Pungitius pungitius (ninespine stickleback): 119215938
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Entry
119215938 CDS
T07626
Symbol
msx2b
Name
(RefSeq) homeobox protein MSH-D
KO
K09341
homeobox protein MSX
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119215938 (msx2b)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
119215938 (msx2b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF6931
HTH_NDX
LodA_C
Motif
Other DBs
NCBI-GeneID:
119215938
NCBI-ProteinID:
XP_037324400
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Position
16:13974445..13976912
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AA seq
291 aa
AA seq
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MASRETSNDTGCSSSEEDSNRADSTECASEEEKKKEEEEERRSPAARRHHPFSVEALMSG
RKTDGRGGDGTRRNPEGDPVAVSPRVLSSLYLYRETRSPPGGSLKRLAAVPSSPVKSEAS
EPEDCAPWVTSGAFSTQPLHVGPGCPLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSI
AERAEFSSSLTLTETQVKIWFQNRRAKAKRLQEAELEKLKMATDAKTAAVAAAAAGGGLH
PGFTLPLSLGPVSLYGQSYSAFHHHHHRPMLPISPLGLYAAPLGYGMYHLS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcgggagacctctaacgacacgggttgcagttcgtccgaggaggacagcaac
cgcgcggactcgacggagtgcgcgtcggaggaggagaagaagaaggaggaggaggaggag
aggaggtccccggcggcgcggcggcaccatccgttcagcgtggaggcgctcatgtcgggg
aggaagacggacggtcgcggcggagacggaacccgccgcaacccggagggagacccggtg
gcggtgtctccgcgggtgctgagctccctgtacctgtaccgggagacgcgcagccctccc
ggggggagtctgaagaggctggcggccgtgccttcgtcccccgtcaaatccgaggcgtca
gagcccgaggactgcgcaccgtgggtcaccagcggcgcgttttccacgcagcctcttcac
gtcggcccgggctgtccgttgaggaagcacaagaccaacaggaagccccgcactcccttc
accacgtctcagctcctggccctggagcgcaagttcaggcagaagcagtacctgtccatc
gccgagcgggccgagttctcctcgtccctgacgctgaccgagacacaggtgaagatctgg
ttccagaatcgccgggcaaaggccaagaggctccaggaggccgagctggagaaactcaag
atggccaccgacgccaagacggcggcggtggcggcggcggcggcgggcgggggcttacac
ccgggcttcacgttaccgctgtcgctgggccccgtgtccctgtacggacagtcgtactcc
gcctttcaccaccaccaccacagacccatgctgcccatttcacctttaggactgtacgct
gctcctctgggctacggcatgtaccacttgtcatga
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