Pungitius pungitius (ninespine stickleback): 119216411
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Entry
119216411 CDS
T07626
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119216411 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119216411 (usp24)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119216411 (usp24)
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119216411 (usp24)
Ubiquitin system [BR:
ppug04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119216411 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
UBA
DUF3517
UBA_RAD5A
ubiquitin
UBA_7
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
119216411
NCBI-ProteinID:
XP_037325109
LinkDB
All DBs
Position
7:complement(21354351..21377951)
Genome browser
AA seq
2625 aa
AA seq
DB search
METEEEQHITTLLCMGFPDPDVIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGVGSTGDVETTGRTGTGGFDPPPAYHDVVDSERSNDENGNCSGESMEFPTTNLYELESR
VFTDHWSIPYKREESLGKCLIASTSLARHGLADADENCKRFTDRCMPEAFKKLLTSSAVH
KWGTEIHEGIYNMLMLLVELVAERVKQDPVPVNLMGVLTMAFNPDNEYHFKNRMKACQRN
WAEVFGEESNMFAVSPSNAYQKEPHGWLVDLVNRFGELGGFTAIQEKLNADEIEIACVSA
LVQPLGVGAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPDLLSAIKLLCM
RFQRELVTVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTVSKTVKNAIDTDKLL
DWLVENSVLSIALEGNIDQAQYCERIKGIIELLGSKLSLDELSKIWKIQAGQSSTVIENI
HTIIAAAAVKFSSDQLTHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLE
VLWDLAHLPSLPTSLVQQALEEHLGILSDAYAVKEAVKRGYIIKCIEDIKKTHSQEDDSQ
SSFLTATWGKKKANSVAKASQQSSPQAVWVVPALRQLHEITRSFIKQTYQKQDKSIIQDL
KKNFEIVKLITGSLVCCHRLAVTAAGNNGLSGSTLVDGRYTYQEYLDSHLRFLAFFLQEA
SLYLVWNRAKELWECLVSGPDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLEPY
EITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLAGMDFIWRIAMETPDEEIANEA
IQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATKMLTA
TAMPTVATSVQSPSRYRGGFGSTKLVIIERLLLLAERYVLTIEDLYSAPRTILPHGASFN
GHPVTLHITYESTKDTFTLETHSNETIGSIRWKISEHLSCPVDNVQIFANDSVLTMNRDQ
KLLSQLGFSDEQTLTVKSSGTGTPSGSSESSASASSSSSSAVFNSAYALEQEKSLPGVVM
ALVCNVFEMLYQLANLDETRITLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQKTLF
QATGSRSPSMSSKQQHQPSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMPTSDDEMA
KTSSKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQSMPS
VLDDDVIRDGESLSSRPFRNAGRAGRQLSLCGTPEKSSYRQMSLSERSSIRVEEIVPAAR
VAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSPQPIRETHSTLLPQGVRTRVSSTGS
NCSSSSEGENTPTALHAGICVRQQCVSIKDTIIAREALSLLVTCLQLRCQQLCSFYNLPS
VNDFIIDVLLGSPSGEIRRVACDQLYTLSQTDTSAFNEVQKPNLFLISVVLTAQLPLWSP
TSIMRGVNQRLLSQCTEYFDLRCQLLDDLTTSEMEVLKVSAATMLEDEISWLDNFEPSWS
SEMETSEADNILLAGHLRLIKTLLSLCGSDKEHLGASLIQQLLDDFLFRASRIIINSSNP
TPSPAPPSHDFHPKYDTCSTASSRLAAYEVLVMLADSSLSNLRLITRELMSMHHQSDPSL
CKEFDYLPPVESRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLPEAFLSIEEDTDQPEES
VFYQVQSLFGHLMESKLQYYIPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLDEHLK
QKMGREQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVRGE
VLEGSNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKYDEQIRFPWV
