Pungitius pungitius (ninespine stickleback): 119215577
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Entry
119215577 CDS
T07626
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119215577 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119215577 (nfrkb)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
119215577 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
119215577
NCBI-ProteinID:
XP_037323732
LinkDB
All DBs
Position
16:complement(13166665..13174472)
Genome browser
AA seq
1273 aa
AA seq
DB search
MDALTQMLTDPLDPKEETGEAITEECMLGNCRLNLPEDLLENPDIFFSVMSGSTWTEVLS
DSQRQHLRQFLPQFPDNNAAEQDSTIGDLFHNRNFNFGNPLHLAQKQFRDGYFNPEVVKY
RQLCAKSQRKRQVYSLQQYYHRLLKHILVSRKELLEFAVHSGLDFPSKRKLPAKTHAEMR
EPRVRRRLSRILKEVKAECGDSDASSDDDDISLWAPAPQSPSSPTPPTVSLRVLPSLSTQ
DMKTTEGIELGEQDLKSMLLNHREKRKRQPDHPDLMTSDIHLGDILSRANIGRKGAVAFF
DLSLPKKKIKDERRKKKMRTIKVESEDPCEILAPSDASSAPPAGLINSLPDTPSTPLANI
KEEIVEECQSSPVAVEEIAISFFSLLESVLRSESFTSTSLLEDKVQMWQSSPASSLNVWF
SSVPCWSDLVLQALQFLAGETKDGMMALPSGFSPFVEFSDESQQWSWIGPTQDTEKDLSA
LCQLWLDSKDLVIKTEHDDMLEMTSPTPRVSTDYVVRPSTGDERQVFQIQEQQRYNQPHK
AFTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGE
GTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRSR
SQEEFERIHQAQAAAAKARKALQQKPKPASKPKSGSKEGGGKTPGCLEAGQDVISNPMSP
TPTTPTPNTPGTPKSPLACTSSTPTKAAAPDTIKTSTGVLLVSPPSLPQLGSILPTSQPC
PPVSQPVTSQHTARLVSHLAAGSLPQVRVVSSQPGLVSSAGGHQAALVHQTSHHIRMPMA
MAAKGIPQAVVSVPLRSPSACSPGHVPTTLSVSALAKPQAGSPGGNNPSSHAMLQGVAGP
SIKQVSITGQLGMKTAGGGGIPITATNLRIQGKDVLRLPPSSITTDAKGQTVLRITPDMM
ATLAKSPVATVKLTPDFLGAAGAGKSISATLHVTPPHSSASSSAATSCAGEAKSGKAGHV
GAGLLKAAGDAAIRLMPTLAVTVADQKSRTFSSVSSGDKSGATIRIMPGLGVIPQKQGQT
ITMTTTTGSKTLTASTCANVMTMAASVVAGAKGITVAPGVSCSTLTLGTATATVRQVPAA
VVTTQPGKLPARITVPISVLNQPLKTKSVVTTPMVKGSLNTNLSSLGRNIILTTMPAGTK
LIAGNKPVSFVTAQQFQQLQQQGQATQVRIQTVQAQQLQQHMASGSGPKSVSTVVVTTAP
SPKRAPDPPAAPQ
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggacgccctaacccaaatgctcaccgatcctttggatccaaaagaagaaaccggtgaa
gcaatcacagaggagtgcatgctggggaactgcaggttaaaccttccagaggacctgctt
gaaaaccctgacattttcttctctgtgatgagtggaagcacctggactgaagtgctttca
gattctcagaggcagcaccttcgtcagtttttgcctcagtttcccgacaacaacgccgcg
gagcaggacagcaccatcggtgaccttttccacaacaggaacttcaactttggaaacccc
cttcatctcgctcagaaacaattccgagatggttacttcaatccggaagtggtcaagtac
agacagctgtgtgccaagtcccagaggaagagacaggtgtactcccttcagcagtattac
caccggcttttgaagcacattcttgtctctagaaaggagctgctggagttcgccgttcac
agtggtctggactttccatctaaaagaaagttgccggccaagactcacgctgaaatgcgg
gagccgagggtgagaagaagattgagccgcatattgaaggaggtcaaagccgagtgtgga
gacagcgacgcttcgtccgacgatgacgacatttccttatgggctccagctccccaatca
ccttcgtctccgacgccgcccactgtctcgctcagagttctgcccagcctctccacccaa
gacatgaagactactgaaggaatagaactaggggagcaggatttgaaatccatgctgctt
aaccatcgggagaagaggaagcgacagccagatcatcctgacctgatgacctctgacatc
cacctcggagacatactttcaagagcgaatattggtcggaagggggccgtggcatttttt
gatctgtctctgcctaagaagaagatcaaagacgagaggaggaagaagaaaatgaggacg
ataaaagtggaatccgaggatccctgtgaaattctcgccccctcagacgcctcgtcagcg
