Pungitius pungitius (ninespine stickleback): 119215551
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Entry
119215551 CDS
T07626
Symbol
tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119215551 (tbc1d8b)
Membrane trafficking [BR:
ppug04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119215551 (tbc1d8b)
Endosome - Golgi transport
Rab GTPases and associated proteins
119215551 (tbc1d8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
119215551
NCBI-ProteinID:
XP_037323685
LinkDB
All DBs
Position
16:7946031..7958621
Genome browser
AA seq
1133 aa
AA seq
DB search
MWLKPDEILLKNAFKLWVTEDDNEYFVLQRRRGYGDGGGGLTGLLVGTLDTVLDSTSKVA
PYRILHHTPDSQVYWSIACGVTKEEIVQHWEWLQQNIMRTLSVFDSSEDITSFVQGKIRG
LIAEEGKTSLVLEEDPEKFREALLRFEKWFELPPKEKLVTYYSCSYWRGKVPCQGWLYLS
TNFLCFYSYLLGAEVKLIISWDEIWRLEKTSNVILTESIHVLAHGEDHYFSMLMHLNETF
VIMEQLADYSVKRLFDKESFQREPALSDPLQITKRGLEAHAKSEQFRTFFRLPKEENLLE
VHESFLWVPFSHFNTLGKICLSENYLCFASQDGSQCHVIIPMREVINVEKSDASSRALTV
CMRGKRALRFSEVRGYQLLANTIRSRCGISASPQHSASSEAIRGECQSLINHFEDNPEDV
TLMVGQKDSSKAVSTEALMTVFHPQDVENLEPKMLKEKMKEQSWNIHFSEYGRGTSMFFT
RKTRDLIVRGVPEALRGELWMLFSGAVNDMATHPGYYSDLVEQSLGTSTLATDEIERDLH
RSLPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVA
VCERMLPDYFNRRIIGALVDQAVFEDLIRENLPQLVEHMTDLSFFSSVSLSWFLTLFISV
LPIESAVNVVDCFFYDGIKAILQLGLAVLDYNLGALISCQDDAEAVTILNKFFDSVTNKD
SPLPSTVQQASVGNNDRASHLKVDISELIREAYEKYGNIRTEEVESSRKRNKLHVIQTLE
DTTKQNVIRVVTQEVQFSASHLDSLYNLFKRQHFLCCYWTMKSPALLHHDPSLAYLEQYQ
LGFQQFSTLFSLLEPWAFCNSKSPLSLWVFRLIDENQDGLVNFKEFCFALDTLYSGSFTN
KLKFLFKLHLPPAFTGSPLHLKEQRIIPVAEDSSHLSRLSAFDLPEDGVIKKSPERGRGK
VDLQAYLKQWQNEILRKEETIKDLPRINQTQFIQFSKTLYNIFHGDPEEESLYRAVAHVT
SLLLRMEEVGRRLQEPSSPSESTKSADTAGAAEEEEEEPSAGEASTTPESSGSRNSQDAG
ADLTEMQWSFSFEQVLASLLNEPTIVRFFERPVDVHTKLGQARVAQLKLKANK
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcaaacccgatgagattctgctgaagaatgcgttcaaactgtgggtcacggaa
gacgacaacgagtacttcgtactgcaaaggagacgaggttacggagacggcggaggcggt
ttgacaggcctccttgtgggaactctggataccgtgttggactccacatccaaagtcgct
ccctaccgcattctgcaccacacacctgactctcaggtgtattggtccatagcatgtggt
gtcaccaaggaggaaattgttcagcactgggagtggctgcagcagaacatcatgaggacg
ctctctgtgtttgactccagcgaggacatcaccagctttgtacagggcaagattagaggt
cttattgctgaggaagggaagacatccctggtgctggaggaagaccctgagaagtttcgg
gaagcccttttgaggtttgagaagtggtttgagctgccaccgaaggaaaagctggtcaca
tattactcatgcagctattggagaggcaaagtgccctgccagggctggctctacctcagc
acaaacttcctttgcttctactcctacctgctgggagctgaggtgaaactcatcatctcc
tgggatgagatctggaggctggagaaaacctccaacgttatcctgacggagagcatccac
gtcttggcccatggggaggatcattacttctccatgctgatgcacctaaacgaaacattt
gttatcatggaacagctggcagactactccgtcaagcggctttttgataaagagtccttc
cagagagagccagcgctctccgaccccttgcaaattaccaagagaggtctagaagcccat
