Pungitius pungitius (ninespine stickleback): 119216279
Help
Entry
119216279 CDS
T07626
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04010
MAPK signaling pathway
ppug04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119216279
04020 Calcium signaling pathway
119216279
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119216279
Ion channels [BR:
ppug04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119216279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
119216279
NCBI-ProteinID:
XP_062419221
LinkDB
All DBs
Position
7:16628431..16706207
Genome browser
AA seq
2534 aa
AA seq
DB search
MLELGSCSVSSQSLTGDHNASGLQRAPSGPEGSGGGLCKGAMSGSSTPRHHALRSSPMDS
EDWREHRPGPAGGSGLLSESRAFQEPRSLSASHDALYLPHVSGHAPPPHPSRLGLCLDVA
STFEVGAGLLGADGDLAVSPNVMKRRRGGLIEQKDIVKAHQAHKIHSTPQARRKEWEMAR
FGDDVPGLLSSGDGGSERNRNRDGAAVSTGGISPAFKQTKAQRARTMALYNPIPVRENCF
TVNRSLFIFGEDNVVRKYAKKVIEWPPFEYLILTTIIANCIVLALEQHLPGEDKTPMSKR
LEKTEPYFIGMFCLEAGIKIIALGFVFHKGSYLRNGWNVMDFIVVLSGILAAAGAHLNIS
VDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFY
SGRLHYTCMPQPGILENETVDSSEYEVPCGDRQCPTKYTCNDTWIGPNDGITQFDNILFA
VLTVFQCITMEGWTTVLYNTDDALGPRYNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKER
ERVENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENTNAGTSALDALRSLPEWST
GGAYVLKRATTIKRRGMDAVHRGQPGEEPYGDFSSVGVPRARSAKRGPTAFFRRKERLLR
ISIRRVVKTHTFYWTVLGLVALNTLCVAIVHHNQPLWLSTFLYYAEFLFLALFLTEMFLK
MYSLGPRLYFHSSFNCFDCSVIVGSIFEVLWGFFRPGTSFGISVLRALRLLRIFKITKYW
ASLRNLVVSLMNSMKSIISLIFLLFLFILVFALLGMQLFGGRFIFEDYTPTNFDTFPAAI
MTVFQILTGEDWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLA
NAQELTKDEEEAEAAFNQKHALQKAKEVGPLSSFMSSEGSRRRRPYLYRKRAIHRSRPTY
SGSLREAQGSVREGRPPPPLNPCNSFMSRRERRQRMTMSVWEQRTSQLRRHRQMSSREVL
FTGPGEEKDGPPLSAQTPHGNPPPPPPPQRKAGSLKQLTDPPGSPSQHRASGPSVLVDAP
LEADRSADEPQRQAERAPGSPGAPDAPLADVSIPAAVPGPPGSEPPSESGALLGQGPGDD
NADAGGGVRPSPRLNCERQHRAVKKFRPPDNFDALAPGTGGRGGIRGRRAPHRCDRQNGT
RGQGSSPGNGSRSVSRERRRTPGEMEEKEAKAEGEEERSKPDESGPSDVSERGPGNQERA
ADQGPQTQGDGPQPSDPSPPVVPDATKDQNETDRDQDKPQLGSSVVIDVPNAQSSLELST
ITVISKDSETCKSEGEEADDTKPANNVTPDSMFLFKPDNLVRRACHYVVNLRYFEMSILL
VIAASSIALAAEDPVATSSDWNKVLRYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFRDL
WNILDFIVVVGALVAFALSSNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTS
LKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKDCQGYYIDYEKDKKEVKR
RDWKRHEFHYDNVIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSHGNRMEMSIFYVI
YFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAIGAKPLTRYMPQNRH
TFQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKYYSAPPAYEAVLKHLNTAFTVLFSVEC
VLKIMAFGFLNYFRDTWNIFDFITVLGSITEIVVDLQFVDTFNMSFLKLFRAARLIKLLR
QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNEETHITQHNNFKT
FSGALMLLFRSATGESWQEIMLSCLGGQKCERDPAVFQTSDQEGGCGSDFAYFYFVSFIF
FSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAACGRIHYTDMYEML
