Pungitius pungitius (ninespine stickleback): 119215370
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Entry
119215370 CDS
T07626
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04140
Autophagy - animal
ppug04148
Efferocytosis
ppug05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119215370 (vps16)
04148 Efferocytosis
119215370 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119215370 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119215370 (vps16)
Membrane trafficking [BR:
ppug04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119215370 (vps16)
Hops complex
119215370 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
119215370
NCBI-ProteinID:
XP_037323381
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MTFITANWNPLGEAFYRKSELYEMCWNLREGLRDCLVAAAPYGGPIALLREPLRRSPSSR
PQLEIYSASGVSIASFPWKSGPVVHLGWTVSDELLCIQEDGSVLIYDLFGSFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGVAIVTGSSRFILATNIDDLKLRRLPEVPGLQGKPTCWVVL
NQDRQTKVLLSTGSELYILDNTSCTAVSPPGLGPQASSIVHMSVSFSYKYLALLTDSGHL
WTGLSHLQDKMSEVDTEKTTPPKQMVWCRRPKSQQPSVVLMWDRLLMVVGVCQDTIQFPT
EDQCVLVGEMDGVRIISSTNQELLQEVPLVCQEIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQRMLAEAVCQCIEAAGHEYDPNTQKSLMRAASFGKCFLTDFSPDQFVSTCR
ELRVLNAVRESSVGLPLTHTQFKQMTLQVLIDRLVYRQFYPLAIEMCRYLKIPDYQGVSR
VLKHWASCKVQQKDLSDEAIARAMCAKVGDSPGVSYSDIAAKAYECGRTELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQETLKDLYNQDDDHKELANYYVTASYREKRLESRLSLLQSAVDEYNKAKNE
FSAKATEEEMRLLRFQRKLDDEKGAGLLELSLQATMEALLALGLYKQAEQLYRDFRVPDK
RYWWLKLKSLAEKEEWDELEKFSKSKKSPIGYLAFVEVCMKSNNKYEAKKYVSKVTPEQR
VKAHLAISDLDGAADAAIERKNDSEIAAVLSRCSAADRLLIDKLNRARASTVKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcatcacagccaactggaacccgctgggggaagctttctatcgaaagagtgag
ctgtatgagatgtgctggaacctaagagaaggactccgagactgtctggtggctgcagct
ccatatggaggtccaatagctctcctcagagaacctctcagacggtctcctagttctcgt
cctcagcttgagatttattctgcatctggagtctccattgccagcttcccgtggaagagt
ggtccagtggtccacttgggttggacggtcagtgatgagctgttgtgtattcaggaggat
ggatcggttctgatctacgatctgtttggatctttcaagagacacttcagtatgggacag
gaagtggtccagagtcaggttttggaagccaaagtgttccactctccgtatggaacaggg
gttgccatagtaactggctcctcgcgcttcatcttggcaaccaacattgatgacctgaag
ctcagaaggttacctgaagtccctggtctgcaagggaaacccacctgctgggtcgtcctc
aaccaggacagacagactaaagtcctcctgtccaccggatcagaattgtacatcctggac
aacacgtcctgtactgcggtgagtcctccaggtcttggtcctcaggccagcagtattgtc
cacatgtctgtgtctttcagctataaatacctggctctcttaactgactctggtcacctg
tggacaggcctctcccatcttcaggacaaaatgagtgaagttgacactgaaaagacgacc
cctcccaaacagatggtctggtgtcgcagaccaaagagtcagcagccgtctgtagtgttg
atgtgggacagactgctcatggttgtcggagtctgtcaggacaccatccaattcccaaca
gaggaccagtgtgttttggtcggagaaatggacggagttcgcattatcagctcaaccaat
caggagctgcttcaggaggttcctctggtgtgtcaggaaatcttcaaaatcgcttccatg
gctcccggtgctcttctgctggaggcccacagggagtacgagaagtcgagtcagaaggct
gatgagtacctgagagagatcaaagagcaacgaatgcttgcagaagcagtttgccaatgc
atcgaggcagcaggacacgaatacgacccaaatacgcagaaatccttgatgagggccgca
tccttcggcaagtgtttcctgacggacttcagtccggatcagtttgtgtcgacctgcaga
gaactccgagtgctgaatgccgtgagagagagcagtgtggggctgcccctcactcacacg
caattcaaacagatgactctccaggtgctgattgataggttggtttatcgacagttttat
ccattggcgatagaaatgtgtcgttacctgaagattccagattatcaaggagtcagcaga
gtccttaaacactgggcttcatgcaaggtgcagcagaaggacctatcagacgaggccatc
gcccgggcgatgtgcgctaaggtgggagactcacctggggtttcttattcagacatcgca
gccaaagcgtacgaatgtggacgcactgaactcgccatcaagttgttggactttgaagct
aggtctggagagcaggtccctctgctgttaaagatgaagaggagtcagttggctctaagt
aaagccgtggagagcggagacacagatctagtttacacagtggtgacgtacctgaagaac
gagatgaacagaggagacttcttcatgacacttaggaaccaaccggtcgctttgagcctc
tacagacagttctgtaaactgcaggaacaagaaactctgaaggacctttataaccaggac
gatgaccacaaggaactagccaactactacgttactgccagttacagagaaaagaggtta
gagagccgtctgtctctactgcagagcgctgtggatgaatacaacaaagccaagaatgag
ttctctgcaaaggccacagaggaagaaatgcgtctcttacgtttccaacgtaaactcgat
gatgagaaaggggcggggctactggaactgtctctacaggctaccatggaggctctgttg
gctttaggactctacaaacaagcagagcaactgtacagggacttcagagtacctgacaaa
aggtattggtggttaaaactcaagtccctggcagagaaggaggagtgggacgagttggag
aagttctcaaagagcaagaagtcccctattggctacctggcgtttgttgaagtttgcatg
aagagtaacaacaagtacgaagccaagaagtatgtttccaaggtcacacctgagcagagg
gtcaaagctcacctggccattagtgatctcgacggtgcagcagacgccgccatcgagagg
aagaatgactctgagattgcggcggtcctctcaagatgttccgccgccgaccgcctgttg
attgacaagttgaaccgagcccgagcgtccactgtcaaaaagtga
DBGET
integrated database retrieval system
