Pungitius pungitius (ninespine stickleback): 119216401
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Entry
119216401 CDS
T07626
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119216401 (trmt13)
Enzymes [BR:
ppug01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
119216401 (trmt13)
Transfer RNA biogenesis [BR:
ppug03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
119216401 (trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_28
CpG_bind_C
Motif
Other DBs
NCBI-GeneID:
119216401
NCBI-ProteinID:
XP_037325097
LinkDB
All DBs
Position
7:19751556..19755501
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AA seq
466 aa
AA seq
DB search
MNAASFASVFSNMAAALSGRCGFFVEKKKRFCKMTVALGKVFCGEHANMEEGSSRRIPCP
LDPKHTVSEDKLDKHLKKCNSREKAKPVYYVENINSGSTDGETLQQVSLSERSRAELQAL
LDKLKSAVTGLQCDVEDSVLSHPVLQEELDNPKNGDSAHKHLKQQSSLLGHLEALGLLGR
GRCFVEFGAGRGKLSHWIHEALKTRDQLQACDDLQLLLVERSSTRFKVDGKHQDTGVQFE
RLQVDIQHLDLSKVQLLGQKRLPLVGVGKHLCGAATDLALRCLLETPRGRGEAEPPRKRL
KTSEPDPADAAPPESGPGPDPGLAPVLGLAVALCCHHRCEWRHYVGQQFFLQRGLGAAEF
SAFCRMSSWATCGLGAANQGRAPQGGGPDRDEEEEEHAPAEEADGVGGFLSAGERERVGR
LCKRLIDGGRLHFLQTRGFHGKLARYVNSQVTLENVVLTAVPSAPS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagcgtcatttgcgtcagtgttttccaacatggcggccgccctgtccggcaga
tgtggcttcttcgtggagaaaaagaaacgtttctgtaaaatgaccgtcgcattaggaaaa
gtgttctgcggagaacacgcaaacatggaggaaggaagcagcagaaggattccatgtcct
ctggaccccaaacacactgtgagtgaagacaaactggacaaacacctgaagaaatgtaac
tccagggagaaagcaaagcctgtttattacgtggagaacataaactctggatcaacggac
ggagagacgctccaacaggtgagtctgtctgagcggagcagggccgagttacaggctctg
ctggacaaactcaagtctgccgtcacaggactgcagtgcgacgtggaggacagcgttctg
tctcatcccgtcctgcaggaggaactcgacaacccaaagaacggagactccgcccacaaa
cacctgaagcagcagtcctccctcttaggtcacctggaggcgctggggctgctgggaaga
gggcggtgcttcgtggagttcggagcaggtcggggaaaactgtcccactggatccacgaa
gctctgaagacccgagaccagctgcaggcctgcgatgacctgcagctgctgctggtggag
cgcagcagcacccgcttcaaggtagatgggaaacatcaggataccggagttcagtttgag
aggctgcaggtcgacattcaacatctggatttaagtaaagtgcagctgctcggacagaag
aggcttccgctggtcggagttggaaaacacctgtgtggagcggcgacagatctggctctg
cgctgtctgttggaaacgccacgagggagaggggaggccgaaccaccgcggaaacgcctc
aaaacctccgaaccagacccagcggacgccgcaccgccagagtccggtcccggtccggac
ccgggcctcgctccggttctgggcctggcggtggcgctgtgctgccaccatcgctgcgag
tggcgccattacgtcgggcagcagttcttcctgcagcggggactcggagcggcggagttc
tctgctttctgtcggatgtccagctgggccacctgcgggctcggcgccgccaaccagggc
cgcgccccccagggcggggggcccgaccgggacgaagaagaagaggagcacgcaccggca
gaggaggcggacggcgtgggcgggttcctctcggcgggggaacgcgagcgggtcggtcgc
ctctgcaagcgtctgatcgacggcggcaggcttcacttcctgcagacgagaggattccac
ggcaaactcgcccgttacgtaaacagtcaggtgactctggagaacgtggttctgaccgcc
gtcccctcggcgccgtcctga
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