TNMSPPLGLGKKCPSKLAYKRLVLMNMPVDDDMSVHFTSTLMALIRTALEIKIARGGEDR
NHMDLDLQKEIGVIWPHLSQKTLDLLVPIHKASDMTIGKIYAAMMIMDYYKQSKAKKLRQ
QLEEQKHAPMFQRMDASSLPQEILCNAKSLSFLRHSAGSALGGFGALSPISPQEMFLQPL
SRSMEEKDEEDDDDYRSPYLQYHHLHPRHHLHTLVPEVAEYNQVMQQARRDAAVIKFPQR
TASIRASSMPRLAVDPPLGMCADSKPMQRSFSTIGDQCVNGLWQEQHSLERISPDGTYRP
RQRSYRGPRINHKETSSHERGRSKERRHLLSPDVSRCNSEERSRDPSREGRTSRSPSEGR
NHTLQRQTLVNTSGSPAHSAPESGTPRNRRQLPQTPSRPRPYISYAPLVCQAHVSAAPAA
PSEDRTQPQDGPGGSRATAWRAGTDGGPPAAAAPGSSEGQAPGPSHPSPHRYISEPYLAF
RGDAGGGVAPDGQDTLTFETAVATSLGRANAISSAPQLRHSWQLPNGLYRKNLGQAGPAG
AGELPSDTDEDDRC
NT seq
7605 nt
NT seq
+upstream
nt +downstream
nt
atgctggaactgggctcctgttcggtcagctctcagtctctgacgggggaccacaatgcc
tcggggctacagagagctccgtcggggccggagggctcaggaggcggtttgtgcaagggg
gcgatgtccggaagcagcaccccgaggcaccacgccctccgctcgtccccaatggacagc
gaggactggcgggagcaccgcccgggacctgccggtgggtccggcctgttgtccgagtcc
cgcgccttccaggagccccgaagtctctccgccagccacgacgccctctacctcccgcac
gtgtccggccacgccccgcctccgcatccgagccggctcggcctctgcctggacgtggcc
tctacgtttgaggtcggagccggactgttaggggcggatggagatttggcggtcagcccc
aacgtgatgaagaggcgtcggggcggcctgatcgagcagaaggacatcgtcaaagcccac
caggcccataagattcacagcacgccacaggctcgacgcaaggagtgggaaatggcccgg
ttcggagacgacgtgccgggcttgttgagctcaggtgatggagggtccgagcgcaaccgc
aaccgcgatggggcggccgtgtccacaggtggcatctcccccgccttcaagcagaccaaa
gcgcagcgtgcccgcaccatggccttgtacaaccccatcccggtcagggagaactgcttc
accgtcaacaggtccctcttcatcttcggcgaggacaacgtggtcaggaagtacgccaag
aaagtcattgagtggcctccgtttgagtacctgatcctcacaaccatcatcgccaactgt
atcgtcttggctctggagcagcatcttcccggagaggacaagaccccgatgtcaaagagg
ctggagaagacggagccctacttcatcgggatgttctgcctggaggctgggatcaagatc
atcgccctgggcttcgtgttccataaaggctcctacctcaggaacggatggaacgtcatg
gacttcatcgtggtcctcagtgggatcctggctgcagcgggcgcacacctgaacatctca
gtggacctgaggactctgagggccgtgcgagtgctgcgtcccctcaaactggtgtcaggc
atcccgagtctgcagatagtcctgaagtccataatgaaggccatggttcctctgctgcag
atcggcctgctgctcttttttgcaatcctcatgttcgccatcatcggcctggaattttac
agcggcagactgcactacacctgcatgccgcagcctgggatcctggaaaacgaaacggtg
gactcctctgagtacgaggtgccgtgtggcgaccgccagtgtccgaccaaatacacctgc
aacgacacgtggatcggcccgaatgacggcatcactcagtttgacaacatcctgtttgct
gttctcaccgtttttcaatgcatcaccatggagggatggaccactgtcctctacaatact
gacgatgccttgggccccagatacaactggctctacttcatccctctcatcatcatcggc
tctttctttgtcctgaatcttgtgctgggagtcctctctggggaatttgcaaaggagagg
gagagggtggaaaatcgcagggctttcatgaaactgaggcgccaacagcagatcgagaga
gagctcaacggctaccgggcctggatcgacagagcagaggaagtgatgctcgccgaggag
aacacgaatgcggggacttccgccctcgatgctctcaggagcctcccagagtggagtaca
ggtggcgcctacgtgttgaagagagccaccaccatcaagaggcgagggatggatgcggtg
catcgagggcaaccgggcgaggagccatatggcgacttctcctcagtgggggtccccaga
gcgcggagcgccaagcgagggccgacggcgtttttccgccgcaaggagcgtctcctccgc
atctccatccgccgcgtggtgaagacgcacactttctactggacagtgctgggcctggtg
gctctcaacacgctgtgcgtggccattgttcaccacaaccagcctctctggctgtccacc
ttcctctactatgcagagttcctgttcctcgctctgttcctgactgagatgttcctgaag
