Pungitius pungitius (ninespine stickleback): 119215514
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Entry
119215514 CDS
T07626
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119215514 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119215514 (taf6)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119215514 (taf6)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119215514 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
119215514 (taf6)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119215514 (taf6)
STAGA complex
119215514 (taf6)
TFTC complex
119215514 (taf6)
SAGA complex
119215514 (taf6)
SLIK complex
119215514 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CENP-S
TFIID-31kDa
Bromo_TP
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
119215514
NCBI-ProteinID:
XP_037323636
LinkDB
All DBs
Position
16:9397061..9402242
Genome browser
AA seq
638 aa
AA seq
DB search
MAEERRQKQCSVSLPTESMKAMAESVGVGQLQEESCAALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTNDIDNALRLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIDGVQPSIPENPPPAPKEQQKVESTEPLKIVKPGQEEDGKIQG
KTQGATAADGKGKEKGLIRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIAT
DPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAV
VTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDEKT
QWTTRYGCIAGLSELGPDVIKTLILPRLTIEGARIKGVVEGPVVSNIDKIGADHVQSLLL
KHCASVIAKIRPQPDIAEQYRTDYGYLGPMLCSHVMKARTQAALQAQQVNRTTLTITQPR
PTLTMSQSGFSGSAGPRTPSIIKVPSSLTLMSPRPGTPSQPSPPATKYIVMATSAGSAST
QQVITLSSSQSATPVTSTVPSATSTLQPLVKLEGGGGPGLTGSRPVQKYIVVSLPSSASS
SLETKSSVLPTSISSNPLESAVKLDRSESPGASTQSPH
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaacgtcggcagaagcagtgttcagtgtccctgcccacagagtccatgaag
gccatggccgagtctgtgggagtggggcagttgcaggaggaaagctgtgctgcactaagt
gaagaagtcagctacagaataaaagaaattgcacaggatgctcttaaattcatgcatcac
gggaagagacgtaaattaaccaccaacgacatagataatgctctcagactaaaaaacgtg
gagcccctttacggattccagtcgcaagaatttatccctttccgctttgcaagtggtggt
ggaagagagcttcatttctatgaggaaaaggaggtcgacctcagtgacattattaacaca
ccgctccccagagtaccactagatgtgtccctcaaagcccactggttaagcattgatggg
gtgcagccttctattccagaaaatccaccgccagcaccaaaagagcagcaaaaggttgaa
tctacagagcccctcaaaatcgtcaaacctggtcaggaggaagacggtaaaattcaaggc
aagactcaaggggcaacagcggctgatggcaaaggaaaggagaagggtctaataaggttg
aagccgcgtagcactcacgagctgtctgtggaacagcagctctactacaaggagatcaca
gaagcgtgcgtgggctcctgcgaggccaaaagagctgaagctctacaaagtattgccacc
gatcctggactttatcagatgcttccaagattcagcacattcatttctgaaggagttcgg
gtgaatgtggtgcagaacaacttggctctgctgatttatttaatgcgcatggtcaaagct
cttatggacaaccccaccctgtatttggagaaatacctgcatgagctcatcccagctgtt
gtgacgtgcatcgtgagtaagcagctgtgtttgcgaccagatgttgacaaccactgggct
ctacgagactttgcggctcgcctcatggcccagagctgtaaaaccttcagtactacgacc
aacaacatccagtcccgtattaccaagacttttaccaagagttggttggatgagaaaacg
cagtggacgacacgttatggctgcatcgctggactttctgaactaggacctgatgtgata
aagacgttgatccttccgaggctcactatagagggggctcgcatcaaaggagtggtggaa
ggaccagtggtctccaacattgataagataggcgctgaccatgttcaaagcctcttgctg
aaacactgtgcaagtgttattgccaagatccgacctcagcctgacatcgctgaacagtat
cggactgactacggttaccttgggcccatgctctgctcccatgtaatgaaggccaggacg
caggcagcactgcaagcccagcaggttaacaggacaacattaacgatcacacagcctcgt
cccaccctcactatgtcacaaagcggctttagtgggtcggcagggccgcgcactcccagc
atcattaaggttccaagctccctcaccctgatgtctcctcgaccggggaccccgtcacag
ccatctcccccggcaacaaaatacattgtcatggcgaccagtgctggatccgcttcaact
cagcaggtaatcaccctcagctcttcccagtcagccacaccagtcaccagcactgttccc
agtgccacttcgactttacagcctctggtaaaactggaagggggcggtggacctggactg
acaggttcccgacctgtgcagaagtacatagttgtatctttgccctcgtccgcctcttcc
tccttggagactaagagctctgtgctaccaacctcaatttcctcaaacccactcgaaagt
gcagtgaagctagaccgctccgagtctcctggagcgagcacacagtcgccacactga
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