Pungitius pungitius (ninespine stickleback): 119215550
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Entry
119215550 CDS
T07626
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119215550 (smc4)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
119215550 (smc4)
Condensin II
119215550 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
NDC80_loop
AAA_29
TPR_MLP1_2
SPAM
Crescentin
ABC_tran
Motif
Other DBs
NCBI-GeneID:
119215550
NCBI-ProteinID:
XP_037323689
LinkDB
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Position
3:complement(10114699..10130594)
Genome browser
AA seq
1293 aa
AA seq
DB search
MPSKTAKSSTAKPRGKGSQPRDDSGDELDGTPQETDPSGQEDARPTTDPSQGEAVDNRSL
EEILGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYEGEKVLGPFHKRFSCIIGPNGSG
KSNVIDSMLFVFGYRAQKIRSKKLSVMIHSSDKHKDVQSCTVEVHFQKIIDKEGDEYEVI
PNSKFYVSRTANKDNSSAYYINGKKATFKEVGALLRSHGIDLDHNRFLILQGEVEQIAMM
KPKGQTEHDEGMLEYLEDIIGSCRLKDPILTLSRRIELLNEQRGEKLNRVKLVEKEKNSL
EGEKNKAVEFLTLENDIFKHKSQLCQYYVHDLHKRVVDKEQEKQKILEDTKELTEKNAKI
SQETEKMNQELKNVEKKQNKLNKYIETQKEKFTQLDLQDVEVREKIKHSKSKNKKLQKQL
EKDKEKLEEVRGVPASSEKAISEATARKEELEKQKVKEEKKLEAVMESLKEETSGLQQDK
ETKEKELMELSKAVNETRSRMDLAQSELDIYLSRHNTALTQLNTAKQTLQTTSDTLRERR
AAIKDLEVKIPQKEQELKKDEVALEQLMKMDSETREVVSQIRQKVDEAKSSLSSNRSRGR
VLDALMQQKKSGRIPGIFGRLGDLGAIEEKYDVAISSSCGALDNIVVDTIDTAQKCVMFL
KEQNIGFATFIGLDKMKVWEKNMAPIRTPDDCPRLFDMVRVKDENVRPAFYFALRDTLVA
EDMEQATRMAFQKERRWRVVTLKGQIIEMAGTMTGGGRALKGRMGSSIGAEVSQEELNRM
ESRLNEKVSKLHDCQEKKLQLEENVQQLRRLLRDMKNTQEKYANSMTSLADQEAHLKLQI
KELEANVLAAAPDKAKQKQMEKSLEAFKKDYDAASITAGKVENEVKRLHTLIVDINSHKL
KAQHDKLDTVNKGLDDCSSTITKARVAIKTADRNLKKCEESVTRVQGEMEENDKSMTELT
EQLKKLEDEAGEVMKACQEAEAALPEVQQQYQAVLKEIKVLQQQEHAMQEESLSVRLRIE
QIETTMAEHSNKIKHWQKEATKLSLHSVEGEPAEGLPVFTADELAAISNPNVIINKMMTL
ETKSAQMKPNLGAIAEYKKKEELYLQRVAQLDEITTERDQFKRGYEDLRKQRLNEFMTGF
NMITNKLKENYQMLTQGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLS
SLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMFEIA
DRLIGIYKTHNTTKSVGINPKTITFKEHQAMTA
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgccctccaaaactgcgaagagctccactgccaagccgagagggaaagggtcgcagccc
cgcgatgactccggagacgagctggatggaacccctcaagaaaccgaccccagcggccag
gaggacgcacggccgaccaccgatccgtcccaaggggaggcggttgataaccgaagtttg
gaggagattctcggcagcatccccccacccccgcccccagcgatgaccaatgagccgggc
gctcctcgcctgatgataacacacttggtcaaccgcaatttcaagtcgtacgaaggggag
aaggttctggggccttttcacaagcgcttttcatgcatcattggtccaaatgggagtggg
aagtccaatgtgatcgattcaatgctctttgtgtttggctacagagctcaaaagatcaga
tcaaaaaagctctcagtgatgattcacagctccgataaacataaagatgtgcaaagctgt
accgtggaggtgcattttcagaagataattgataaggaaggagatgaatacgaagtcatc
ccaaacagcaagttctatgtttccaggacggcaaacaaagacaattcttcagcctactat
atcaatggcaaaaaagccacattcaaagaggtgggggctttactccgcagccatggcatt
gacctggaccacaatagatttctgatcttacagggcgaggtggagcagattgccatgatg
aagcctaaaggacagacggagcatgacgagggcatgctggagtacctggaggacatcatc
ggctcgtgtcgcctcaaggatccgatcctcaccctgtcacgccgcatagagctgctcaat
gagcagaggggagagaagctaaaccgagtgaagctagtggaaaaggagaagaattctctg
gagggagaaaagaacaaagctgtggagtttctcactctggaaaatgacatcttcaaacac
