Pungitius pungitius (ninespine stickleback): 119215940
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Entry
119215940 CDS
T07626
Name
(RefSeq) ras-related protein Rab-39B-like
KO
K07925
Ras-related protein Rab-39B
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119215940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119215940
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ppug04031
]
119215940
Membrane trafficking [BR:
ppug04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
119215940
GTP-binding proteins [BR:
ppug04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
119215940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
AAA_22
TniB
Motif
Other DBs
NCBI-GeneID:
119215940
NCBI-ProteinID:
XP_037324401
LinkDB
All DBs
Position
16:complement(9570044..9572800)
Genome browser
AA seq
213 aa
AA seq
DB search
METIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEVEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHNWLEEAQSHVQPHNIVFLL
VGHKCDLEDQRQVSQQEAEKLAGAYGMRYVETSARESVNVEKAFVDLTRDIFELVRSGDI
KIQDGWEGVKSGFVPNIVHSSEEVTKGARQCFC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggagacgatatggctctatcagtttcgtctgattgtcatcggagactccacagttggc
aagtcttgtcttatccggaggttcaccgagggccgcttcgcccaggtgtcagaccccacg
gtgggggtggacttcttctctcgcctggtggaggtcgagccgggcaaaagaatcaaactg
cagatctgggacactgcggggcaggaaaggttcaggtccatcaccagagcttactaccgt
aactccgtgggggggctcctactcttcgacatcacaaaccgccgctccttccaaaacgtc
cacaactggctggaagaggcccagagccacgtgcagcctcacaacattgtcttcctgctg
gtcggtcacaagtgcgacctggaggaccagcgtcaggtgagccagcaggaggccgagaag
ctggccggggcctacgggatgcgctacgtggagacatcggcgcgggaatccgtcaacgta
gagaaggcgtttgtggatctgacgagggacatctttgagctggtgcggagcggcgatatt
aagatccaggacggctgggagggcgtcaagagcggatttgttcctaacatcgtccattcc
tccgaggaagtcaccaagggcgcccgccagtgcttctgttga
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integrated database retrieval system
