Pungitius pungitius (ninespine stickleback): 119216246
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Entry
119216246 CDS
T07626
Symbol
ap3d1
Name
(RefSeq) AP-3 complex subunit delta-1 isoform X2
KO
K12396
AP-3 complex subunit delta
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119216246 (ap3d1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119216246 (ap3d1)
Membrane trafficking [BR:
ppug04131
]
Endosome - Lysosome transport
Others
AP-3 complex
119216246 (ap3d1)
Endosome - Golgi transport
119216246 (ap3d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3D1
Cnd1
HEAT
HEAT_2
INTS1_R4
PDS5
RTP1_C1
RasGEF_N_2
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
119216246
NCBI-ProteinID:
XP_037324786
LinkDB
All DBs
Position
7:17425377..17446890
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AA seq
1263 aa
AA seq
DB search
MALKIVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISTCIDEIKQELKQDNIAVKANAVC
KLTYLQMLGYDVSWAAFNIVEVMSSSKFTYKRIGYLAASQCFHESTDVIMLTTNQIRKDL
SSPNQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPES
LRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIK
IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSAS
IQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRA
LDLLYGMVSKKNLMEIVKKLMLHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYIS
ILVELTRLEGTRHGHLIASQMLDVAIRVKAIRVFAVAQMATLLDNAHLMTGNVQRKGICE
VLYAAAWICGEFSEHLENPTQTLEAMLRPKVATLPGHIQAVYVQNAAKLFATVLKSQEGN
TDSTAAQETSQLMIERLPLFVQSANLEVQERASCILQLVKYIQKLQQKDVEVAEEVIALF
AGELNPVAPKAQKKVPVPEGLDLDAWINEPPSESESEDDQPKAIFAKEETKHSRTRHTEV
DEKELAKRREVRKQEQANNPFYIKASPSSQKVYQEAPGVEHIPVVQIDLSVPLKVPGLPM
SDQYVKLEEERRQKERVEKKKKDKKKRKEKGGGRRKKRDSGPESEEDITPAHMVDIVTEE
MPENALPSDDDDKDPNDPHKALDIDLDNLMEMAARRPLADSEMLPVRSHRAAEALKSPVE
DGDAEAAASQEPKKKSSKEKREKKKDKEKDRKKSKDDKKKKKHRREEKEEDLLGGQADGP
VAQSKETSEAAAPPAANTAEVSDLDFWLSNAPVPPNAQEAATSAEAAPVPETASGTAPDS
EPDEPKDTEPEETEKKSSKHKKKKQKKEKEDKEKKKKKKHHHHHHHSDGGGEESVQNGTM
EEEEPLPPMSNYCLLAESSYIKMENDIQGNLQDGSQVVVSIIFENKCDSFLKSMEFNVLD
SLNAKLQRPEGSGPHDGLTVPFQLPPGVSNEARFVFAVQSIVMPQKLKGTLTFIVKNEDS
STHEKLDFKLHFTCSSYLITTPCYSDAFAKLLESGDLKCSSVRLEGVSQPFHHLLARICF
HHHFSVVERVDSCASMYSRSIQGHHVCLLVKTSGQTVSIDAKCDEPTLLGNVLDEIKQTF
SQC
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaagattgtcaaagggagcatcgatcggatgttcgataaaaatctgcaggat
ttagtacgtggcattcggaatcacaaggaagatgaggccaaatacatctccacatgcatc
gatgagatcaaacaggagctcaagcaggacaacatcgccgtcaaggccaacgctgtgtgc
aagctcacctaccttcagatgctgggctatgatgtcagctgggccgctttcaacattgtt
gaagtcatgagctcctccaagttcacatacaagaggataggctacctggcggcctcgcag
tgctttcacgagagcactgatgtcatcatgctgacaaccaatcagatccgaaaggatctc
agcagtcccaaccagtatgacacaggtgttgctctcaccggcctctcttgttttgtgacc
cctgacctggctcgggacttggccaatgacatcatgacactgatgtcccacactaagccc
tacatcagaaagaaagcggtgctgatcatgtacaaggtgtttctgaagtacccggagtcc
ctgcgccctgctttccccaggctcaaggagaagctggaggacccagacccaggtgtccag
tctgcggcggttaacgtcatatgtgagctggctcggagaaatcccaagaactacttgtct
ctggcaccactcttcttcaaactcatgacttcttccaccaacaactgggttctcattaag
atcatcaagctgtttggtgcgctcacacctctggagccgcgcttggggaagaagctgatc
gaacctctgactaacttgatccacagtacctctgccatgtctctgctctacgaatgtgtc
