Pungitius pungitius (ninespine stickleback): 119216266
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Entry
119216266 CDS
T07626
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppug03009
]
119216266 (ddx49)
Enzymes [BR:
ppug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119216266 (ddx49)
Ribosome biogenesis [BR:
ppug03009
]
Eukaryotic type
90S particles
Helicases
119216266 (ddx49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119216266
NCBI-ProteinID:
XP_037324827
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All DBs
Position
7:11834330..11839515
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AA seq
472 aa
AA seq
DB search
MADFASLGLSDWLVKQCKQLGINKPTPVQENCMPAILEGRDCMGCAKTGSGKTAAFVLPV
VQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLRDCIVVGGMDMVGQALELSNQ
PHVVVATPGRLADHIRSSNTVRMNKIQFLILDEADRLLEQGCADFTKDLETILNSLPAKR
QTLLFSATLTDTLHELKNIAMNKPFLWESTSETRTVDELDQRYILTPEKVKDAYLVHLIQ
KFTDEHDDWSIMIFTKTCKDCQVLTMMLREFQFHAISLHSMMKQKQRFANLAKFKASVFK
ILVATDVASRGLDIPTVQVVINHNTPGLPKTYIHRVGRTARAGRNGVSITLVTQYDINLV
HSIEGHTQMKLKEYPVVEKEVLKILTQVNVTRRQCEIKLESTDFDEKKEINKRKQLILEG
KDPDLEARRKVELEKIRGQKKRFKQKIQESIQRQKHGQKKNKLTKKAADKTA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcggactttgcgtcgctaggtctctcggactggctggtgaaacagtgtaaacagctg
ggaatcaacaaacccaccccagtccaggaaaactgcatgcctgctatactagaaggtcgg
gactgtatgggctgtgctaagaccggaagtgggaagactgcagcctttgtgcttccagtg
gtgcagaaactgtcggaggacccatatggcatcttctgcttggtgctcactcctaccagg
gagcttgcctatcagattgcagagcagtttcgagtgttggggaagccgctgggtttgaga
gactgcatcgtggttggtggaatggacatggtgggtcaggccctggagctgtccaaccaa
ccgcacgtagtcgtggcgacgcccgggcggctggctgatcacatccgcagttccaacacc
gtccgcatgaacaagatccagtttctgatattggatgaggcggaccgtctgttggaacag
ggttgtgctgacttcaccaaagacctggagacaattctgaattctttaccggctaaacgg
cagacgctcctgttcagcgccacgctcactgacaccctgcacgagctgaagaacattgcc
atgaacaaaccattcttatgggagagcacgtcagagacacggacagtggacgagctggac
cagaggtacatcctcacaccggagaaggtgaaggacgcctacctggtccacctgatccag
aagtttactgacgagcatgatgactggtccatcatgatcttcaccaagacatgcaaggac
tgccaagtcctcaccatgatgctacgggagtttcagtttcatgccatctccctgcactcc
atgatgaaacagaaacaacgatttgccaacctcgccaagttcaaagccagtgtcttcaaa
atcctggtcgcgactgacgtggcttccagaggtttggatattccaactgtccaggtggtc
atcaaccacaacaccccaggactccccaagacctacatccacagagtcggacgaacagca
agagccgggaggaatggcgtgtccatcacactggtgacgcagtacgacatcaacttggtc
cactccatcgaaggacacactcagatgaagctgaaggaatatcctgtggtggagaaagaa
gtcttgaagatcctcacccaggtcaacgtgacccgacggcagtgtgaaataaaacttgag
tcaacggattttgatgagaaaaaggaaatcaacaagaggaaacagctgatcttggagggg
aaggatccagacctggaggcaagaaggaaggttgagctggagaagatccggggccagaag
aagaggtttaaacagaaaatccaggagagcattcagagacaaaaacatggacagaagaaa
aataaactaacgaagaaggcagcagacaaaactgcctga
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