Pungitius pungitius (ninespine stickleback): 119215890
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Entry
119215890 CDS
T07626
Symbol
irf1b
Name
(RefSeq) interferon regulatory factor 1b
KO
K09444
interferon regulatory factor 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119215890 (irf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119215890 (irf1b)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
119215890 (irf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
119215890
NCBI-ProteinID:
XP_037324309
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All DBs
Position
16:complement(17750068..17753254)
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AA seq
292 aa
AA seq
DB search
MPVERMRMKPWIEKKIESNSISGLSWVDRDKKIFSIPWKHAARHGWEMEKDAVLFKQWAI
HTGKHVEGQECDPKTWKANFRCAMNSLPDIEEVKEKSVHKGHQAVRVFRMLPARPKSRDK
RCKGKETKARRKNSRIKKEEEDDSDAPTYESMQLAPSTQENTVDSTVQTDMLGLPVLPLS
EVPDWSCSMDIDSGFTNNFCQRFEVSPEHSSDFDYTEDIVQICQQLEKDPHCRMGGMDGT
GFLSNEACTSPGSHWSESSSVDELEETPQYLTLGSDMAPATDNIWRSFFQQS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgagaggatgaggatgaagccgtggatcgagaagaagatcgagtccaactcc
atctcaggcctgagttgggtggacagggataagaagatattctccatcccctggaagcac
gccgctcgccacggctgggagatggagaaggacgccgtcctgttcaaacagtgggccatc
cacacagggaaacacgtggagggccaggagtgtgaccccaagacgtggaaagccaacttt
cgctgtgcgatgaactcgctgcccgacatcgaggaggtgaaagaaaagagcgtccacaaa
gggcaccaagcggtgcgcgtgttccggatgctgcccgcccgccccaaatctagagataaa
cgatgcaaagggaaggagacaaaggccaggaggaagaactcaaggatcaagaaggaggag
gaggatgacagcgacgcccccacgtacgagtccatgcagctcgccccgtccacccaggag
aacacggtggacagcacggtgcagactgacatgctcggtctccccgtcttgcctctgtcc
gaagtccccgactggagttgttcgatggacatcgactccggctttacaaacaacttctgc
cagcggttcgaagtctcccccgagcacagctccgactttgactacaccgaggacattgtg
cagatttgtcagcaactagagaaagacccacactgccggatggggggcatggacggcacg
ggcttcctgagcaatgaagcatgcactagtccaggcagccattggagcgaatcgtcctca
gtggacgagctagaggagacgccgcagtatctgaccctgggctcggacatggcgccggcc
acggacaacatatggaggagcttctttcagcagtcgtga
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