Pungitius pungitius (ninespine stickleback): 119215935
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Entry
119215935 CDS
T07626
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04080
Neuroactive ligand-receptor interaction
ppug04082
Neuroactive ligand signaling
ppug04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119215935
04082 Neuroactive ligand signaling
119215935
04519 Cadherin signaling
119215935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119215935
Ion channels [BR:
ppug04040
]
Ligand-gated channels
GABA-A
119215935
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
119215935
NCBI-ProteinID:
XP_037324396
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All DBs
Position
16:14860534..14904145
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AA seq
525 aa
AA seq
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MAVFRIRRMRCFGVWFFPLVVTVVCVQSAGVNDPSNMSLVKETVDRLLKGYDIRLRPDFG
GPPVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLW
VPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL
EIESYGYTTDDIEFYWRGGNNAVTGVDKIELPQFSIVDHNLISKNVVFSTGSYPRLSLSF
KLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETL
PKIPYVKAIDMYLMGCFVFVFLALLEYALVNYIFFGRGPQRQKRAAEKLTTANNEKMRMD
PNKWLVGNVVGRDDTLYARMKQRDLDGHDSIWEPIFVDDGAIGLGEQKNKMDPHENILLG
TLDIKNDMGISELALGLNDPRNTMLTYDSSTLQYRKAGLARHNFGRNTLECHMTQKKSRL
RRRASQLKINIPDLTDVNSIDKWSRIIFPTVFSLFNIIYWLYYVN
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgttcagaataagaagaatgcggtgtttcggggtttggttcttccctctcgtg
gtgaccgtggtgtgcgttcaaagtgccggtgtcaatgatcctagcaatatgtctttggtt
aaagaaacggtggataggctgttgaaaggttatgatatacgattgaggccagatttcgga
ggtcctccggtcggagtggggatgaacatagacatcgccagcatagacatggtgtcagaa
gtcaacatggactacacgctgaccatgtacttccagcaggcctggcgagacaagcggctg
tcctactcggagatccccctcaacctgaccttagataaccgggtggctgaccagctctgg
gtccccgacacctacttcctcaacgacaagaaatccttcgtccacggcgtcacggtgaaa
aacagaatgatccgactgcacccggacggtaccgtgctgtacggtctaagaatcactacc
accgctgcttgtatgatggacctgagaaggtatccactggatgaacaaaactgcaccctc
gagatagagagttatggctacaccacggatgacatcgagttctactggcgaggaggaaac
aatgctgtgacaggggtggacaagatcgaactgcctcagttttccatcgtggatcataat
ctcatctccaagaatgtcgtcttctccacaggttcctaccctcgtctgtcccttagtttt
aaactgaagcgaaacatcgggtacttcatcctgcagacgtacatgccttccatactcatc
acgatcctctcatgggtctccttctggatcaactatgacgcctctgctgccagggtggct
ctgggtattaccacggtgctgaccatgacgaccattaacacccacctgagagaaaccctc
cccaaaatcccctacgtcaaggccatagacatgtacctcatgggctgcttcgtcttcgtc
ttcctggctctgctggagtatgcattggtaaactacattttcttcgggcggggcccacag
cgtcagaaaagggcagccgagaaactgaccacggccaacaacgaaaagatgaggatggat
cccaacaagtggctggtggggaatgtagttggcagggacgacactctgtatgcgagaatg
aaacaaagggatctggatggtcacgactcgatctgggagcccatctttgtggatgacgga
gcgattggacttggcgaacaaaagaacaagatggacccacatgaaaacatcctcttgggc
accctggacatcaagaacgacatgggcatctccgagctggcgctgggcctcaacgaccca
cgcaacaccatgctgacctacgacagctcgaccctgcagtaccgcaaggccggcctcgcc
aggcacaactttgggcgaaacacgctggagtgtcacatgactcagaagaagagccggcta
cggaggcgcgcgtcccagctaaagatcaacatcccagacttgactgatgtaaactctatt
gacaaatggtcgaggatcatcttcccgacggtcttctccttattcaacatcatttattgg
ctttactacgtcaattga
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