gcaaagagtgagcagttccggacatttttcaggctccccaaagaggaaaacctgttggag
gtgcatgaaagcttcctgtgggtgcccttcagccattttaacacacttggcaaaatctgt
ctgtctgagaactacctgtgtttcgccagccaagatggaagccaatgtcatgtcatcatc
ccaatgagagaggtaatcaatgttgagaagtccgacgccagcagcagggctctaacagtg
tgcatgcgtggcaagagggcgctgcgtttctccgaggtgcgaggctaccagctgctcgcc
aacacgatccggagcaggtgcgggattagtgcgagccctcagcactcggcatcatcagag
gccatacggggcgagtgccagtcgctcatcaaccactttgaggacaacccagaggacgta
acactgatggtgggacagaaagacagcagcaaggctgtaagcaccgaggctctcatgacc
gttttccacccgcaggatgtcgaaaaccttgaacccaaaatgcttaaagagaagatgaag
gaacagtcgtggaacatccatttctctgaatacggacgaggcacaagtatgttcttcacc
aggaagacgcgggacttgattgttcgtggtgtgcccgaggccttgagaggagagttgtgg
atgcttttttcaggggctgtcaacgacatggccactcatcccggctattactccgatctg
gtagaacagtccttgggcacaagcactttggctacagatgagattgagagagacctgcac
cgctctctgccagagcacccggcctttcagagcgacacaggaatctcagctctacgcaga
gtccttaccgcctacgcatacaggaaccccaaaattggctactgccaggccatgaacatt
ctcacctcagttcttctgctctacgccaaagaagaggaggctttctggctcttggtagcc
gtctgcgagaggatgttgccagattacttcaaccgccgaataattggtgctttggtcgac
caagcggtgttcgaggatctgatcagagaaaacctcccccagctggtggagcacatgaca
gacctgagtttcttctcgtccgtgtccttgtcctggttcctcacgcttttcatcagtgtc
ctcccgatagagagtgctgtgaacgtggtggactgttttttctacgacggcataaaagcc
atcttgcagctgggcctggcagtgctggactacaacttgggggctctgatcagctgccag
gacgatgcagaggccgtcaccatcctcaacaaattctttgacagcgtgacaaacaaagac
agcccccttccatcaacggtgcagcaagcttcagtgggtaataacgatagagcctcgcac
ctgaaggtggatatcagtgaactgatccgagaggcctacgagaaatatggaaatatccgt
acggaggaagtcgagagttcacgcaaaagaaacaaactgcacgtgatccagacactggag
gacacaaccaaacaaaatgtgattcgtgtggtgacccaagaagtccaattcagtgcctca
catctcgacagcctttataacttgttcaaaaggcagcatttcctgtgctgctattggaca
atgaagagtccagcgctgctccatcatgaccccagcctggcctatttggagcagtaccag
ttgggtttccagcagttcagcaccctcttctctctgctggagccctgggctttctgcaac
tccaagagccccctctccctctgggtcttccgcctgatcgacgaaaaccaagacggcctc
gtcaactttaaagagttctgctttgccctcgataccttgtacagtggctcgttcacaaat
aagctgaaattcctcttcaagctgcacctgccaccagcttttacagggagtcctttgcac
ttaaaggaacaaagaattattcccgtggctgaagactcttctcacttgagtagactctct
gcgtttgatctaccagaagatggcgtgattaagaaaagccctgaaagaggtagaggaaaa
gtggacctacaggcctacctgaaacaatggcagaacgaaatacttaggaaagaggaaaca
attaaagacctaccccgcatcaatcagactcagttcatccagttctccaagactctgtac
aacatctttcacggcgatccagaggaggagtctctataccgagccgtggctcatgtgacc
agtctcctcctgaggatggaggaggtgggacgcaggctgcaggagcccagcagcccgtca
gagtccacgaaatccgccgacactgccggcgctgcggaggaggaggaggaggagccttcg
gcgggagaagcttctaccaccccggagagctccggctcccgcaacagtcaggatgctggg
gccgacctcacagagatgcagtggtccttttcgttcgagcaggtcctggcctctctgctc
aacgagccgaccatagtccgcttcttcgaaaggcctgttgatgttcacactaaactggga
caagcgagggtcgcccagctgaagctgaaggccaataagtga
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