LNMEPYTVSGMARQDCSGEAGEGRGEGPSGGSPRKKVTISENYELVGVVVHSGQAHAGHY
YSFIKDRRGSARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVRRRY
WNAYMLFYQKISDQNSPVLPKKSRVSIMRQEAEDLTLSAPSSPDVSPQSSPRPPRANNDR
LTLLTRLVRKGEKKGLFVEKMPASIYQMVRDENLKFMKNRDVYNSDYFNFTLSLASVNAT
KLKHPDYQPMAKESLQLAVHFLFHTYLHTKKKLRVDTEEWMATVEVLLSKSREACQWMVQ
YLVGPEGREITRVCLLECSVREVRVVVASILEKTLESALHFGDPGVDDLTDTLLSLLDKD
VPENVKNCAQYFGLFSSFAQQGCGPCQLLLKHSAYRRMLVFLLGPNRQNNQNRRWSPAQA
REFLHLHSALALITLHCDLNPQRTEAPGGFVLRVSCVPASTELLPLHADILASLFTPEGQ
PYLLEVMFAMRELSGPLSLLIEMVTYSSYCNEPFSLGVLQLLKTQLETAPPHELKNVFQM
LQELLVMEDPLQTQRLKYAFESEKGLLALMHQSNNVDSRRCYQCVKFLVTLAQKCAPAKD
YFKDLSGHWSWAVQWLQKKMTEHYWTPQSNVSNETSTNKTFQRTISAQDTLAYATALLNE
KEQSGSSNGSDGSPANDGAERSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7878 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaagaggagcagcacatcaccacgctcctctgcatgggcttcccggacccc
gacgtgatacgcaaagcgctgcggctggcgaagaacgacatcaacgaggcggtggcgctg
ctgacgaacgaaagccccgggctggggtacggatacgagccgatggagagcgggcctgcc
cccggcgtgggatccaccggggacgtggagacgaccgggcggaccgggacgggagggttc
gatcccccgcccgcgtaccacgatgtggtggacagcgagcggagcaacgatgagaacggg
aactgctcgggggaaagcatggagttccccaccaccaacctgtacgagctggagagccgg
gtcttcaccgaccactggtccattccctacaagagggaggagtccctggggaagtgtctc
atcgcgtccaccagcctggcccggcacggtctcgctgacgccgacgagaactgcaagcgc
ttcacggaccgctgcatgccggaggccttcaagaagctgctgaccagcagcgccgtgcac
aagtggggcaccgagatccacgagggcatctacaacatgctgatgctgctggtggagctg
gtggcagagcgagtgaagcaggacccggtgcccgtgaacctgatgggagtcctgactatg
gccttcaacccggataacgagtaccacttcaagaaccgcatgaaggcctgtcagaggaac
tgggccgaggtgtttggagaggagtccaacatgttcgccgtctccccgagcaacgcctat
cagaaagagcctcatggctggctggtggatcttgtgaaccgattcggggagctgggagga
ttcacggccatccaggagaagctcaacgcggacgaaatcgagatcgcttgcgtgtcggct
ctggttcagcctctcggagtcggtgctgaatatctaaactccagccttgtccagccgatg
ctcgacccagtcatccataagatgatcacatacgtgcagaacctggaggaaaaggacctt
aaagacaagcgcctggtgagcatcccggacctgctgtcggccatcaagctgctgtgcatg
cgcttccagagggagctggtcaccgtggtggacgacctgaggctggacactctgctgagg
atgctcaagacgccccacttctccaccaagatgaactccctcaaagaggtgacgaagctg
atcgaggagagcacggtgtcaaagacggtgaagaacgccatcgacacggataagctgctg
gactggctggtggagaactcggtcctgtcaatcgcactggagggtaacatcgaccaggct
cagtactgcgagcggatcaaaggaatcatcgagctgctgggcagcaaactgtcgctggac
gagctctccaagatctggaagattcaggcgggtcagtcatcgactgtgatagaaaacatc
cacaccatcatcgctgctgccgccgtcaagttcagctccgatcagctcacccacctcttc
gtcctcatccagaagagctgggaggtggagagcgaccgcgtgaggcagaagctgctcagc
ctcatcgggaggatcggcagggaggctcgctctgaagccaccacgggaaaggtgctggag
gtgctgtgggatctggcccacctccccagtctgcccaccagcctggtccagcaggcgctg
gaggagcacctgggcatcctgagcgacgcgtacgccgtcaaggaggcggtgaagcgcggc
tacatcatcaaatgcatcgaggacatcaagaagactcactctcaggaggacgactctcag
agctcgtttcttactgccacttggggcaagaagaaggcaaactctgtggccaaagcctct
cagcagagcagtcctcaggcggtctgggtggttcctgctctccgtcagctgcatgagatc
acccgttccttcatcaagcagacctatcagaagcaagacaagagcatcatccaggacctg
aagaagaactttgagatcgtgaagctgatcacgggctccctggtgtgctgccatcggctg
gctgtgaccgcggcggggaacaacgggctctccggctccaccctggtggacgggcgctac
