Pungitius pungitius (ninespine stickleback): 119215326
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Entry
119215326 CDS
T07626
Name
(RefSeq) coatomer subunit beta'-like
KO
K17302
coatomer subunit beta'
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119215326
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119215326
Membrane trafficking [BR:
ppug04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
119215326
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
119215326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_IFT122_1st
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_LRRK2
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Clathrin
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
119215326
NCBI-ProteinID:
XP_037323303
LinkDB
All DBs
Position
3:2249207..2255771
Genome browser
AA seq
1004 aa
AA seq
DB search
MPLRLDIKRKLSARSDRVKSADLHPTEPWMVASLYSGTVVVWNHETQMMVKTFELCDLPV
RVARFVARKHWVVAGADDMQIRVFNYNTLERVHMFEAHSDYIRCIVVHPTQPYILTSSDD
MLIKLWDWDRKWTCSQVFEGHTHYVMQVVINPKDNNQFASASLDRTIKVWQLGSRTPNFT
LEGHEKGVNCVDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVTCVCFHPE
LPIILTGSEDGTVRVWHSNTYRLENTLNYGMERVWCISGQPGSNSVALGYDEGSIIIKLG
REEPAMSMDASGKVMWARHSEVQQANLKAMVEAEVRDGERLPLGVKDMGSCEIFPQTIQH
SPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSQYAIREGSSMIKVFKNFKE
KKAFKPDFGAEGIFGGFLLGVRSNSGLAFYDWESCDLIRRIEIQPKHIFWSDSGELVCIG
TDESFFVLRYLADRVAAAQESKEETTEDGIEGAFEVLGEVSEVVKTGAWVGDCFIYTSSL
NRLNYYVGGEIITVAHLDRTMYLLGYIPKDDRLYLGDKELNVVSYALLLSVLEYQTAVMR
RDFGTADKVLPTIPKEQRTRVANFLEKQGFRQQALAVSTDPEHQFELALHLGELEVAQQL
ASEAQSEHKWKQLAELATAKCQFGLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKTNVAFLTYFLQGRLDKCLDLLIETGRLPEAAFLARTYLPSHTSRVVKLWKDSLSKV
NRRAADALADPSQYSNLFPGLQQALQAEGYLKETHVGVRPAAEYPLVVPNEERNVLEESA
GFESKGEMAEPKGTEETTETAPEDGGSDPTAEPERLRSSPVEDAPPSVETAAEETPGETM
ATGNGRTSPAPEPLISFESEDGPPRDEASPEEQTTALPVEPAGALQAEVGSSKEGSLEEE
EEGPEGPAEDLEAEINEEILDLDDFDLEDIDTTDVNLDDDFLSE
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcggctggacatcaagcggaagctgagcgcccgctcggaccgggtgaagagc
gccgacctgcaccccacggagccctggatggtggcgagcctgtacagcggcaccgtggtg
gtctggaaccacgagacgcagatgatggtgaagacctttgagctgtgtgacctgccggtc
cgagtggccaggtttgtggcgcggaaacactgggtcgtcgccggagcggacgacatgcag
atccgcgtgttcaactacaacacgctggagcgggttcacatgttcgaggctcactccgac
tacatccgctgcattgtggtccatcccacgcagccctacatcctcaccagcagcgacgac
atgttgatcaagctgtgggactgggacaggaagtggacgtgcagtcaagtgtttgaggga
cacactcactacgtcatgcaggtggtcatcaaccccaaggacaacaaccagttcgccagc
gcctctctggaccggaccatcaaggtgtggcagctgggctccaggaccccaaacttcacc
ctggagggccacgagaagggggtgaactgcgtggactactacagcgggggggacaagccc
