Pungitius pungitius (ninespine stickleback): 119215472
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Entry
119215472 CDS
T07626
Symbol
lrwd1
Name
(RefSeq) leucine-rich repeat and WD repeat-containing protein 1
KO
K24733
leucine-rich repeat and WD repeat-containing protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119215472 (lrwd1)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
119215472 (lrwd1)
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Gene cluster
GFIT
Motif
Pfam:
WD_LRWD1
LRR_LRWD1
WD40
Beta-prop_EML_2
LRR_8
WD40_CDC20-Fz
LRR_4
WD40_Prp19
LRR_9
Beta-prop_SPT8
DUF6266
Beta-prop_RIG_2nd
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
119215472
NCBI-ProteinID:
XP_037323567
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Position
16:15315628..15323290
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AA seq
754 aa
AA seq
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MLQDKLMNCLKAMEKITEKLLLEKGSPKSNKLEQIKTLNLSGLGLKPQDLPVRLLSRLRS
LERWDLSGNSLQAFPKSLELPALCYLDLSDNQMEDVTTLEPLSSLQELKMEDNLYITVSD
NYKLMVLLPKLRIYNGKDVSTSANHLRFVYSENLRTRIIAVWEKSFSLPDPITAEKLSAL
EKSFVSTARQQVKYGPSSVSDFTKWRVEIIAKEYLRSLTEPKEEPECKASTDTKESSTVS
TPTKRKQNPSVDTNIRLTPRKKLRSDLPASPAGASPCKSALSRKLQTLSQSPAVRVSPRK
LNQPPATPPGAQTGAQAPRRGPKVRQAKEDAGAQTKLKNGAEPRRDADWLSSMKSCSKTP
PVRLKPLHVLQCHSKQDSSEDFSTQLWACAFQPLPDTTGAGGGSRLVATCGGDSLCVIDC
ETGIVMKKYKVPGEEFFSLSWSTVLMSRGGGASAARHCSVLAAGGKRGLVKLIHPRNNVA
YGEFRASRKALSVLRFNHHQGNFLFTGSYDNKIVLWDIGGVDSQYNYKVVQLLVLDISTT
PLHICLPPASPSSHLLTACEDGLLCYDTRLGSSNSTTKRTKEMEITFPIYKKEDKDHDYH
TIDGLSFLTDDIVASKNYMHCSIYLWSWGGTKAQRPDKKDRSVCAVVLAELQWANTEIPY
LALNTCPGQAYVVCGDDKGRLWTYNISKLQKSSLHTGKPILPTEMLEWPTPVRKNHGQVE
GPSINSVAMDPELHFLVALSDRNMVIVWKREESV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaagacaagttgatgaactgtctaaaagcaatggagaaaataacagagaagctg
ttactggagaaaggctctccaaaaagcaacaaactggagcagatcaagacactgaattta
tccggcctgggactgaagccccaggacctgcctgtgcggctgctgtcccgcctgcggtcc
ctggagcgctgggatctctctgggaactccctgcaggcgtttccgaagtcgctggagctg
ccggcgctttgctacctggacctcagcgacaaccagatggaggatgttaccacgctggag
cctctcagcagtctgcaggagctcaagatggaggacaatctttatatcactgttagtgat
aattacaagttgatggtgttgttgcccaaactgaggatttacaacggtaaagatgtcagc
acctcggccaaccacttgcgctttgtctacagtgagaacctgaggaccaggattattgca
gtgtgggagaagagcttctctctcccggatcccatcacggcggagaaattgtccgccttg
gagaaaagctttgtcagtaccgcccgtcagcaggttaaatatggacccagttcagtcagc
gacttcaccaaatggagggtggagattattgctaaggagtatctgcgctctctgaccgaa
ccaaaggaagagccggagtgcaaagcctccacggacactaaagagagcagtacggtctcg
acgcctacaaagaggaaacaaaacccatccgttgacaccaacatacgcctgacgcctcgc
aagaaactgcgctccgacctcccggcctccccagccggagccagtccctgcaagtcggcc
ctgagccgcaaactgcagacgctgagccagagccccgccgtcagggtgagcccccgcaag
ttaaatcagcctcccgccacgccgcccggggctcagacaggggcgcaggcgccgaggaga
gggcctaaagtgcgacaggccaaggaggacgccggggctcagacaaaactgaagaacgga
gcggagccgcggagggacgctgactggctgtcctcgatgaagagctgcagcaagacaccg
ccggtgcgcctgaagcctctccacgtcctccagtgccacagcaaacaggacagctcggag
gacttctccacccagctgtgggcctgcgccttccagccgctgccagacaccacgggtgct
gggggagggagccgtttggttgctacctgtggcggagactctctctgtgtgattgactgc
gaaaccggtatagtgatgaagaagtacaaagttcctggagaggagttcttctccctctcc
tggtccaccgtgctgatgtccagagggggcggggcctcggctgctcgacactgcagcgtc
ctggcggccggtgggaagagggggctggtcaaactgatccaccccagaaacaacgtggcc
tacggggagttcagggccagccgcaaggcgctgtcggtcctccgattcaaccaccaccag
gggaacttcctgttcactggctcatacgataacaagatcgtgttgtgggacatcggagga
gtggacagccagtacaactacaaagttgtacagctgctggtgttggacatcagcaccacc
cctctgcacatctgcctcccccccgcttcccccagctcccacctcctgacggcctgcgag
gacggcctgctctgctacgacacgcggctcggcagcagcaacagcaccacaaaaaggacc
aaagagatggagataacgttccccatctataagaaagaagacaaagaccatgactaccac
accattgacggccttagttttcttacggatgacatagtggcctccaagaactacatgcat
tgctccatttatttgtggagctggggcgggaccaaggcccagcggcccgacaagaaggac
cggagcgtttgtgctgtggttctggctgagctgcagtgggccaacactgagattccctac
ctggctctcaacacctgcccaggccaagcctacgtagtgtgtggtgatgacaaaggcagg
ctatggacatacaacatatccaagctgcagaaaagcagtctccacacagggaaacccatt
ctccctactgagatgttggagtggccgaccccggtgaggaagaaccacggccaggtggag
ggcccctccatcaacagcgtagcaatggaccctgagctccacttcctggtggccctaagt
gacagaaacatggtgatcgtgtggaagagggaggagtccgtctga
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