Pungitius pungitius (ninespine stickleback): 119215543
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Entry
119215543 CDS
T07626
Name
(RefSeq) RNA-binding protein 4-like isoform X1
KO
K13189
RNA-binding protein 14
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119215543
Spliceosome [BR:
ppug03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119215543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
DbpA
Motif
Other DBs
NCBI-GeneID:
119215543
NCBI-ProteinID:
XP_037323675
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All DBs
Position
16:complement(9605193..9612740)
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AA seq
542 aa
AA seq
DB search
MSGENVKLFVGNLPLDATHDELTKLFCPYGEINTCSLLRQYAFVTLKGEGAADRAIRHLD
GKEYRGRPLVVEESRARPPNSTKVFVGNLAATCSADDLHGLFSTFGRVLDCDKVKARLCS
NVGYAFVHMERKEEALVAIDALNGTMYKGRQLAVELSKAQPLINQIAMAGNLNNPGGGSA
GGREGLLPRPPPSLEHHQSQAAVLAAAAAAAAGLPIQVQQSVHNSFYNTTSFDPTYAALK
GITSAKGADGVIYGALASQVYGSVADQVYQDMANHNPATVTAVEEVEPQGGPDPTTLFEA
ARAKFFQEGQKVLAEQQAGRKAASAESERDRSPIRGNRVPLLPDPVPGSFGQIRPKRRAL
LPTPPGIPEESQVADTTPEGSDPVARSYTEYYQQMHQYQQYQQYQQQYQYLQYAYTNPPP
PPPPPPSTTQAQASSTAPPGTYSAPPTYAATGAYAPPGTYDTSGSYASAGSYNASSGNYD
TSSGGYDAPGSYGAPGAYDSSGAYAAAGSYSASTPYEQTPAHGQPMPQRHDYPYHTPEPP
YR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgagaacgtgaagttgtttgtcgggaaccttcctttagatgcaactcacgac
gagttaacgaagctgttttgtccttatggagagatcaacacctgctctttgctcaggcag
tatgccttcgtcacgctgaaaggcgagggggcagcagacagggccatccgacatctcgat
ggcaaagagtacagaggcaggcctttggtggttgaggagtcacgtgcgcgcccacccaac
tccaccaaagtgtttgtggggaatctcgctgcaacatgttcagcggatgacctgcacggg
ttgttctcaacctttggaagagttttagactgtgacaaagtcaaagccagattatgctca
aatgttggctatgcgtttgtgcatatggagaggaaggaggaggccctggtcgccattgac
gcactcaacgggaccatgtacaagggccgccagttggccgtagagctctccaaggcccaa
cctttgatcaaccagattgcaatggctggtaatttaaacaatcccggtggtggatcagca
ggaggcagggagggacttcttccgcgaccacctccatcactagagcaccatcagagtcaa
gcagctgtgctggcagcagctgcagcagctgcggctggactacccatacaagttcaacaa
agtgtccataattccttctacaacaccacatcttttgaccccacttacgctgctttaaag
ggcattacaagcgctaaaggtgcagatggggtgatatatggtgctctagctagccaggta
tatggatctgttgccgaccaggtgtaccaagatatggccaatcacaatcctgcaactgtc
accgcggttgaagaagtagagccacaaggtggaccagatccaacgacgcttttcgaggca
gcaagagcaaagttctttcaggagggacagaaggttctggcggagcaacaggcagggaga
aaagcggcatctgcagagagtgagcgagaccgcagcccaatcagaggaaatcgggtcccc
ctcctccccgaccccgttccaggttccttcggtcagatacgacctaaacgccgcgccctt
ctgccgacgccccctggaatacctgaagagtcccaagttgctgacacaacacctgaaggg
tcagaccctgttgctaggtcgtacacagagtactaccagcaaatgcatcaataccaacag
tatcaacaataccagcagcagtaccagtacctccagtatgcctacaccaatcctcctcct
cctccgccgcccccaccatccaccacacaggcccaggcctcctccaccgcgcccccgggg
acgtactcggcgcccccaacgtacgcagcgacaggagcctacgcgccgcctggaacatac
gacacctctggaagttacgcctcagccgggagctacaatgcttcatctgggaactacgat
acctcgtcaggaggctatgacgcacctggaagctatggggcacccggagcatatgattca
tcgggagcttacgcagcagcgggaagctactccgcatccacaccgtatgagcagacaccc
gcacacgggcaacccatgcctcagcgccatgattacccttaccacacgccagaaccccct
tatcgatag
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integrated database retrieval system
