Pungitius pungitius (ninespine stickleback): 119215217
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Entry
119215217 CDS
T07626
Symbol
gabra3
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04080
Neuroactive ligand-receptor interaction
ppug04082
Neuroactive ligand signaling
ppug04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119215217 (gabra3)
04082 Neuroactive ligand signaling
119215217 (gabra3)
04519 Cadherin signaling
119215217 (gabra3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119215217 (gabra3)
Ion channels [BR:
ppug04040
]
Ligand-gated channels
GABA-A
119215217 (gabra3)
SSDB
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Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
119215217
NCBI-ProteinID:
XP_037323076
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Position
16:complement(6485147..6549642)
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AA seq
480 aa
AA seq
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MAAALWKPKPLDLGLWIFLLLLNFLAEARAVIGHREPLPDDSKDNITIFTRILDRLLDGY
DNRLRPGLGESVTEVGTNIFVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLPL
NNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDF
PMDAHACPLKFGSYAYTNNEVIYLWTKGDENSVSVAEGGSRLNQYDLLGHVIGKETISSS
TGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAWDGKKEGMEI
REPFQANMARINDMRRESSTLSKKSNNTFNIVGTTYAINEAKDQGLTTIAKSAAAAAAKH
QYLHKMEDPYTEAKKSYNRVSKVDKISRIIFPVLFFIFNLGYWATYVNRKPAIMKANNSN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcactttggaagcctaaaccactggatttgggcttgtggatcttcctcctg
ctcctcaacttccttgctgaagccagggcagtcattggacacagggagccgttgcctgat
gacagtaaagacaatatcaccattttcacccgaattcttgacaggctgttggatggatat
gacaacagactacgtcctggactgggagagagtgtgacagaagtggggacaaacatcttt
gttacaagttttgggccggtgtcggatacagacatggagtacaccatcgatgtcttcttc
cgtcagagttggagggacgagaggcttaagtttgacgggcccatgcaggttttacccctc
aacaacctcttggctagtaagatctggactcctgatacattcttccataacggaaagaaa
tcggtggcccataacatgacgactcccaacaaactgctgcggctagtcgacaacggaaca
cttctatacacaatgaggttgaccattcatgccgagtgccccatgcacctggaggacttc
ccgatggatgcacacgcctgtcctttgaaattcggaagttatgcctacaccaataacgag
gtgatctacctgtggaccaagggagacgaaaactctgtttctgttgcggaaggtggctcc
aggctgaaccagtatgacttactgggacatgttattggcaaagaaaccatcagttccagc
acaggcgaatatgtagtgatgacaacatatttccatttgaaaaggaaaattggctatttt
gtgattcaaacctacctcccgtgcatcatgactgtcatactgtctcaggtctccttctgg
ctaaacagagaatctgttcctgctcgcactgtatttggggtcaccactgtcctgaccatg
accaccctgagcatcagtgctagaaactccctccctaaggtggcctatgccactgccatg
gactggttcatggcagtgtgctatgcctttgtcttctctgccttgattgagtttgccaca
gtcaactacttcaccaaacgcagctgggcatgggatgggaaaaaggagggcatggagata
agggaaccgtttcaggctaacatggccaggattaacgatatgagaagagagtcgtcgacg
ttgtccaaaaagtcaaacaacaccttcaacattgttggaaccacctacgccatcaacgag
gctaaagaccaaggtttaacgaccattgccaagagtgccgctgcggcggcggccaaacac
cagtacctccataaaatggaagacccctacacggaggccaagaagtcttacaaccgtgtc
agcaaagtggacaagatctcacgcatcattttcccagttttgttcttcatcttcaactta
ggctactgggccacgtacgtcaacaggaagcccgccatcatgaaggcaaacaactcaaac
tga
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