acctaccaggagtacctggacagccacctgcgcttcctggccttcttcctgcaggaggcc
agcctctacctggtgtggaaccgggccaaggagctgtgggagtgcctggtctcagggccg
gacgtctgcgagctcgaccgcgagatgtgtttcgagtggttcaccaaaggacaacacgac
ctggagagcgacgtccagcagcagctcttcaaggagaagatcctgaagctggagccctac
gagatcaccatgaacggcttcaatctgttcaagaccttcttcgagaacgttaatctgtgc
gaccatcgcctcaaacgccagggaactcagctgtgcgtggagcgcctcgacctggcgggg
atggattttatctggcgcatcgccatggaaacccccgacgaagagatcgccaacgaggcg
atccagctcatcatcacatacagctacaccaacctcaaccccaagatgaagaaggactcg
gtttctttgcacaagaagttcatcgctgattgttacaagcgactcgaggcagccagctca
gccctcggcgggcctactctgacgcacgccgttacccgggcaaccaagatgctgactgcc
accgccatgccgacggtggccacgtctgtacagtctccatccaggtacagaggggggttt
ggatccaccaagctggtgatcattgagagactgctgctgctggctgagcgctacgtcctc
actatcgaggacctgtactcggctcctcgcactattctacctcacggggcctcgttcaac
ggacaccccgtcaccctgcacatcacctacgagtcaaccaaagacaccttcaccttagag
acccacagcaatgagaccataggaagtatccggtggaagatatcggagcatctgagctgt
cctgtggacaacgtccagatctttgccaatgacagcgtgttgaccatgaaccgggaccag
aagctgctctcccagctgggcttcagtgacgagcagaccctgacggtgaagagctcgggc
accggcaccccctccggaagctctgagtcctcggcgtcggcctccagcagctccagctcc
gccgtcttcaactcggcctacgccctggagcaggagaagtctctgcccggagtggtgatg
gctttggtgtgcaacgtgtttgagatgctttaccagctggcgaacctcgatgagaccagg
atcaccctccgcgtgaggaagctgctgctgctgatcccaacagatcctgaagtgcaggac
gcgctcgacaactttgttcccaaagaatccagcgtctggagccaccagaagacactgttc
caggccacaggctctcgttccccgtccatgtcctccaagcagcagcaccagcccagtgct
gcatccatcctggagtccctcttcaggtcctcggccccgggcatgtccaccttcagagtg
ctgtacaacctggaggtgctgagctcgaagctcatgcccacgtcggacgatgagatggcg
aaaaccagcagcaagtcgttctgtgagaacttcctcaaagccggaggcctcagtctggtg
gtgaatgtgatgcagagagactccatcccatcagaggtcgactacgagaccagacaagga
gtctactccatctgccttcagctggccaggtttcttctggttggccagagcatgccttcg
gtgctggacgatgatgtcatcagggacggcgagtcgctgtcctcccgtccgttccgtaac
gccgggcgggcggggcgacagctgtctctgtgcgggactccggagaagtcgtcctaccgc
cagatgtctctgtccgagcgctcctccatcagggtggaggagatcgtcccggcagctcgc
gtcgccattcagaccatggaggtgggcgacttcacctccaccgtggcctgcttcatgcgt
ctcacctgggctgctgcagccggccggttggacctggtcggcagccctcagccaatcaga
gagacccacagcaccctcctgccgcagggggtccgcaccagagtcagcagcacagggagt
aactgcagctccagcagtgagggggagaacacgccaacagcgttgcatgctgggatatgt
gtgagacagcagtgcgtttccatcaaagacaccatcatcgcccgggaagctctgtcactg
ctggtcacatgtctgcagctacgctgtcagcagctgtgttctttttacaaccttccctcc
gtcaacgatttcatcatcgatgtcctgctgggatctcccagcggagagatccgccgcgtg
gcgtgtgaccagctctacacgctgagccagacggacacatcggccttcaacgaagtccag
aagcccaacttgttcctcatctcagtggtcctcaccgcccagctgccgctgtggagccct
acttccatcatgaggggggtcaaccagaggttgttgtcccaatgcaccgagtactttgac
ctgagatgccagcttctggacgacctgacgacctcggagatggaggtgttgaaggtgagc
gctgccaccatgttggaggacgagatctcctggctcgacaacttcgagcccagctggagc
tctgagatggagaccagcgaggcggacaacatcctgctggcgggacacctgcggctcatc
aagacgctgctgtccctctgcggcagcgacaaggagcacctcggagcatctctcatccag
cagttgttggacgacttcctgtttcgagcctcgcgcatcatcatcaacagttccaacccg
acgccctcgccggccccccccagccacgacttccacccgaagtacgacacgtgcagcacg
gccagcagcaggctggcggcctacgaggtgctggtgatgctggccgacagctcgctgtcc
aacctgcgcctcatcaccagagagctcatgtccatgcaccaccagtcggacccgtccctc
