Pungitius pungitius (ninespine stickleback): 119215912
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Entry
119215912 CDS
T07626
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X2
KO
K18440
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119215912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119215912
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
119215912
Endosome - Golgi transport
Arf GTPase associated proteins
119215912
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
119215912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
ArfGap
PH
Orbi_VP7
PH_12
Zf_1st_IFT121
DUF1636
Motif
Other DBs
NCBI-GeneID:
119215912
NCBI-ProteinID:
XP_037324361
LinkDB
All DBs
Position
16:complement(18777629..18792714)
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AA seq
1116 aa
AA seq
DB search
MTPPPHPVPKPRACYMKDILSSTSPLDKDMNGETLQAVVSNGIHLSTGEGAPPLLTCVGS
DCGAVFPTLVGVSDIITTSIPLLAGNDTPPTPLPPPSLENMVNSTHKYGLAGTASAVENP
PAAELNPASNSTPVPAANTVSLDGIMRSLDNIPSLVGIASNPAVCSMTPSPSADKYQTPS
VLSNGDAHTDVAGLSQLVMSALEQGAGVPLPPLEQAAELTEDVCKRSPHTIKEQSPYVTV
LACWASQDEADTDSSNEEEDTVVGPTPSSHPNTKDPSGCLVPTRPVPAPPRSSGHSGKPL
KQKTPRAATIRVSRKKGGGAMLTSPNAVVRASWLDVWKGFRHNVLWATLDGQLISLWKKR
TDHFSEVLFHVSSITNVKKQDKGRFSVHIKKKNYDFMAHNEEVQGGWVTSLLATRGQPSP
APPELHGPITIKDPRSRVYAAVWGHDLWIYPNKEGFQLGIASFSVPLNVALVKCTGKHSF
SLITPYKSFNLSVDSSKELAVWLDGLSLSIRSALSNSNVLLRLWENPDNKVCGDCGSANP
EWASVNLLLVICQACAGQHRALGSNLSKVRSLKMDNKVWNEPLIQLFVAHGNRLANKVWA
PAVPAAEQLSAWSSDEERSKFIQAKYKLGCYRRVHTLAFSFSLMDQRLRQVVCGDNVEET
MSLICSGAKVCPSDPQVPSSILLAERAGQSLQTELLRLNEYTDVPPYLPQNRDSASLGEE
EEELHGKLEEDRFLFSLENESAACDVLDLREVLSVFLKEGQANQFEMVTLNNQLICAADN
KEALLSHLVHILKVILPVGVSNEIMVGASAVSKVCVVDVGGSSSHSDAWLLLMEDGVSLQ
PVHKPTQQTLMMDLDMISHQEMDPTESIITMVTAERRVSLRFEEQHSCECWFSQLQTALT
NRKKAPRSTPTANQGAARRSLYPVKDFLRGSVPPAIERCISHITSFGLNVDGVYRRCGLA
TKVTKLVQSLMTSPSSTPLESDEQGVLDAASALKQYVRQQEGLIPEQQRPQWIHAAMIAD
EPSRLSSYRRLLRQLPDDNRATLNALFGHFYMVQVFSQVNRMSAQNLAVVLVPTLFQTLN
QDLLRLTREFIIHHTLLFLTPEREEEEEEEEQITVF
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactcctcctccacatcctgttccgaagcctcgagcttgttacatgaaggacattctg
agttccacctcccctctggacaaagacatgaatggtgaaactctgcaagcagttgtctct
aatgggattcacctgagcacaggtgaaggagctccccctcttcttacttgcgttgggtca
gattgtggcgccgtcttcccgactttggttggcgtcagtgacattatcaccaccagcatt
ccgttgttggctggaaacgatactccgccaactccattaccccctccctctttagaaaac
atggtgaacagtacccacaaatatggcttagcagggacagctagcgctgtggaaaaccct
cctgccgctgagttaaaccctgcttccaattctacacctgtacctgctgctaacactgtt
agcttagatggcattatgaggtcattagataacatcccgagtttagtgggaatcgccagc
aatcctgctgtatgctccatgaccccgtcaccctcagctgataaataccaaaccccctca
gtgctaagcaacggagacgctcacacagatgttgcagggttgtcacagttggtgatgtca
gccttggagcagggtgcaggagtacccttgcctccactggagcaagctgctgagctgaca
gaggatgtttgtaaacgttctcctcacaccatcaaagaacaaagtccctacgtcacagtt
