Pungitius pungitius (ninespine stickleback): 119216318
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Entry
119216318 CDS
T07626
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119216318 (lingo3a)
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
119216318 (lingo3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_9
LRR_EndoS
LRR_6
LRR_RPS2
LRRNT
V-set
Cupin_1
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
119216318
NCBI-ProteinID:
XP_037324926
LinkDB
All DBs
Position
7:18780738..18808466
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AA seq
610 aa
AA seq
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MGASPGRDAGWLPPFLVSLLMVAVSPAQSQGCPQRCDCFAKLKTVSCFGKRLSSLPDGIP
LDTKVLDLSGNKLRWVEQSDLLSYPRLEKLDLSDNMVSSLEPNAFSSLQNLRSLSLRGNQ
LKLVPMGAFSRLSNLTSLDLSGNKIVILLDFTFQDLKSLKNLEVGDNDLVYISNKAFLGL
VGLRELTIERCNLTSVSSQSLSYLQNLVVLRLRYLSISTLEDQNFRKLANLRGLEIDHWP
FLEHVPPHSLQGLNLSWLSITHTNITSVPTSALRSLAHLTSLNLSHNPISVLESWALRDL
VRLKELHLVNTNLVAVQPYALGGLRQIGLLNLSANGLVSLEEGAFQSVNTLETLRLDGNP
LACDCRLLWILQRRKTLNFDGASPVCMSPVEVQGRALDAFSDSALFDHFTCQKPKIRNRK
LQQVSAREGQVVSFVCRAEGEPAPVIFWISPQRRRITTKSGGRLTVLPEGTLEIRYAQVT
DSGTYICIASNAGGNDTYFATLTVSGLPLDAALMANRTYYAGDLNDTNLNDTRVFLKFTL
DLKTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQG
GARKFNMKMI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgagccccggccgggatgcgggctggctcccgcctttcctggtctcgctgctg
atggtcgcggtgtcgcccgcccagagtcaaggatgtccccagcgttgtgattgcttcgcc
aagctcaagaccgtgtcctgttttggtaaacgcctgtcctcgctgcccgacggcatcccg
ctggacaccaaggtcctggacctgagtgggaataaactccgctgggtggagcagagtgac
ctgctttcgtatccacgtctggagaagctggacctgagtgacaacatggtcagcagcctg
gaaccgaatgccttctccagtctgcagaacctgcggtcgctttcactgaggggcaaccaa
ttgaaactggtccccatgggggctttctcccgtctgtccaacctaacatcactggacctc
agtgggaataagattgtcattcttttggactttactttccaggacttgaaaagcctgaaa
aaccttgaagttggagacaatgatttggtttacatttccaacaaagcctttctgggcctg
gtggggctgagggagctgaccatcgagaggtgcaacctgacttctgtgtccagccagtct
ctgtcctacctgcagaacctggtggttctgcggctgcgctacctcagtatctccaccttg
gaggaccagaacttccgtaagctggcaaacctgaggggcctcgagatcgaccactggccc
tttctggagcacgttccccctcacagcctgcaggggctcaacttatcttggctgtctatc
actcacactaacatcacctccgtgcccacctccgccctccgcagtctggctcacctcacc
agcctcaacctctcgcacaaccccatctccgtgctggagtcctgggccctgcgggacctc
gttcggctgaaggagctgcatctggtcaacaccaatctggtggcggtgcagccgtacgcg
ctgggcggtctgcggcagatcggcctcctgaacctctccgccaacggcctggtgtccctg
gaggagggggccttccagtccgtcaacactctggagacgctgcgcttggacggaaaccct
ctggcctgcgactgccgcttgctgtggatcctccagcggcggaagaccctgaatttcgac
ggcgcctcccccgtgtgcatgtcgcccgtggaggtgcagggacgggccctggacgccttc
tccgactcggccctcttcgatcacttcacctgccagaagcccaaaatccgcaacaggaag
ctgcagcaggtgtctgcccgcgaggggcaggtcgtgtcgttcgtctgcagagcggagggc
gagccggcgccggtgatattctggatctcgccccagcgccgccgcatcaccacaaagagc
ggcgggcgcctgacggtgttgccggagggcacgctggagatacggtacgcccaggtgaca
gacagcggaacctacatctgcatagccagcaacgcgggcgggaacgacacctacttcgcc
acgctcacggtcagcgggctgccgctcgatgcggcgctgatggccaaccgcacgtactac
gcgggcgacctcaacgacaccaatctgaatgacaccagggtcttcttgaagttcaccctg
gacctcaagaccatcctcatatccacggccatgggctgcatcatgttcctgggggtggtg
ctcttctgtttcattctgctgtttgtgtggagtcgagggagaggccagcacaagaacaac
ttctcggtggagtattccttcaggaaggtggacggacccgccgccagcggagggcagggc
ggcgctcgcaagttcaacatgaaaatgatttga
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