Pungitius pungitius (ninespine stickleback): 119215222
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Entry
119215222 CDS
T07626
Symbol
cchcr1
Name
(RefSeq) coiled-coil alpha-helical rod protein 1 isoform X1
KO
K16760
coiled-coil alpha-helical rod protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119215222 (cchcr1)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
119215222 (cchcr1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HCR
Filament
ADIP
Apolipoprotein
HIP1_clath_bdg
DUF6317
Motif
Other DBs
NCBI-GeneID:
119215222
NCBI-ProteinID:
XP_037323087
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All DBs
Position
16:complement(8546967..8573037)
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AA seq
859 aa
AA seq
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MERHNFGKERLIVPTDFTSSAVSRNIHDDLVPPSHFTSSLQSAGAHGGVQMAVTPPPNPW
INPGMMPLQSGVPSPNNQWLAITQARQENFDLRRENHRIMMLQGDGVRGRNPVDHQSDLR
PSCAEGGAQRSRWESEWRLEAEKYKAEAERLKGQVEALKETAGRHREEMRDRDSSLNRTS
HELEAIREDLCRAKTEISQIRGELTHSIAQKEEIRSQLARLKKESGEEITELRRDLMSSK
AEAQELSLKGEMGRLQAAADAKQQILTLSGHLEEIQKRHKVELLELNNSHCAELGAARSS
NRELQDRLESMTSEGLQLKSTLMEVSTERDGLKEHLSQMGQAFETQSATLNSLRNYIGQL
APEKGEKEQLNEAVKKLRKEKAALQMTTELLTVRFNSVSEILTLQEEKIVKKTSTDSLVK
NESEGLQVLRLWRDKVFKLCVQLRSKDIELRGEKDEVLSKVKLLEQELQQEQHRANVLQH
SLDDRIAELDLERLEKETLKRDLVLEQQDNLQLKSQREREEAELKSLTEAVRRFGLAFEG
KVAEMDTAQARLNTLTQRLTFAKRRVETIQGLTMRRVALQKAKQATGPGTEQTDDSITDL
QAELSGVCEERDKLTQELKRTPELIEKALADLKEQYESKLRRQQQQLEQSWAEVRQALAG
GAEAERSLQQIQAQLEESKVNLEELRCELLSQQEHSERALREKVSELEDCCAEKLREMEV
QVNTAKREHTKAVMTLRQFERDAARKEDRMRETQTQKKRDIPIKQPLLFQATVAAERRLT
SECARAQTAARQNSSTAREHRKPPSERSHCVLPADGRLLSVLEELHSLSAAVVNSSEDSA
EEEGQNDNVGPSTGRTADT
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggagagacataactttgggaaagagaggctaatagttcccactgattttacctcatct
gctgtttcaaggaatatccatgatgacctggtacccccatcgcatttcacatcaagtctg
cagtctgctggagcacacggaggcgttcaaatggcagtgacaccgcctcctaacccttgg
attaacccaggtatgatgccactacaatcaggggttcccagtcccaacaatcaatggctc
gccatcacacaggcccgacaggaaaactttgatcttagaagggaaaatcacaggatcatg
atgttacaaggagacggcgtaagaggaaggaaccctgttgatcaccagtcggaccttagg
ccaagttgtgcagaaggaggagcgcagcggtccagatgggagtctgagtggcgtttggag
gcagagaagtacaaggccgaagctgagaggttaaaggggcaggtggaagccctgaaggag
acagcagggagacaccgggaagagatgagagacagagacagctccttgaacagaaccagc
catgaattggaagcaatccgtgaagatctatgtagggctaagactgaaatcagccaaatc
cgaggggagctcactcacagcattgcacagaaggaagaaatacgctcacagctcgcaaga
ctaaagaaagaatctggtgaagaaattacagagctgagaagagacttgatgagcagcaaa
gcagaagcccaggagctcagtctaaagggtgaaatggggaggttacaggctgcagcggat
gccaaacagcagattcttacactgtctggacacttggaggaaatacagaagaggcataaa
gtggagctgctagagttgaacaattcccattgtgcagagttgggtgcagcaagaagttca
aaccgtgaactacaggacagactagaatcgatgacctctgaagggttacagctaaaaagc
actctgatggaggtatctactgagagagatggactgaaagaacatttaagccaaatggga
caagcgtttgagacacaatcggcaacgctgaacagcctcagaaattacatcggccagctc
gccccggagaaaggagagaaggaacaattaaacgaagctgttaagaagctgagaaaagag
aaagcggctcttcagatgaccacagagcttttgacagtccggtttaattctgtgagtgag
atactcacccttcaagaagagaaaatagtgaaaaagacgtccacagattcgcttgtgaag
aatgaatcagaaggccttcaagtgctccggctctggagggacaaagtgtttaaattatgc
gtccaacttcgctcaaaggacattgaactaagaggggaaaaggatgaagttctttcaaaa
gtaaagctcctcgagcaggagctccagcaggagcagcaccgagctaatgtgctccaacac
agtctagatgacaggatagctgagctggacctggagagactggaaaaggagacattgaaa
cgggacttggtgctggagcaacaagacaacttacagcttaagtcacagagggagagagaa
gaggctgaactgaaatccctcacagaggcagttcgtaggtttggtttggcatttgaaggc
aaagtggcagaaatggacaccgctcaagcaaggctcaacactctcacccagaggctaact
ttcgctaaaagacgagtggagacgatacaaggtttgaccatgaggagggtggctctgcag
aaagctaagcaggccactgggcctgggacagagcaaactgatgacagcatcacagacctt
caggcggagcttagtggggtgtgtgaagagcgagacaagctcacacaggagctcaaaaga
acccctgagctcattgagaaagctctggctgacctgaaagaacagtatgaaagcaaactg
cggcggcagcagcagcagctggagcagagctgggcggaggtgcggcaggctttggctggc
ggagcggaggcagagcgcagcctgcagcagatccaggcccagctggaggaaagcaaggtc
aacctggaggaactccgctgcgagctgctcagccagcaggagcacagcgagcgcgccctc
cgggagaaagtgtctgagctcgaggactgctgtgctgagaagctgagagagatggaggtt
caagtcaatactgcaaagagagagcacaccaaagcagttatgactttgcggcagtttgag
agagacgcagcaaggaaagaggacagaatgagagagacccaaacacagaaaaagagggat
atcccgattaaacaacccctgctgttccaggccaccgtcgctgcagagagacgtttgaca
agtgagtgtgcaagagctcagacagcagctagacaaaactcttccactgccagagaacat
cgaaaacccccctcagagaggagtcattgtgtgttacctgcagacgggagactgctgtct
gttttggaggagctccattctctcagtgcggctgtggtaaacagctctgaggactcggcg
gaggaggagggacagaatgacaacgtgggaccatcaacaggccgcacagctgatacgtga
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