tacctcatatcgggggcagacgaccgcctggtgaagatctgggattatcagaacaaaacg
tgcgttcagaccctggagggtcacgcccagaacgtgacctgcgtctgcttccacccggag
ctgcccatcatcctcacgggctccgaagacggcactgtgcgagtgtggcactccaacacc
taccggctggagaacacgctcaactacggcatggagcgggtgtggtgcataagcggccag
ccgggctccaacagcgtggctttgggctacgacgaaggcagcatcatcatcaagctgggg
cgcgaggagccggccatgtccatggacgccagtgggaaggtcatgtgggctcgccactcc
gaggtgcagcaggccaacctgaaggccatggtggaggccgaggtccgggacggggagagg
ctgccgctgggcgtcaaggacatgggcagctgtgagatcttcccccagaccatccaacac
agccccaacgggagattcgtcgtggtgtgtggagacggagagtacatcatctacaccgcc
atggccctgaggaacaagagcttcggctcggcccaagagttcgtctgggcccatgactcc
tcccagtacgccatacgggagggcagcagcatgatcaaagtcttcaagaacttcaaagag
aagaaggctttcaaaccggacttcggggctgaaggcatcttcggcggcttcctgctgggc
gtgaggtcaaacagcggcctggccttctacgactgggagagctgcgatctgatccgccgc
atcgagatccagcccaaacacatcttctggtcggactccggggagctggtgtgcatcggc
acggacgagtccttcttcgtgctgcgctacctcgcggaccgagtggcagcggcgcaggag
tccaaggaggagacgacggaggacgggatcgagggcgccttcgaggtgctgggggaggtc
tccgaggtggtgaagacgggggcctgggtgggcgactgcttcatctacaccagctccctc
aacagactcaactactacgtgggaggagagatcatcaccgtcgctcacctggacaggacc
atgtatctgctgggctacatccccaaggacgaccgcctctacctgggagacaaggagctg
aacgtggtcagctacgcgctgctgctgtccgtcctcgagtaccagacggccgtcatgagg
cgggacttcggcaccgccgacaaggtcctgcccaccatccccaaggagcagaggaccagg
gtggccaacttcctggagaagcagggcttcaggcagcaggccctggccgtgtccaccgac
ccggagcaccagttcgagctggccctgcatctgggggagctggaggtggcgcagcagctg
gcctcggaggcgcagtcagagcacaaatggaagcagctggccgagctcgccactgcaaag
tgccagttcggcttggcccaggagtgcctgcaccacgctcaggattatgggggattactg
ctgttggcgacggcctcgggcaacgccaccatggtgggaaagttggccgagggggcggag
agggacgggaagaccaacgtggccttcctcacctacttcctgcagggaagactggacaaa
tgtctggaccttctcatcgaaaccggccggttgccagaagctgcattcctggcgaggaca
tacctgcccagccacacgtcgagagtggtgaagctgtggaaggacagtctgtccaaggtc
aaccgcagggcagcagatgctctggccgacccgtcccagtacagcaacctgttcccgggc
ctccagcaggccctgcaggctgaaggttacctgaaggagactcacgtcggggtcaggcct
gctgcagaatacccgctcgtcgtgccaaacgaggagcgtaatgttctggaggaatctgca
ggttttgagtccaaaggagagatggccgagccgaagggcacggaagaaacgacggagacg
gcgcccgaggacggcggttcggatcccaccgcggagccggagcggcttcgatccagtccg
gtggaagacgccccgccgtcggttgagacggcggcagaggaaacgccgggcgaaaccatg
gcaaccgggaacggccggacctccccggcgccggagccgctcatctccttcgaaagcgaa
gacggcccgccgcgggacgaggcgtctccagaggaacaaaccacagcgctcccagtggag
cctgcgggggctctgcaggcggaggttggttccagcaaagaggggtccctggaggaggag
gaggagggtccagagggacctgcagaggacctcgaggctgagatcaatgaagagatcctc
gatctggacgattttgacctggaagatattgacaccacagatgttaacctggatgacgac
ttcttgagtgaatag
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integrated database retrieval system