atgtacagcttgggacctcgtctgtacttccattcctcctttaactgctttgactgcagc
gtgattgtcggcagcatctttgaagtgctttggggtttcttcaggcccggcacttccttc
ggcatcagtgtcctgcgtgcactccgtctgctaaggatcttcaagatcaccaagtattgg
gcgtctctgagaaacttggtggtgtctctgatgaactccatgaagtccatcatctccctc
atcttcctcctcttcctgttcatccttgtttttgcgctcctcggcatgcagctctttggt
ggcaggttcatctttgaggactacaccccaactaactttgacacctttcctgcagccatc
atgaccgtctttcagatcctgaccggagaggactggaacgaggtgatgtacaatggtatt
cgctctcaaggaggagtgaagtctggcatgtggtcctctatctacttcatagtgctcacg
ctgtttggcaactacacactgctgaatgtcttcttggccatcgctgtggacaacctcgcc
aatgcacaagaacttaccaaggatgaagaggaagcagaggcagcgttcaaccaaaagcac
gctctccagaaggcgaaggaggtcgggccgttgtcctccttcatgtcttcagagggaagc
cggaggaggcggccctacctgtacagaaagagagccatccaccgcagccggcccacctac
tccggctccctgagggaggcccagggcagcgtcagggagggccgcccacccccaccgctc
aacccctgtaactctttcatgtccaggagagagagaagacaaaggatgaccatgtctgtg
tgggagcagaggaccagtcagctgcggaggcaccgccagatgtccagccgcgaggttctg
ttcactggccccggcgaggagaaggacgggccgcctctctcggcccagacgccacatggg
aatcccccgccgccgccgccgccgcaacgcaaggccgggagtctgaagcaactgacagac
cccccgggctctccgtcccagcaccgggcctcgggcccctccgtgctggtggatgctccc
ctggaggccgaccgctccgccgacgagccccaacgccaggcggaacgggccccggggtca
ccgggtgcgcccgacgcgcccctggccgacgtttctatccctgcggccgtgccaggtcct
ccggggtccgagccccccagcgagagcggagcgctgctcggccagggtcccggcgacgac
aacgcggacgccggcggcggcgtgcgtccgagccccaggctgaactgcgagcgccagcac
cgggcggtgaagaagttcaggccgccggacaactttgacgcgctggctcccgggacgggc
ggtcgcggtgggattcgggggaggagggcgccgcatcgctgcgaccgtcagaacgggacc
cgcggtcaggggtcctcgccggggaacgggagccgctcggtcagcagagagaggaggagg
acaccgggggaaatggaggagaaggaggccaaggctgaaggggaggaagagcggtccaag
cctgacgagagcgggccgagtgacgtgagcgagagaggcccgggcaaccaggagcgcgcc
gccgaccagggccctcagacgcagggagatggtcctcagccgtcagacccgtctcctccc
gtcgtcccagacgccaccaaagaccagaatgagacggaccgggaccaagacaaacctcag
ctcggctccagtgtggtcatcgacgtgcccaacgctcagtcatctctggagctctctacg
attacagtcatcagtaaggactcagaaacctgtaaatcggagggcgaggaggcggatgac
acaaagcctgctaacaacgtgactccagacagcatgttcctcttcaaacctgacaacctg
gtgcgtcgagcgtgtcactacgtggtgaacctcaggtactttgaaatgtccatcctgctg
gtcatagcggctagtagtatagcactggctgctgaggaccctgtagccacctcctctgac
tggaacaaggttctgcggtattttgattacgtgttcaccggagtcttcacgtttgaaatg
attataaagatgatcgaccagggtctgatcctccatgacggctcctacttcagagacctg
tggaacatcctggacttcatcgtggtggtgggagccttggtggccttcgccctctcaagc
aacaaagggcgggacattaagaccatcaaatctctgagagtgttgcgtgtcctcagacca
ctgaaaaccatcaagagacttcctaaactcaaggcggtgttcgactgtgtggtgacgtcc
ctgaaaaacgtcttcaacatcctcatcgtctacaagctgtttatgttcatttttgccgtc
atcgctgtgcagctcttcaaagggaagtttttctactgcaccgacagttcgaaggacacg
gagaaggactgccaaggttactacatagactacgagaaggacaagaaagaggtgaagaga
agagactggaagagacacgagtttcactacgacaacgtcatctgggctctcctcactctc
ttcaccgtttccaccggagagggatggcctcaggttctgcagcactcggtggacgtgacg
gaggaggacagaggtccgagccacggcaacaggatggagatgtccatcttctacgtcatc
tactttgtcgtctttcctttcttcttcgtcaacatctttgtggccctcatcatcatcacc
