Pungitius pungitius (ninespine stickleback): 119216189
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Entry
119216189 CDS
T07626
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119216189 (rnf13)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119216189 (rnf13)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119216189 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
zf-RING_16
DUF7027
zf_RING_Vps8_fungal
zf-RING_4
PHDvar_NSD
RINGv
FeoB_associated
PHD
zf-RING-like
Hemotin
Neur_chan_memb
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
119216189
NCBI-ProteinID:
XP_037324589
LinkDB
All DBs
Position
7:complement(14089991..14115794)
Genome browser
AA seq
380 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQLFAFLNLLPVGADIAAYSFDNKTENFDDLPARFGYRLP
SDGLKGFLIGARPENACEPIEPPPRDNMTGAFIVLIRRYDCNFDIKVLHAQKAGYKAAIV
HNVVTNDLISMGSNDLDIMKQIDIPSVFVSEQTANSLKEDFAYDKGGHVVLMPDFSLPLE
YYLIPFLVIVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPIHKYKKGDNYDVCA
ICLDEYEEGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSEEGGSGP
DENEEVSESTPLLRSLASTSAHSFGTMSGASRSERDQESSDYDDDELDSSDSEEEVTVET
VVVQMQQPCCEGPEHDLPRA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtccctgggaatgctgatgctgtcggccacacagatctacaccatcttcact
gttcagctattcgccttcctcaacctgctgcccgtgggggccgacatcgctgcgtactcg
tttgacaacaaaacggagaactttgatgatctgcctgcgcggtttggctatcggctgccc
agcgatggactgaagggtttcctgatcggggcgcgaccagagaatgcgtgtgagcccatc
gagcccccacccagggacaacatgacgggcgccttcatcgtcctcatcaggcgctatgac
tgcaactttgacatcaaggtcctccatgctcagaaagccggatacaaggccgccattgtt
cacaatgtggtcaccaatgacttaatcagcatgggatccaatgatctggatattatgaag
cagatcgatattccctccgtgtttgtgagcgagcaaacggccaactctctgaaggaggac
tttgcgtatgacaaaggggggcatgtggtcctcatgccagacttcagcctgccgctggaa
tactacctgatccccttcctcgtcattgtgggaatctgcctcatcctcatcgttgttttc
atgatcaccaagtttgtccaggatcgtcacagggctcggaggagccgcctgcgtaaggat
cagctgaagaaacttcccatccacaagtacaagaaaggggacaactacgatgtgtgcgcc
atctgcctggacgaatacgaggaaggggacaaactgcgcgtcctgccgtgttctcacgcc
taccacagcaagtgcgtggacccctggctgaccaaaaccaagaagacgtgtccggtgtgc
aagcagaaggtggtcccctcgcagggcgactccgactccgaggaggggggcagcggcccg
gacgagaacgaggaggtgtcggagagcacgccgctcctgcgctccctggcgtccaccagt
gcccactccttcggcaccatgtcgggggcgtcgcgctcggagcgcgaccaggagtcctcc
gactacgacgacgacgagctggacagcagcgacagcgaggaggaggtcaccgtggagacc
gtggtggtgcagatgcagcagccctgctgcgagggcccagagcacgacctgccccgagct
tga
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integrated database retrieval system
