Pungitius pungitius (ninespine stickleback): 119216370
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Entry
119216370 CDS
T07626
Symbol
comp
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04145
Phagosome
ppug04510
Focal adhesion
ppug04512
ECM-receptor interaction
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119216370 (comp)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119216370 (comp)
09144 Cellular community - eukaryotes
04510 Focal adhesion
119216370 (comp)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119216370 (comp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119216370 (comp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119216370 (comp)
00536 Glycosaminoglycan binding proteins [BR:
ppug00536
]
119216370 (comp)
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Phagocytosis
Opsonins
119216370 (comp)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119216370 (comp)
Exosomal proteins of colorectal cancer cells
119216370 (comp)
Exosomal proteins of bladder cancer cells
119216370 (comp)
Glycosaminoglycan binding proteins [BR:
ppug00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119216370 (comp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
119216370
NCBI-ProteinID:
XP_062419685
LinkDB
All DBs
Position
7:12237480..12244920
Genome browser
AA seq
748 aa
AA seq
DB search
MLWFLVLICVLCMGGHTAAGQRDGEIISQIKMTNMALAEIKELLSQQIKEIVFLKNSVME
CEACGMGGIQPRPSCVPNPCHPGVKCKETPQGVKCGLCPEGMEGDGTHCTDVDECTVTPC
HMGVRCINTSPGFRCGSCPAGYMGPQVQGFGLAYATANKQVCKDINECEGLNNGGCVENS
VCMNTPGSFRCGPCKTGYVGDQRRGCKPERACGNGQPNPCHASAECIVHREGRIECQCGV
GWAGNGYLCGADIDIDGFPDEKLSCPERSCNKDNCLTVPNSGQEDADGDGMGDACDEDAD
GDGILNMQDNCVLVPNVDQRNIDEDDFGDACDNCRAVKNNDQKDTDVDQFGDECDEDLDG
DGIPNQLDNCKRVPNADQKDRDGDKVGDACDSCPYVPNPDQTDVDNDLIGDPCDTNKDSD
GDGHQDSRDNCPAVINSSQLDTDKDGKGDECDEDDDDDGVPDLLPPGPDNCRLIPNPLQE
DSNGDGVGDICEKDFDNDTIIDTIDVCPENAEVTLTDFREYQTVVLDPEGDAQIDPNWVV
LNQGREIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTETDDDYAGFIFGYQDSSSFYVVM
WKQVEQVYWRPNPLRAVAEPGIQLKAVKSDTGPGENLRNALWHTGDTSEQVKLLWKDARN
VGWKDKTSYRWFLQHRPADGYIRVRFYEGPKMVADTGVVIDSTMRGGRLGVFCFSQENII
WANLRYRCNDTLPEDFDTYRAQQVRLAT
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggtttctggtgctgatctgtgtgctctgcatgggaggacacactgcagcagga
caaagagatggagaaatcatcagtcagattaaaatgacgaacatggccctggctgagata
aaagagcttctgtcccaacaaataaaagagattgtgtttctgaagaactcagtgatggag
tgtgaagcttgcggtatgggaggaatccagccccgtccctcctgtgtgcccaacccctgc
cacccgggggtgaagtgcaaggagacgcctcagggtgtaaagtgtgggctttgccctgag
ggcatggagggcgacggcacacactgcaccgatgtggacgagtgtacagtgacgccgtgt
cacatgggcgtgcgttgcattaacacctccccgggtttccgctgtggatcctgtcctgcc
ggatacatgggccctcaggtgcagggcttcggcctcgcttacgccaccgccaacaaacag
gtgtgcaaagacatcaatgagtgtgaaggcctcaacaatggaggctgtgtggagaactcg
gtctgtatgaacacccctggctctttcaggtgcggcccctgtaagacgggctacgttggg
gaccagcggcgcggctgtaagccggaaagggcctgcgggaatggccagccgaacccctgc
cacgccagcgctgagtgcatcgtccatcgagagggtcgaatcgagtgtcagtgtggagtc
ggatgggctggcaacggctacctgtgcggtgcggacattgacattgatggcttccctgac
gagaaactgtcctgtcctgagaggagctgtaacaaggataattgtctcactgttcccaac
tctggtcaagaagatgccgatggtgacggaatgggagacgcctgtgatgaggatgcagat
ggggacgggatcctcaacatgcaggataactgcgtgttggtgccgaatgtggaccagagg
aacatagatgaggacgactttggcgacgcttgcgacaactgtcgcgccgtcaaaaacaac
gaccaaaaagacaccgacgtggaccaattcggtgatgagtgtgatgaagatcttgatggg
gatggaatcccaaatcaactggataactgcaaaagggttcccaacgctgaccagaaagat
cgagatggggacaaagtgggagacgcctgcgacagctgcccttatgttccaaaccctgac
cagacggacgtggacaacgacttgattggcgacccctgtgacaccaacaaggacagtgac
ggcgacggccaccaagactcccgggacaactgcccagccgtcatcaacagctcccagctg
gacaccgacaaggacggcaagggagacgagtgtgacgaggacgacgacgatgacggcgtc
ccggacctgctcccccccggccccgacaactgccgcctgatccccaaccctctgcaggaa
gactccaatggtgacggtgtgggagacatctgcgaaaaggacttcgacaacgacaccatc
atcgacaccatcgacgtttgcccggagaacgccgaagtcaccctcaccgacttcagggag
taccagactgttgttttagacccggagggagacgcgcagatcgaccccaactgggtggtg
ctgaaccagggaagagagatcgtccagaccatgaacagtgatcccgggttggctgttggg
tacacggccttcagtggtgtggatttcgaagggacatttcacgtgaacacggaaacggac
gacgactacgcagggttcatcttcgggtaccaagacagctccagcttctacgtggtgatg
tggaagcaggtggagcaggtctactggcggccgaacccgctcagagccgtggcagaacca
ggcatccaactgaaggccgtgaagtcagacacgggacccggggaaaacttgaggaacgcc
ctgtggcacaccggcgacaccagtgagcaggtcaaactgctgtggaaagatgcccgcaat
gttggctggaaggacaagacctcgtaccgctggttccttcaacaccgacctgccgacggc
tacatcagggttcgcttctacgagggtcccaagatggtggcggacacgggcgtcgtcata
gactccaccatgagaggaggtcgactgggggtcttctgtttctcccaggagaacattatc
tgggccaacctgcgttatcgctgcaatgacactcttcctgaggactttgacacctacaga
gcccagcaggtccgactggccacctga
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