Pungitius pungitius (ninespine stickleback): 119215464
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Entry
119215464 CDS
T07626
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
KO
K14316
nuclear pore complex protein Nup121
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119215464 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119215464 (pom121)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119215464 (pom121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
119215464
NCBI-ProteinID:
XP_037323557
LinkDB
All DBs
Position
16:complement(15188179..15196937)
Genome browser
AA seq
1304 aa
AA seq
DB search
MRVLRRRAAAMSPREKRLTLAIILALGAVSLALCFIPTFLFVCFLLALCCIVCCYLSGQL
LPARLGLDPRAGVNLPSGLRRWMWGWWGTGVSVASRGRTKSGRNKTELRDAEGNFRERLV
ETGIYRRESLASDSFLFSPRDFLMGSYIGKPEGPPADSVRPRAGRNPREQLREKLSRPNH
AVYTPNRRLSFAGEPLGTPGRFTITPQRHYPLQQPGVSSVGVLPPVKWDGFRKKNILSPR
NSPAALSPVTVKIARPDHHSSPSLNHLSCAGLPRAPVDPCSRESVLKVLKESRKREVEDE
DKSFTTEQKSKRRRNDSGGSTHSAFETLLPNGAPSQLVPKPGNLKRGVPSLAEDSIMKRS
RTSSISSGSGVHAPRGTPGTRRNPIQSSYSSSLGLSQRKKRSAPSSPLSSPGSSRPQTPE
GVSKRPREDSGPSPGAASSVRSDQTASNKAPVTSKLTPVPKVPFTTSADSTGSGGKRKRK
IQLVSSNRDDHISLPPPPELGYTITVKDLDEEKKAALSKIQKVLETPASEPEKSASPPAA
TLTSQLGTSYNTTTTTLSSLLAAPLPTASSSAIPVINLDPSPISSASTTTAASNPLLEAL
KMKISIPSSSTSAANTATVSATTTPVLSGGLTLKVSTPSATPQRPAASQSSSAFALVLGQ
VSKASGGALPVTGSNLFGLASPISTPAGSSPSYPPSAAVAAPAGSLASVSSANPLLASGF
KPIFSVTAANATTTSAATSATESKPPAGNFTPIFGAATAGAGFGQPPPYSTTNPASTVSL
SSVSSMFGSTSSTVVTSSGFPGMTSLPTSAATTGSITATQPTAQPAVKSLFGNWSAPSTT
STSSASAQSSNTGSPFQFGAATTTAAAAPAAAATTTSSNSGFSFGAAQQDPQAANQKVFP
FAHSAPGQNTTTASFGGFAMASAASTTTAAASQSNFTFGKPSLQAPQATPASFGSSAAPA
TQATFGSSAAPATQATFGSSAAPATQATFGSSAAPATQATFGSSAAPATQATFGSSAAPA
TQVTFGSSAAPATQATFGSSAAPATQVTFGSSAAPATQATFGSSAAPATQVTFGSTAPAT
QVTFGSTAPSTFGSVTAAPKQFSFGGSGPASSTPAPNTAPPPFPFGSAAVPTTKPAFGAS
SAGFAFGVTTAPSAAASAPPSFGATSQTQSAPSATFAFGRAAPQQAPAGAAQPAPGGFNF
GAAMPCPQFGTPVSNNPAPQMGSFNFGAAATDKPAFGTSTPSFGQSAVSAAGPIPFGSPA
TPVQNFNAGPFGSPAAPSFSIGAGSKPSGARQRLQARRQHNRKK
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcctccggcggcgcgctgccgccatgtcacctagagagaaacgtttaacgtta
gcgattatcctagctctaggcgcggttagtctcgcgctttgttttattcctacatttctt
tttgtgtgttttcttcttgcattgtgttgcattgtgtgttgctatctcagcggacaacta
cttcccgccaggctaggcctcgatccccgagctggggttaacctaccatccgggctccgg
cggtggatgtggggttggtgggggaccggcgtgtcggtcgcctcgcgggggagaaccaag
agcggcagaaacaaaaccgagctccgggacgcggagggaaactttagagaacggctcgtt
gaaactgggatttatcggagggaatccttggcaagtgactcttttcttttcagccctcgg
gatttcctcatggggagttacatcggaaaacccgaaggtccacccgccgactcagtgagg
ccgagagcgggtagaaacccccgagagcagctgcgggaaaaactgtcccgacccaaccat
gctgtgtacaccccgaacaggaggctttcatttgcaggggagccgctgggcacaccgggc
agattcaccatcaccccccagcgccactatcccctgcagcagccaggtgtctcctcagtg
ggagtcctgcctcccgtcaagtgggatggcttcaggaagaagaacatcctcagcccccgt
aactcgccggccgccctcagccccgttacggtgaagatcgcccggccggaccaccacagc
tcccccagtttaaaccatctgagttgtgcagggctccccagggccccagtggacccctgc
tccagagaaagcgtgctcaaggtgctgaaggaaagccgcaagagagaagtggaagatgag
gacaaaagcttcacaactgagcagaaaagcaaaagaaggcgtaatgacagcggtggaagt
acacattctgcttttgagacgcttctgcccaacggggcaccgtcacagctggtccctaag