ccgccggccggcctcatcaactcgctgccggacaccccgtctactccactggccaacatc
aaggaggaaatcgtggaggagtgtcagagcagcccggttgccgtcgaggaaatagccatc
agcttcttcagcttgttggagagcgtcttgcggtcagaaagcttcacgagcacttcgttg
ttggaggataaagttcagatgtggcagtcctctccagccagctccctcaatgtgtggttc
tcatccgtcccgtgctggtctgacttggtgcttcaggccctgcagtttcttgcaggagag
acgaaagatggtatgatggcactccccagtggattttctccatttgtggaattttctgat
gaatctcagcagtggagttggattgggcccactcaggatacagagaaggatctcagtgcc
ctctgtcagttgtggctggactccaaggacttagttataaagacggaacacgacgacatg
ctcgagatgacgtccccgacacccagagtctcaactgattatgtggtgcggcccagcacc
ggagacgagagacaagtctttcaaatccaggagcagcagcgatacaaccagccacacaaa
gccttcaccttcaggatgcacggctttgaatcggtggtgggtcccgtcaaaggggtgttt
gataaggagatgtctctgaacaaagccagggagcacacgttgctccgttcagaccgacca
ccatacgtcaccattctctctctggtgcgcgatgcggcagcgcggctccccaacggggaa
ggaacgagggccgagatctgtgagctgctgaaagactcccagttcctggctccagatgtc
accagtgcacaggtgaacacagtggtcagcggtgccctggatagacttcactacgagaaa
gacccctgcgtgaagtacgacatcggccgcaagctttggatttacctgcaccgcagtcgc
agtcaagaggagttcgagaggatccaccaggctcaagctgccgctgcaaaagcaagaaaa
gccctgcagcaaaagcccaaacccgcatctaagcccaagtccggaagcaaggagggaggc
ggcaaaaccccaggatgtctggaggcgggacaggatgtgatctccaatcccatgtcgccg
accccaacaacacccaccccaaacacacctggaaccccaaagtcacccttagcctgcacc
tcctccacaccaacaaaggccgccgcccccgatacaatcaaaaccagcacaggcgttctt
ctcgtgtcccccccctcgttgccccagctgggaagcatcctacccaccagccagccgtgt
ccaccggtgtcccagccggtcacgtcccaacacacggcccgcctggtgagccacctggcg
gccggctccctcccccaggtgcgggtcgtctcctcgcagccgggcctggtttcttcggcg
gggggtcatcaggccgctctggtgcatcagacctcgcaccacatcaggatgccgatggcg
atggcggccaagggcattccacaggcggtggtttctgtgcctctgaggagtccgtcggcc
tgcagtccgggccacgtgccgaccaccctgtccgtgtccgccctggccaaacctcaagcc
ggatcgcccggcggcaacaacccttcctcccatgcgatgctgcaaggagtcgccggcccg
agtatcaagcaggtgtccatcacaggccagttgggaatgaagacggccggtggcggaggg
atcccaataacggccacaaacctgcgcatccagggcaaagacgttctccgcctgccgccg
tcctccatcaccacggacgccaagggacagacggtgctgcggatcaccccggacatgatg
gccaccctcgccaaatcccccgtcgcgaccgtcaagctcacgcccgacttcctgggcgcc
gccggcgccggcaagagcatatcggccaccctccacgtgacgccgccccactcctcagcc
tcctcctccgccgccacgtcctgcgcaggggaagcgaagagcggcaaggcgggccacgtc
ggcgccggcttgctgaaggcggcgggagacgcggccatacgactgatgcccacgctggcg
gtgaccgtggccgaccaaaagtcccggaccttctccagcgtgtcctccggcgacaagagc
ggcgccaccatacggataatgccggggctcggcgtcattccgcagaaacaagggcagacc
atcaccatgacgaccaccaccggcagtaaaaccctcacggcgtccacgtgtgccaacgtg
atgaccatggcggccagcgttgtggccggtgccaaggggatcacggtggcgcccggggtg
tcgtgctccactctgacgctaggcaccgccacggccaccgtgcggcaggttcccgccgcc
gtggtcaccactcaacccgggaagttacctgcgaggataactgtgcctatttcagtcctg
aaccaaccactgaagaccaagagtgttgtgaccacaccgatggtgaaaggaagcctgaac
acaaacctcagcagtttgggcaggaacatcatcctgaccaccatgcccgccggtaccaag
ctgatcgcaggaaacaaaccggtcagcttcgtaacagcacagcagttccagcagcttcag
cagcagggacaggccacgcaggttcgcatccagacggtccaggcgcagcagctccagcag
cacatggcgtcgggctcgggcccgaaatctgtgtccacggtcgtggtcacaacggcgcct
tcgcccaaacgggcccccgatccccccgccgcacctcagtga
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