcatccggcacgccgtcctcctctacctcg
tccagaggaaggacacctcagcagcagcagccgcagccgtcgccgcagacgccgcaaccg
ccaaaagccggcggcagcagcgcctctgccgtggactggggcaagatggcggagcagtgg
ctgaaggaaaaagaagcggaggggcggaagaaaaccccgaggatgacgccccggccgtca
cccagcccgatgatagagagcacgcccatgtccatcgccggagacgccacacccctactg
gacgagatggaccgatag
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