aacactgtgattgcagtgttgatttccctgtcctctgggatgcctaaccacagtgctagt
atccagctctgtgtgcagaaactgcgaatcctgatcgaggactcggaccagaacttgaag
tacctgggcctgctggccatgtcaaagatcctgaagacccaccccaagtcggtgcagtct
cacaaagacctcatcctgcagtgtctggatgacaaggacgagtccatccgcctgagagct
ctggacctgctctatggcatggtttcgaaaaagaacttaatggagattgtaaagaagctg
atgctccacgtggacaaagctgaaggaaccacctacagagatgagctgctcacaaagatc
atagacatctgcagccagagcaactaccagtacatcaccaactttgaatggtacatcagc
atcctggtggagctgacccggttagagggcacacggcacggccacctcatcgcctctcag
atgctggacgtggccattcgggtcaaagccatccgggtctttgctgttgcccagatggcc
actctgctggacaacgcccacctgatgacgggcaacgtgcagcggaagggcatctgtgag
gtgttgtatgcggccgcctggatctgcggggaattctctgaacacctggagaacccgaca
cagacgctagaggccatgctgcggccaaaggtggccaccctaccgggccacatccaggcg
gtgtatgtgcagaacgcagccaagctgtttgccaccgtgcttaagagccaggaggggaac
acggacagcacagcagcacaggaaaccagccagctgatgatagaaaggctgccgctgttt
gtccagagcgccaacctggaggtgcaggagagggcgtcctgcatcctgcagctggtcaag
tacatccagaaactgcaacagaaggacgtagaggtagcggaggaagtcatcgctctgttt
gctggagaactcaaccctgtggccccaaaagcacagaaaaaagtgcctgttcccgaaggt
ctggacttggatgcctggatcaacgagccgccatctgagagcgagtcagaggacgatcag
cccaaggctatttttgccaaggaggagaccaaacactcccgcacccgtcacactgaggtg
gacgagaaggagctggcaaagaggagagaagtcaggaagcaggagcaagccaacaacccg
ttctacataaaggcctccccgtcctctcagaaggtgtaccaggaggctccaggagtggag
cacatcccggtcgtgcagattgacctcagtgtgcctctcaaagtcccaggtctccccatg
tctgaccagtatgtgaaactggaggaggagcgtcgccagaaagagagggtggagaagaag
aagaaggacaagaagaagaggaaagaaaagggcggcggacgacggaagaaacgcgattcg
ggccccgagagcgaggaggacatcacgcccgcgcacatggtcgacatcgttaccgaggag
atgccggagaatgccttacccagtgatgatgatgacaaagatcccaatgaccctcacaaa
gccctggacatcgacctggacaacttgatggagatggccgcacgcaggccgcttgccgac
agcgagatgctgccggtcaggtcacatcgtgcggccgaggctctcaaaagcccggtggaa
gatggcgacgccgaggccgccgcttcacaggagcccaagaagaagagcagcaaagaaaag
cgagagaagaagaaggataaagagaaggacaggaagaagagcaaagacgacaagaagaag
aagaaacacagacgtgaggaaaaggaggaggatcttctcgggggtcaggcagacgggcct
gttgcccaatcaaaagaaaccagcgaggcggctgcaccccccgccgccaacaccgctgag
gtttcggacctggatttctggctctcaaacgctccagtgccccctaacgcccaggaagca
gccacctcggcagaagcagcccccgtccccgagacggcctccggcacggcgccggactcc
gagcccgacgaacccaaagacaccgagccggaggagactgaaaagaagtcctccaaacac
aagaagaagaagcagaaaaaggagaaggaggataaggagaagaaaaagaagaagaagcat
catcaccatcatcaccacagtgacggtggtggggaggagtcggtgcagaacggcaccatg
gaggaggaagagcctctgccgcccatgtccaattactgcctgctggctgagagctcctac
atcaagatggaaaatgacatccagggaaacctgcaggatggcagtcaggtggtggtgtct
attatatttgaaaacaagtgtgacagcttcctcaaatccatggagttcaacgtcctggac
tctctcaacgccaagctgcagaggcctgaggggtcgggtccacatgacggcctcaccgtc
cccttccaacttccacctggggtgtccaatgaggcgcgatttgtcttcgctgtgcagagc
atcgtaatgccccagaaactgaagggaaccctcaccttcatagtgaagaatgaggactcc
tccactcacgagaaactggacttcaaactgcactttacctgctcgtcctacctaatcact
actccttgctacagcgacgcctttgcaaagctgctcgagtcgggggacctgaagtgcagc
tctgtcagactggagggagtcagccagccgttccaccacctactggccaggatctgcttc
caccatcatttttctgttgtggagagggtggactcttgtgcctccatgtacagccggtcc
atccagggtcaccacgtctgtctgctggtcaaaacttctggtcagacggtgtccatcgac
gctaaatgtgatgagccgacgctgcttgggaatgtgctggatgagatcaagcagaccttc
tctcagtgctga
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integrated database retrieval system
