Pungitius pungitius (ninespine stickleback): 119216258
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Entry
119216258 CDS
T07626
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119216258 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119216258 (rad54l)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
119216258 (rad54l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Zn_ribbon_InsA
Motif
Other DBs
NCBI-GeneID:
119216258
NCBI-ProteinID:
XP_037324806
LinkDB
All DBs
Position
7:complement(8549348..8556158)
Genome browser
AA seq
741 aa
AA seq
DB search
MRRSLAPSQVAKRKQPGDSCEDEDWTCDTEKKRRCDNEIRESHISPFRKPLSQLNKLQPP
CVDGDKHEAFIRSILSKPFKIPIPNYTGSLGIRALGLKRAGVRKALHDPFAEDALVLYEP
PSLSAHDLIQAEKEKLPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRISGSYGCIMAD
EMGLGKTLQCIALIWTLLRQSPDAKPEIDKVIVVSPSSLVRNWYNEVGKWLGGRVSPVAI
DGGSKDEIDRQLVNFISQHGLRIPTPILIISYETFRLHAGVLHKGKVGMVICDEGHRLKN
SDNQTYQALNAMSAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILK
GRDADASDKDRETGEGKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQLEL
YKHFLRKAKPIEALQEGKINVSSLSSITSLKKLCNHPALIYEKCVENSEGFEGALDLFPP
GYCTKAVEPQLSGKMLVLDYILAMTRTTSSDKVVLVSNYTQTLDLFEKLCRSRRYLYVRL
DGTMSIKKRAKIVERFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQA
MARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELRE
LFTLNEETASDTHDRFRCRRCVNGREVRPPDDDSDCTSNLSQWNHCFDKKGLRDQVLKAS
WDAAVSFVFHQRSHEDRKGVV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggagtcttgcacccagccaggtggccaaacggaagcaaccaggagattcgtgt
gaagatgaagactggacatgtgacactgagaaaaaaagaagatgtgataatgagatcaga
gaaagtcatatttcgcccttcagaaagcctttgagtcagctcaacaagctgcagccgcca
tgtgtggatggtgacaaacatgaggcatttattcgcagtatcctctccaagccatttaaa
atccccattcctaattacacaggctcactgggaatcagggctctcggtctgaagcgtgca
ggtgtgaggaaagccctccacgatccctttgcagaagatgctttggtcctctacgagccc
ccgtctctgagcgctcatgacctgatccaagctgaaaaagaaaaactaccggtccatgtt
gttgtggatccagttttaggaaaggttctcagaccccatcaaagagagggggtgaagttc
ctgtgggagtgtgtgacgggaagacgcatctcgggctcgtacggatgcatcatggccgac
gagatgggcctggggaagaccttgcagtgcatcgccctcatctggacactgctgcgccaa
agtccggatgctaagccggagatagacaaggtcattgtggtttccccttccagtctggtt
cgcaactggtacaatgaagtaggaaagtggctgggaggacgcgtctcaccggtggccata
gacggaggttcaaaggatgaaatcgatagacaattagtgaacttcatctctcagcatggt
ttgaggataccaaccccgatcctgatcatctcatacgagacatttcggctgcacgccggg
gttctgcacaagggcaaagtcggaatggtcatctgcgatgagggtcatcggctgaagaac
tctgacaaccagacataccaggctctaaatgccatgagtgcccagaggagagtgctgata
tccggcactcccatccagaacgacctgctggagtacttcagcctggtccactttgtgaat
gctgggatcctcggtacagcccaggagtttaaaaagcgatttgagcttcccatcctcaaa
gggcgagatgcagatgctagtgataaagacagagagacgggagaggggaaacttaaggag
ctgatcagcatcgtcaataggtgcttgattagaagaacatccgatatcttgtccaagtat
cttcctgtgaaaatcgagcaggtcgtatgttgcaggctgactcctctgcagttggagctc
tataaacacttcctacggaaggccaaacccattgaggcgttacaagaaggcaaaataaat
gtctcctccctgtcttccatcacatcactcaagaaactgtgcaatcacccggctctcatc
tacgagaagtgcgtggagaactccgagggctttgagggggccctggatctgtttccacct
ggttactgcaccaaggctgtggaacctcagctgtctgggaaaatgcttgtccttgactac
attctggcaatgacgaggactacatcgagtgacaaggtggtgttggtctccaactacact
caaacactggacctctttgaaaagctgtgcagatctagaagatacctctatgttcgtctg
gatggcacaatgtccatcaagaaaagggccaagattgtagaacgattcaacagtccatct
aatccagagttcatattcatgctgagcagcaaggctggcggatgtggcctgaatctgatt
ggtgctaatcgcctggtcatgtttgatccagactggaacccagccaatgacgaacaggcg
atggcacgcgtgtggagagacggccagaagaagacctgctacatctacagactgctctct
accgggacaatcgaggagaagatcctccagaggcaggcccacaagaaagccctgagcagc
tgcgtggtggacgaggagcaggacgtggagcgtcacttctctctgggcgaactgcgagaa
cttttcaccctcaacgaggagaccgccagcgacacgcatgaccggttccgttgtcgccgc
tgtgtgaatggcagagaggtccggcctccggacgacgactccgactgcaccagcaacctc
tcccagtggaaccactgcttcgacaaaaagggtctgagggaccaagtgttgaaagcctcc
tgggacgcggctgtgtccttcgtcttccaccagcgctctcacgaggaccggaagggtgta
gtatag
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