Pungitius pungitius (ninespine stickleback): 119215602
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Entry
119215602 CDS
T07626
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59 isoform X1
KO
K12028
tripartite motif-containing protein 59
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119215602 (trim59)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119215602 (trim59)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
TRAF3_RING
Apolipoprotein
zf-RING_10
DUF349
MgrB
Motif
Other DBs
NCBI-GeneID:
119215602
NCBI-ProteinID:
XP_037323779
LinkDB
All DBs
Position
3:10110488..10114425
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AA seq
449 aa
AA seq
DB search
MIAALGRNVPPCRRSCSAQSPSAKPGPLASAMDNLEEDLTCSVCYSLFSDPRVLPCSHTF
CKACLDNLLRSSTNYSIWRPLRLPLKCPNCRSVVELPPLGVDSLPTNVSLRAIVEKYQSD
GAPRQPSCQEHHRQPLNMYCIQDRQLICGLCLTVGRHQGHPIDDLQAAFIREKRTPSQLL
ARLSEQRWAQVCELGEQLEQEKARCEGLVSQDRREVDQFFQALEAVLARKRHAYLEALDQ
AGAEVCEAYDPLIRRVKALQEEQLDLVSLGSSVEEEDSPLVFLEEVHVFRERVEEFIKTP
LPSVLNLSLTPRAAEHLQQHWPAVTIGSLEDAPVPTVCCCSRCGAAAEADAGGSDGTDGW
ARRVLLLGLLLLLAAAAMWVEPDGLSLLSHWSQLVHELSSELMMSVCQTAESAQAVLQAA
VDGWRSRLSSVGEEASQQLAALFKSLTSH
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgatagccgcgctgggccgaaacgtccctccgtgcagacgatcttgttctgcccaatcc
ccatcggcgaagcccgggcctctagcctccgccatggacaacctggaggaggacctgacg
tgctccgtgtgctactcgctgttctctgacccgcgcgtcctgccgtgctcccacaccttc
tgtaaggcctgcctggacaacctgctccgctcgtccaccaactactccatctggcgtccg
ctgcgcctgccgctaaagtgccccaactgccgcagcgtggtcgagctgcccccgctgggc
gtagactctctgcccaccaacgtgtcgctgcgagccatcgtcgagaaataccagagcgac
ggcgcgccgcggcagccttcctgccaggagcaccacaggcagcctctcaacatgtactgc
atccaggatcggcagctgatctgcggcctgtgtctgactgtcgggcggcaccagggccat
cccatagatgacctccaggcagctttcatcagggagaaacggacgccatcgcaactgctg
gccagactctccgagcagagatgggcacaggtgtgtgagctcggggagcagctggagcag
gagaaggcccgctgtgagggtctcgtgagccaggaccgacgggaggtcgatcagttcttc
caggcgctggaggcggtgctggccaggaagagacacgcctacctggaggccctggaccaa
gctggcgcagaggtgtgcgaggcttacgacccgctcatccgcagagtgaaggccctgcag
gaagagcagttggacctggtgtccttgggttcgtcggtagaggaggaggactccccgctg
gtcttcctggaggaggttcacgtgttcagagagcgggtggaggagttcattaaaaccccg
ctgccctcggtgttaaacctctccctcaccccgcgcgcagcggagcacctgcagcagcac
tggcccgccgtgaccatcgggagcctggaggacgcgcccgtcccgacggtgtgctgctgc
tccagatgcggcgccgcggcggaagccgacgccggaggaagcgatgggaccgacggctgg
gcgcggcgcgtgctgctgctggggctgctgctgctgctggcggcggcggcgatgtgggtg
gagccggatggactctcgctgctctcgcactggagtcagttggtccacgagctgagcagc
gagctgatgatgtcggtctgtcagacggcggagtcggcgcaggcagtgctgcaggccgcc
gtggacggatggagatctcgcctctcttcggtgggcgaggaggcctcgcagcagctggcc
gcgttatttaaaagtctgacgtcccactga
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