ccaggtaacctgaaaagaggggtaccctcccttgcggaagactccatcatgaagaggtct
cgcacgtcctccatcagctctggcagtggggtgcacgccccaagaggaacccccggcaca
aggaggaaccctatccagagctcctacagttcttccctaggcctcagccagcggaagaag
cggtcggcacccagctccccgctgtccagcccgggatcgtcccgcccgcagactccagag
ggagtttcaaagagacccagagaggacagcgggccgtctccgggtgcagcgtcctcggtg
aggtcagaccagacggcctcaaacaaggcacctgtgacttccaaactgactccggtaccc
aaggtcccattcactacctcagctgactctactgggagcggtggaaagaggaaacggaag
atccagctggtgtccagcaaccgggatgaccatatatctctgcccccgcctccggagctg
ggctacaccatcactgtgaaagacctggatgaagagaagaaagctgccctcagcaagatc
cagaaggtcctggagacacccgcttctgagccagagaagtctgcctccccaccggcagcc
acccttacctcccagctggggacctcatacaacaccaccaccaccacccttagcagcctg
ctggcagctccgctgcccacagcctccagctctgccatcccagtcatcaacctggacccc
agcccgatcagcagcgccagcacgaccaccgcggcctccaacccgctgctggaggccctg
aagatgaagatcagtattccgtctagctctacgtctgctgccaacactgctacagtgtct
gcaacaaccactccggtgctttccgggggcttaaccctgaaggtttctacgccgtcagcg
accccgcagcgccctgcggcctcccagtcctcttctgccttcgctctcgtgctgggtcag
gtctccaaggcttcgggcggcgcgctgcctgtgaccggatcaaacctatttggattagcc
agtccgatcagcacccctgctgggtcttcaccttcctacccgcccagcgctgctgtggcc
gctccagccggtagcttggcgtccgtcagcagtgccaaccctctgctggcttcagggttc
aagccaattttttctgtcaccgccgcaaatgccaccaccacctcggcagctacgtcagcc
actgagagcaaacctcccgccggtaattttacgcccatctttggcgctgccactgcgggc
gccggctttggacagcctcccccctacagcaccacgaacccggcttctacggtgtctttg
agtagtgtgtcctcgatgtttggctcaacaagcagcaccgtcgttacatcatctggtttc
cccggcatgaccagtctccccacttccgcagccaccactggctccatcaccgccacacag
cccacagcccagccagccgtgaaatccctcttcggcaactggtcagcaccatccacgacg
agcaccagctcagcctcggcgcagtcctccaatactgggagcccgttccagtttggagcc
gctaccacaacggctgcggccgcccccgctgctgccgctaccacgacctccagcaatagc
ggcttctctttcggtgccgcacagcaagacccacaagcagccaaccagaaggtgtttccc
tttgcccattcagcgcccggccagaacaccaccactgcttcatttggaggtttcgccatg
gccagcgcggcctccaccaccaccgccgccgccagccagtccaacttcacctttggaaag
ccgtcgcttcaagcacctcaggctacaccggcatccttcggctcctcagcggctccggcc
acgcaggcgaccttcggctcctcagcggctcccgccacgcaggcgaccttcggctcctca
gcggctccggccacgcaggcgaccttcggctcctcagcggctccggccacgcaggcgacc
ttcggctcctcagcggctcccgccacgcaggcgaccttcggctcctcagcggctcccgcc
acgcaggtgaccttcggctcctcagcggctccggccacgcaggcgaccttcggctcctca
gcggctccggccacgcaggtgaccttcggctcctcagcggctccggccacgcaggcgacc
ttcggctcctcagcggctccggccacgcaggtgaccttcggctccacggctccggccacg
caggtgaccttcggctccacagcgccgtccaccttcggctctgtgacggcagcaccaaaa
cagttctccttcggaggcagcgggccagcctcatccacacccgctcccaacaccgccccg
cctcctttccctttcgggtctgccgctgtccccacaactaaaccggcgtttggagccagc
tccgctggtttcgcttttggtgtcaccacggctccctcggccgcagcttctgctccgccg
agtttcggtgcaacaagccagactcagagcgccccctcggccaccttcgcattcggccgt
gctgctcctcagcaggcacccgccggcgccgcccagccagctcccggcgggtttaacttt
ggtgctgctatgccgtgcccccagtttggaaccccggtctccaataatcctgcaccacag
atgggaagcttcaactttggggctgctgctacagacaaaccagcttttgggacgtctacc
ccatccttcggccagagtgctgtttctgctgcaggtccaattccctttggcagccctgca
actccagtccaaaacttcaacgctggtccttttggttccccggcggctccctccttctct
attggagcgggatcgaagccatccggagctcgccagaggctgcaggcgcggaggcaacac
aacaggaagaagtag
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