Pungitius pungitius (ninespine stickleback): 119216210
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Entry
119216210 CDS
T07626
Symbol
hnf1ba
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119216210 (hnf1ba)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119216210 (hnf1ba)
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Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Motif
Other DBs
NCBI-GeneID:
119216210
NCBI-ProteinID:
XP_037324675
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All DBs
Position
3:12288804..12303896
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AA seq
571 aa
AA seq
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MFLKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPPGFGVKLESLPMSPARPQS
GKMNGVDVDSKPVFHTLTNGHSKGKMSGDEGSEDGDDYDTPPILKELQSLNTEEAAEQRA
EVDRMLAEDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAAL
YTWYVRKQREILRQFNQAVQGSMGNMTDKGNQDPVFFFPEFNPSGQGMGQPGEEVGSEPS
CKKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAQGLG
SNLVTEVRVYNWFANRRKEEAFRQKLAMDAITVPPHGMNPLLSHNSPHHPQTSLSPPMRY
SQGPGEVTSSTTISHHGGNAMATSQSVLQQVSPGGLDHSHSLLSPDSKMISGSGGGLPPV
STLTNIHSSHHGHQQNLIMPLSGVMAIAQSLNTSQSQTVPVINSVAGSLAALQPVQFSQQ
LHSPHHQSLMQQSPGHMSQQPFMATVTHSHMYPHKQEPPQYSHQSRFPSAMVVTDGNSLS
TLSSMSSSKTDGPVNKMVQLGGLSWCPLQAW
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaaaatggtatccaagctgacatctctgcagcaggagctcctcagcgccctg
ctggactcaggagttaccaaggatgttctgatccaggccctggacgatatggaccccagt
ccgcctggctttggagtaaaactggagagcctgcccatgtcccccgcgcgtcctcagagc
ggcaagatgaacggagtggacgtcgattccaaacccgtcttccacacgctcaccaacggc
cacagcaagggcaagatgtccggggacgagggctccgaggacggggacgactacgacacc
ccgccgatactgaaggagctccagtcgctgaacacggaggaggccgccgagcagcgcgcg
gaggtggatcgcatgttggcagaggatccatggcgtgctgcccgcatgatcaaaggttac
atgcagcagcacaacatcccccaaagggaggtggtggacgtcacagggctgaaccagtct
cacctctcccagcacctcaacaaaggcacgcccatgaaaacacagaagcgagcggccctc
tacacctggtatgtccggaaacagcgggaaattctccgacagttcaaccaggccgtgcaa
ggttctatgggcaacatgacagacaaaggcaatcaggatccggtgttttttttccctgag
ttcaacccgtctggtcagggcatgggtcagccaggcgaagaggtaggcagtgaaccgtcc
tgcaagaaaatgagacgtaaccgcttcaaatgggggccggcctcccagcaaatcctgtac
caggcctacgaacgccagaagaaccccagcaaggaggagagggaagctttggtagaagag
tgcaacagagccgaatgtcttcagagaggcgtctccccctccaaagctcagggcctcggc
tccaatctggtcactgaagtgcgagtctataactggttcgccaacaggcgtaaggaggaa
gccttcaggcagaagttggccatggacgccatcaccgtgccgccccacggcatgaacccc
ctgctgtcccacaactcgccgcatcatccccagaccagcctttcacctcccatgcggtac
agccaaggccccggtgaggtcacctcctccacgaccatcagccaccacggtggcaacgcc
atggcgaccagccagtcggtgctccagcaggtgtctccgggtggactggaccacagccac
agtctgctgtcacctgactccaagatgatttcaggttcgggtggaggtcttcctccagtc
agcacactgaccaacatccacagttctcatcacggccaccagcagaacctcatcatgcct
ctctccggggtcatggccatagcacagagtttaaacacgtcccaatcccagacggtgcca
gtgatcaacagtgtggcgggcagcttggcggcgctgcagccggtgcagttttcccagcag
ctccacagcccccaccatcagagcctgatgcagcagtcccccggccacatgagtcagcag
ccgttcatggctaccgtcacacactcgcacatgtatcctcacaagcaggagccgccgcaa
tattcccaccagtcacgtttcccctctgccatggtcgtcacagacggcaacagcctcagc
accctcagctccatgtcctcgagcaagacggacggtcccgtaaacaagatggtacaactc
gggggtctctcctggtgtcctcttcaagcttggtga
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