ttggcctgctgggcaagccaagatgaagctgacacagactcttccaatgaggaggaagat
actgtggttggccccactccctcttcccacccaaataccaaagatccttcaggttgtctg
gtccccactcggccggtcccagcccctcctcgttcttctggccattcgggaaagcccctg
aaacagaagactccgagagcggcaactattcgagtgtccaggaagaaaggaggaggtgca
atgttaacttctccgaatgctgtagtcagagctagctggttggatgtctggaagggtttc
agacacaatgttttatgggcgacgttggatggacagctgatttctctttggaaaaaacgc
acggaccacttctccgaggtcctctttcatgtctctagcatcactaatgtgaagaaacag
gacaaaggcagattctcagttcacatcaagaagaagaattatgacttcatggctcacaat
gaggaggttcaaggaggttgggtaacatctctgctagctaccagagggcaaccaagccct
gcccccccggaactccatggaccaatcaccatcaaggacccaaggagccgggtctatgcc
gccgtctggggtcacgacctatggatttaccccaacaaggagggcttccagctgggcatt
gcctccttctctgtacccctgaatgtggccctggtgaagtgtacaggaaagcactcgttc
tccctcatcactccttacaagagtttcaacctgtctgttgattcgtcaaaggagctcgct
gtctggttggatggcctctccttaagcattcgcagcgcgttgtccaatagcaacgtgttg
ctgcgtctttgggaaaaccccgacaacaaagtgtgcggcgactgcggctcagctaatcct
gagtgggcatcagtcaacctgctgcttgtcatctgtcaggcctgtgcaggtcagcatcga
gctctgggcagcaacttgtcaaaggtgcgcagtctgaagatggacaacaaggtctggaat
gaaccactcatacagctgtttgttgcccacggtaaccggctggccaataaggtgtgggcg
ccagcagtgccggcggcagagcagctgagtgcatggtcatctgacgaggagaggtcaaag
ttcatccaggctaaatataagctgggctgctacagacgagtccacactctggccttctcc
ttctctctcatggatcagaggctgcgtcaggttgtctgtggcgacaacgtagaagaaaca
atgtctctgatctgctcgggagcaaaggtgtgtccgtcagaccctcaggtgccgtcctcc
attcttttggctgagagggccggtcagtcactgcagacagagctgctccgcctcaacgag
tacacagatgtcccaccatacctaccccagaatcgtgactccgcctccttaggtgaggag
gaagaggagcttcatggtaaactggaagaagatcgttttctcttctcgttagaaaacgag
tcggccgcctgtgatgttctggatctgagagaagttctttctgtgttccttaaagaagga
caggctaatcagtttgagatggtgactctgaacaatcagctgatctgtgctgctgacaac
aaagaggctctgctgagtcacctggtccacatcctgaaggtgattctcccagtgggcgtg
tctaatgagataatggtcggagcttctgcagtcagtaaagtttgtgtggttgatgttggc
ggatcctctagtcactctgatgcctggctgttactgatggaggacggagtcagtctacaa
cctgtccacaaacctacacagcagactctgatgatggatttggacatgatcagtcaccaa
gaaatggatcccactgaaagcatcatcaccatggtgacagcagaaaggagagtgtcactg
cggtttgaggagcagcacagctgtgagtgctggttcagccagctgcagacggctctgacc
aatcggaagaaagctccgaggagtactcccacagccaatcagggtgcagctcgtcggtcc
ctatacccggtgaaggatttcttgaggggctccgtcccgccggccatcgaacgctgcata
tcccacataaccagctttggactgaatgtggatggcgtataccgccgctgtggcctcgca
accaaagtcaccaaattggtgcagtctctgatgacatcacctagctcgacccctctggag
agtgacgagcagggcgtattagatgctgcctccgcactcaaacaatatgtccgccagcag
gagggtttgatccctgagcaacagagaccgcagtggatacacgctgcaatgatcgcagat
gaaccctccaggttatcttcttaccgacgattgctccggcaactgcccgacgacaaccga
gcaacactgaacgcactgtttggacacttctacatggtccaggtgttctctcaggtgaac
cggatgtcggctcagaacctggctgtggttctggtgccgactctgtttcaaaccctgaac
caggatctgctgagactcaccagagagttcatcatccaccacacgctgctgttcctgact
cccgagagagaggaagaggaggaggaggaggagcagatcacagtcttctga
DBGET
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