ttccaggaacagggcgataagatgatggaggagtgcagcctggaaaaaaacgagagggcg
tgtatagactttgccatcggtgccaagcccctgacccgctacatgccccagaaccggcac
acgttccagtaccgtctgtggcactttgtggtgtcgccctcttttgagtacaccgttctg
gccatgatcgccctcaacaccatcgtgctgatgatgaagtactactctgccccgccggcg
tacgaggccgtactcaagcacctgaacacggctttcaccgttctcttctccgtcgagtgc
gtcctcaagatcatggccttcggctttctgaactactttcgggacacgtggaacattttc
gacttcatcaccgtgttgggcagcatcacagagattgtggttgacttgcagtttgtcgat
acgttcaacatgagtttcctgaagctgttcagagcagcgcgcctgatcaagctgctccga
caaggttacaccatccgcattcttctgtggaccttcgtccagtccttcaaggcgttgccc
tacgtctgcctgctcatcgccatgctcttcttcatctacgccatcatcggcatgcaggtg
tttgggaacatcaagctgaacgaggagactcacatcacgcagcacaacaacttcaagacc
ttctctggtgctctgatgctgctgttcaggagcgccacgggggagtcgtggcaggagatc
atgttgtcttgtctcgggggacaaaagtgcgagagggaccccgctgtttttcagacgtcg
gaccaagaggggggatgtggctccgattttgcttatttctactttgtctcgttcatcttc
ttcagttccttcctgatgctgaacctgtttgtggccgtgatcatggataactttgagtac
ctgacgagagactcgtccatcttgggtcctcaccacctggacgagttcgtccggatctgg
ggggagtatgaccgcgccgcctgtggtcgtatccattacactgacatgtatgagatgttg
accaacatgtcgccacctctaggcctgggcaagaaatgcccctccaagttggcgtataag
agactagtcctgatgaacatgcccgtggacgatgacatgtccgtccacttcacctccacc
ctcatggccctcatccgcaccgccctggagatcaagatcgccagaggaggggaggataga
aatcatatggacctggacctgcagaaggagatcggcgtcatctggcctcatctctctcag
aagacgttggatctgctggttcccattcacaaagccagtgacatgaccatcgggaagatc
tatgccgccatgatgatcatggactactacaagcagagcaaagccaagaagctccgacag
caactggaggaacagaaacacgctcctatgttccagcgtatggatgcctcctcgctgcct
caagaaatcctatgcaatgccaaatccctttcattcctcaggcacagcgccggatctgct
ctaggaggttttggggcactcagcccaatctccccgcaagagatgttcctgcagccgctg
tcccgctccatggaggagaaggacgaagaggacgacgacgactatcgctcaccttacctc
caataccaccacctgcatccccgccatcatttacacacgctggtaccagaagttgcagag
tataaccaagttatgcagcaggccaggcgggacgcagcagtcattaaattccctcagcgg
acggcgtctatcagagcgtcctccatgcccaggctggctgttgatccaccgcttgggatg
tgcgcagacagtaagccgatgcagcgttccttctctaccattggagaccagtgtgtgaac
ggcctctggcaagagcaacactctctggagagaatcagtcctgacggcacatacaggcct
cgccaaaggagctacagaggtcctcgaataaaccacaaagaaaccagcagtcatgaaaga
gggcggtctaaagaacggcgccacctgctgtctcctgatgtgtcccgctgcaactccgag
gagcgcagccgcgacccgtcacgcgaaggcaggacgtcccgctcaccgagcgaggggcgc
aaccacaccctgcagaggcagacattggtgaacacatccggcagcccggcccattcggcc
ccggagtccggtactccccgtaaccgccgccagctgcctcagacgccgtcccgcccgcgg
ccttacatctcctacgcccccctggtctgccaagctcacgtctccgccgcgcccgccgcc
ccctccgaggaccggacccagccccaggacggccccggcggctccagggcgaccgcgtgg
agggccggcacggatggcggccccccggcggcggcggccccggggtcatccgagggtcag
gctccagggccgagccacccgtcccctcaccgctacatctccgagccctacctagcgttc
cgcggggacgccggcggcggagtggcgcccgacgggcaggacaccctcacttttgagacc
gccgtggcgaccagcctggggcgggccaacgccataagctccgccccccagctcaggcac
tcctggcagctccccaacggcctctaccggaagaacctgggccaggcgggtccagcggga
gccggcgagctgccaagtgacacggatgaggacgaccgctgctga
DBGET
integrated database retrieval system