aagagtcagctctgccaatattatgttcatgatctgcacaagcgtgttgtagataaagag
caggagaagcagaagatcttggaggacaccaaggaactaactgagaaaaatgcaaagata
tcgcaagagacagagaaaatgaaccaagagctcaaaaatgtggagaagaaacaaaataaa
ctcaacaagtacattgagacccagaaggagaagttcacacagctggacctgcaggacgtt
gaagtgcgtgagaagattaagcactccaagagcaagaacaagaaactgcagaagcagctg
gaaaaggacaaagaaaagctggaggaagtgcgcggtgtaccagccagcagcgaaaaggcc
atctctgaggcgacggcacgcaaggaagagctggagaagcagaaggtgaaggaagagaaa
aaacttgaggcggtgatggagagtctcaaggaggagaccagcggtttgcaacaggacaaa
gagaccaaagagaaggagctgatggagctcagtaaggctgtgaatgagacccggtcccgc
atggacctggctcagtcggagctggacatctacctcagccgccacaacaccgctctgacg
cagctcaacacggccaagcagacactgcagaccacttctgacacgctgcgtgagcgccgt
gcagccatcaaagacttggaggtcaagatacctcagaaagaacaggagctcaaaaaggat
gaagtagcgctggagcagctgatgaagatggatagtgagaccagggaggtggtgagccaa
attaggcagaaggtggatgaagcgaagagctcgctgtcctccaaccgcagtcgaggaaga
gtcctggatgctctcatgcagcagaagaagagcggcaggatccctggaatctttggaaga
ttgggagaccttggagccattgaggagaagtatgatgtggccatttcgtctagttgtggc
gccttagataacattgtcgtggataccattgacacagctcagaaatgtgtcatgttcctt
aaagagcaaaacattgggtttgccaccttcattggactggacaagatgaaggtgtgggag
aaaaacatggctcccattcgcactccggatgactgccctcgtctctttgacatggtgcgt
gtgaaagatgagaatgtgcggcccgccttctactttgccctgcgggacaccctggtggcc
gaggacatggagcaggccacaaggatggccttccagaaagagaggcgctggagagtggtc
accctgaaggggcagatcatcgagatggctggaaccatgaccggaggaggaagagcgctg
aagggcaggatgggctcctctattggtgcagaggtctcccaggaggagctcaaccgtatg
gagagcaggctgaatgagaaagtgtcgaagctgcacgactgccaggagaagaagttgcag
ctggaggagaacgtccagcagctgcgacgactgctccgagacatgaagaacacccaggag
aaatacgccaacagcatgaccagtctcgctgatcaggaggctcacttgaaacttcagatc
aaggaacttgaggccaacgtgctggctgccgccccagacaaggccaaacagaaacagatg
gaaaagagcctggaggccttcaagaaagactatgacgcggcgtccatcacggctgggaag
gtggagaacgaggtgaaaaggctccacaccctgatcgtagacatcaacagccacaagctg
aaggctcagcatgacaagctggacacggtcaacaaggggctggatgactgctcctccacc
ataaccaaggccagagtggccataaagacagccgaccgcaacctgaagaagtgtgaggag
agtgtgactcgtgtgcagggggagatggaggagaatgacaaatccatgactgagctcact
gagcagctgaagaaactggaagacgaggctggggaggtcatgaaggcctgtcaggaggcg
gaggcggcgctccccgaggtgcagcagcagtaccaggcggtgctgaaggagatcaaggtc
ctgcagcagcaggagcacgccatgcaggaggagtccctcagcgtccggctgcgcatcgaa
cagatcgagaccaccatggccgagcacagcaacaagatcaagcactggcagaaagaggcc
accaagttgtcccttcactctgttgagggagagccggccgagggacttcctgtctttact
gccgacgaactcgcagcaatctccaatcccaacgtcatcatcaacaagatgatgaccctg
gagaccaagagtgcccagatgaagcccaacctgggggccatcgcagagtacaagaagaag
gaggagctgtacctgcagcgcgtggcgcagctggacgagatcaccacagagagggaccag
ttcaaacgcggctacgaggacctgcgcaaacaacgcctcaacgagttcatgaccggattc
aacatgatcacaaacaagctgaaggagaactaccagatgctcacacagggtggcgacgcg
gagctggagctggtggacagtttggaccccttctccgagggaatcatgttcagtgtgcgt
cctccaaagaagagctggaagaagatctttaacctgtcaggaggggagaagaccctgagc
tccttggcgttggtgtttgccctgcaccactacaagcccacgccgctctacttcatggat
gagatcgatgccgctcttgacttcaagaacgtctccattgtggcctgttacatttatgag
caaacaaagaatgctcagttcatcatcatctccctgaggaacaacatgtttgagatcgct
gatcgtctcatcggcatctacaaaactcacaacaccaccaagagcgtgggaatcaacccc
aagaccatcacattcaaagagcaccaagccatgaccgcctaa
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