tgcaaggagttcgactacctcccccccgtggagagccggtccgtctcaggctttgtgggg
ttgaagaacggcggagccacgtgctacatgaacgctgtgtttcagcagctctacatgcag
cccggccttccagaggccttcctgtccatcgaggaggacacggatcagccggaggagagc
gtcttctaccaggtccagtctctgttcggccacctgatggagagcaagctgcagtactac
atccctgagaacttctggaagatcttcaagatgtggaacaaggagttatacgtgagagag
cagcaggatgcttacgagttcttcaccagcctggtggaccagctggacgagcatctcaag
cagaaaatgggtcgggaacagatcttcaaaaacacgtttcagggaatcttctccgaccag
aagatctgtaaagactgtcctcaccggtacgagcgagaagaaaccttcatggcgttgaac
ctcggcgtgacgtcctgccaaagccttgagatctcgctggaccagtttgtgaggggcgag
gtgctggagggcagcaacgcctactactgcgagaagtgcaaggagaagaggaccaccgtg
aagaggacctgcatcaagtccctgcccagcgtcctctgcatccacctcatgcgcttcggc
ttcgactgggagagcggacgctccatcaaatacgacgagcagatccggttcccctgggtg
ctgaacatggagccctacaccgtctcggggatggcccgtcaggactgcagcggagaggcc
ggcgaggggcggggcgagggcccctcggggggctcgcccaggaagaaggtcaccatctcg
gagaactacgagctggtgggggtcgtggtccacagcgggcaggcgcacgccggtcactac
tactccttcattaaggacagacgaggcagcgctcggggacgttggtacaagttcaacgac
aacgtggtggaggagttcgacatgaacgacgaaaccttggagtacgaatgctttggtgga
gagtaccggcccaaagtttacgaccaatccaatccgtaccccgacgtgcggaggaggtac
tggaacgcctacatgttgttctatcagaagatcagcgaccagaactctcccgtcctgccc
aagaagagccgagtgagcatcatgaggcaggaggccgaggacctgaccctgtctgccccc
tcctcccccgacgtgtccccccagtcctccccccgccccccccgggccaacaatgaccgc
ctcaccctcctcacccgcctggtccgcaagggggagaagaagggtctgtttgtggagaag
atgcctgcaagcatctatcagatggtgagagacgagaacctgaagttcatgaagaaccga
gacgtctacaacagcgactacttcaacttcaccctatctctggcctccgtcaacgcgacg
aagctgaagcatcccgactaccagccgatggccaaagagagtcttcagctggccgttcac
ttcctgtttcacacctaccttcacaccaagaagaagctccgggtggacacggaggagtgg
atggcgacggtggaggtgctgctgtctaagagccgcgaggcgtgtcagtggatggtccag
tacctggtgggaccggagggccgcgagatcaccagggtgtgcctgctggagtgcagcgtg
agggaggtgcgggtggtggtggcctccatcctggagaagaccctggagagcgccctccac
ttcggggacccaggggtggacgacctgacggacacgctgctctctctgctggacaaagac
gtcccggagaacgtgaagaactgcgcgcagtacttcggcctcttcagcagcttcgcccag
caggggtgcggcccgtgtcagctgctgctgaagcactctgcgtatcgccggatgctcgtc
ttcctgctgggacccaaccggcagaacaaccagaaccggcggtggagtccggctcaggct
cgtgagttcctccacctccacagcgctctggccctcatcacgctgcactgcgacctcaac
ccccaacggaccgaggctccaggagggttcgtactgcgtgtgagctgcgtcccggcctcc
actgagctcctccccctgcacgccgacatcctggcatcgctcttcactccagagggacag
ccttaccttctggaggtgatgtttgccatgcgggagttgtcggggccgctctcgctcctc
atagagatggtgacctactcttcatactgtaacgagcccttctccctcggtgtgctgcag
ctgctgaagacgcagctggagacggctccgccccacgaactcaagaacgtcttccagatg
ctgcaggagctgctggtgatggaagatcctctgcagacacagagactcaagtatgccttt
gagtcggagaaaggccttctagctttgatgcaccagagcaacaacgtggacagccggcgc
tgctaccagtgtgtcaagttcctggtcacgttggcccagaagtgtgctccagccaaagat
tacttcaaggacctttctggtcactggagctgggcggtgcagtggctgcagaagaagatg
actgaacattactggactccacagagcaacgtctccaatgagacgtccaccaacaagacc
ttccagcgcaccatctctgcacaggatacgctggcctacgccacggcgctgctcaacgag
aaggagcagtccggcagcagcaacggctccgacggcagcccggccaacgacggcgccgag
cgcagcctccgtcaggggtcggagtctcccatgatgctcggcgattcaaagagcgacctt
gaagatgtcgacccctag
DBGET
integrated database retrieval system
