Pungitius pungitius (ninespine stickleback): 119215936
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Entry
119215936 CDS
T07626
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04080
Neuroactive ligand-receptor interaction
ppug04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119215936 (gabra6b)
04082 Neuroactive ligand signaling
119215936 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119215936 (gabra6b)
Ion channels [BR:
ppug04040
]
Ligand-gated channels
GABA-A
119215936 (gabra6b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
119215936
NCBI-ProteinID:
XP_037324398
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Position
16:complement(14830444..14851419)
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AA seq
476 aa
AA seq
DB search
MLILKVDPGFLVVRCLRGMAFLLTCLCLSCYSVSGVWGNQNGDTGIYLDNITRILDRLLD
GYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDDRLKFEGPIEIL
RLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLM
NFPMDGHACPLKFGSYAYPMSEIVYTWKKGPQSSVEVPQESSSLLQYHLIGLTVSSERLK
SNTGEYVIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVL
TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELKKAAA
LKAAQEAVAAAQPAAAAAPAGIDGDVSSEASSVLKKRMNSASLFDRPAKTFPNPPVNAQA
FLQQGSAVPDNNVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMSRDPV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgctgattttaaaagttgacccgggatttctagttgtgaggtgtttgcgagggatggct
ttccttttaacttgcttatgtctgtcttgttacagtgtaagcggcgtttggggaaatcag
aacggcgataccggcatctatttggacaacatcacgcgcatattggatagattactggat
ggctatgacaacaggctgcgacctggatttggaggtccagttacagaggtcaaaactgac
atctttgtcaccagctttggaccagtttcagatgttgagatggaatacacgatggacgtc
ttctttcgccagacctggatcgacgacaggctgaaattcgagggccctattgagatcctg
cggctcaacaacctgatggtcagcaagatctggacgccggacacctttttccggaatggc
aagaggtcgatctctcacaacatgaccacccccaacaagctgttccgcatcatgcagaac
ggaactatcctctacaccatgagattaaccataaatgcggagtgtcccatgcgactgatg
aacttccccatggacggccatgcctgtccgctcaagttcgggagttatgcttaccccatg
agcgaaatagtgtacacatggaagaaaggcccccagtcctcagtggaggtgccacaggaa
tcgtccagcctgttgcagtaccacctcattggtctgacggtgtccagcgagagactcaag
tccaacacaggtgaatacgtcatcatgacggtccacttccacctgcaaaggaaaatgggc
ttcttcctgattcagacgtatattccttgcatcatgaccgtcattctggcccaagtctct
ttctggattaataaagaatccgttccagcgaggacggtgtttggtatcaccactgtcctg
accatgaccacgctcagcatcagcgcccgccactccctccccaaggtttcctacgccacg
gccatggactggttcatcgccgtctgctttgccttcgttttctccgccctgatcgagttc
gcggccgtcaactacttctccaccctgcaggccaaccgggagctgaagaaagcggccgcc
ttgaaggcggcgcaggaggcggtggcggctgcgcagccggcggcggcggcggcgcccgcg
gggatcgacggggacgtttcctcggaggccagcagcgtgctgaagaagaggatgaactcc
gcctcgctgttcgaccgccctgccaaaacgtttcccaacccacctgtcaacgcgcaagcc
ttcctgcagcagggttcggccgtgccggacaacaacgtcctgacgggcaccagcatcatc
gacaaatactcccgcatccttttcccgctctcgtttggcgccttcaacctggtttactgg
atcgtctatctcaccaaggacaccatggagatgtccagggatcccgtgtaa
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