Pungitius pungitius (ninespine stickleback): 119216359
Help
Entry
119216359 CDS
T07626
Symbol
rorca
Name
(RefSeq) LOW QUALITY PROTEIN: RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119216359 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ppug03310
]
119216359 (rorca)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119216359 (rorca)
Nuclear receptors [BR:
ppug03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
119216359 (rorca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119216359
NCBI-ProteinID:
XP_037325002
LinkDB
All DBs
Position
7:complement(18385101..18393653)
Genome browser
AA seq
470 aa
AA seq
DB search
MTRRSWTDLTADMRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSR
QRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQEGTG
GGDGGAPDHARVYRRSDAAAAAAAFGGLDDEGFPFDMPPTPEDPAGGYWRLRGAGSTSSA
QSTPEQNHLDIVDGNQLLHDSRFFSHAIPNPLPEGCTLLEIERITESVLKSHIETSRYSI
EELTRMTWTLYSPEERRAYQTKSAEAMWQQCAVQITNAIQYVVEFAKRIVGFMDLCQNDQ
IILLKAGCLDILLIRMCRAYNPVNNTMLFDGKFTAADLFRALGCDDLVNAVFDLGKSLSR
VQMSEEEMALFSAAVLLSPDRPWLTDVEKIQKLQEKVYVALQLCLQKEGAAEEKLAMMVS
KLPVMRSICDLHMEKLELFRMLHPETAYTFPPLYREVFSSEITFPDSTQG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgactcggaggagttggacagacctcaccgccgacatgagagctcaaatagaggtgatt
ccgtgtaaaatctgtggggacaaatcctcggggatccactacggcgtcatcacctgtgaa
ggctgcaagggcttcttccggcgcagccagcagaacaacgccatgtactcctgctcacga
cagaggaactgtttgatcgaccggaccaaccggaaccgctgtcagcactgcaggctgcag
aagtgcctcgctctgggcatgagccgcgacgcggtcaagttcggccgcatgtccaagaag
cagcgcgacagcctgtacgcagaggtccagaagcaccagcagtcccaggagggcacgggg
ggaggggacggcggcgcccccgaccacgcccgcgtctaccggaggagcgacgcggccgcc
gccgccgccgcctttggcggcctggacgacgagggcttcccgttcgacatgccgccgacc
cccgaggacccggccgggggctactggcggctgcggggcgcgggcagcacctcgtcggcc
cagagcacgccggagcagaaccacctggacattgtggacggcaaccagctgctgcacgac
tccaggttcttctcgcacgccatccccaacccgctgcccgagggctgcaccctgctggag
atagagcgcataactgagagcgtgctgaagtcccacattgagacgagccggtacagcata
gaggagctgaccagaatgacgtggaccttgtacagcccggaggagaggcgcgcgtaccag
accaagtcagctgaggcgatgtggcaacaatgcgccgttcaaatcaccaacgccatccag
tacgtggtggagtttgccaagcgcatcgttggcttcatggacctctgtcagaacgatcag
atcatcctcctcaaagcaggctgcttggatattcttctgattcgaatgtgtcgggcctac
aacccggtcaacaacacgatgctctttgacggaaagtttacagccgccgatctgttcaga
gcgcttggctgcgacgacctggtgaacgcggtgtttgacctcggtaaaagcttgagccgc
gtgcagatgtccgaggaagagatggccctcttcagcgctgctgttctgctctccccagac
cgaccgtggctgacggacgtcgagaagatacagaagctgcaggagaaggtttacgtggcg
ttgcagctctgcctgcaaaaagagggcgcagccgaagagaaactggccatgatggtgtct
aagcttcccgtcatgaggtccatttgcgaccttcacatggagaaactggagcttttccgc
atgctgcaccctgaaaccgcgtacaccttccctcctctttacagggaggttttcagcagt
gaaatcaccttcccagactccacacagggttag
DBGET
integrated database retrieval system
