Pungitius pungitius (ninespine stickleback): 119216441
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Entry
119216441 CDS
T07626
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119216441 (chd1l)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119216441 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
LIG3_BRCT
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
119216441
NCBI-ProteinID:
XP_037325188
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MSNILLKIKSCVPGKQKTALTQSDLVKCGLNGIQLRPYQLHGVHWLTQCLKNQQGCILGD
EMGLGKTCQTISLLVFVSGAPGRKGPFLVLSPLSVMENWRKELESFAPSLTVLCYKGDKE
RRAELQRETQTQDFDVMLTTYELCLKDASFLRRWSWKVLVVDEAQRLKNQNSLLHKTLTQ
FSAGFRVLLTGTPIQNNLQELYSLLSFVQPNIFTAEEADNFTLSYADVQTRPALAAELQS
LLEPFLLRRVKSEVAVDLPKKTELLMYHGMSTLQKKYYKALLMKDLEAFGNDHGNNNNNR
LLNILMNLRKCVDHPYLFHGVEPEPFEMGEHLVEASGKLSLLDGMLAHLHKGGHRILLFS
QMTRMLDILQDYMEFRGYSYERLDGSVRGEERNLAVKNFSSKDIFVFLLSTKAGGVGLNL
TAADTVIFMDSDFNPQNDLQAAARCHRIGQSRPVKVIRLLARDTVEEIMFSRAASKLHLT
DTVMEEGRFSLLDRAQAGAAGLQLGEVLKFGVDKLLSSEESSVTEVKLEKILGPSRDGQW
EDEDLRGEEEEEEEEESDGQNHMYYFEGRDYSKESSSEDQKLFERLLEEQLAESQRAAAG
GRALRHKAGPVSLSLSLAPPTRKRKPLTEAELELRSQRREEAAAKRAKLQQDTKKKQQEQ
KRKKRAAWWESCGYRSPCLPPADSEEDEDEEEEDDSSSVCSTDSDSTAIRYVLGDVTRPH
AARGDAIIVHCVDDSGRWGRGGLFTALQARSDEPRKKYESAGEMKDLDIGNVLLFPIDDK
QSRLDGRDQLALIVAQRRDKDNNLSGILLSALDDALKKIYAAAKTNKASVHLPRIGHATR
GFNWYGTERLVRKHLASRGVATFIYYHSRAAKSSAPQVTTAASSRETEAGSPPPGPSDPL
RAPPELPDFMSGVRVFFYNLAASERRTLARHLVTYDGDEEEVMSPEVTHVVAEVESDIQS
QELRDLCGRFPGAVPVQKDWLNFCFSKQRRVDAAAFLHPLG
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatattttgttaaaaataaaaagctgcgtgccagggaagcagaagacggctctt
actcagagtgacttggttaaatgtggattaaatgggatccagctgagaccttaccagctg
catggggtccactggttgacccagtgtctgaagaaccaacaaggatgcattctaggagac
gagatgggtttgggaaaaacatgtcagacgatctctctgctggtgttcgtgtcaggagct
cctgggaggaaaggtccgttcctggtgctgagcccactctctgtcatggagaactggagg
aaagagcttgaaagcttcgccccgtctctcactgtgttgtgttacaaaggagacaaagag
cgacgggctgagcttcagagggaaacacaaactcaggactttgatgtcatgctcactacc
tacgagctgtgtctcaaagatgcttcattcttgcgacggtggagctggaaggtgctcgtt
gtagatgaagcccagaggctgaagaatcagaattcgttgttgcacaagaccttgactcag
ttctcagcggggttcagagtcctgctcaccgggacccccatccagaacaacctgcaggag
ctctactccctgctgagcttcgttcagcccaacatcttcacggccgaggaggcggacaac
ttcaccctctcttacgccgacgttcagactcgacctgctttagccgccgagctgcagagc
ctcctggagcccttcctgctccgccgggtcaagtcggaggtggcggtcgatctgccgaag
aagacggagctgctgatgtaccacggcatgtccaccctgcagaagaaatactacaaggcc
cttctgatgaaggatctggaggcttttggaaacgaccacggcaacaacaacaacaaccgg
ctgctgaacatcctgatgaacctgaggaagtgtgtggaccacccgtacctgttccacggg
gtggagccggagccgtttgagatgggggagcatctggtggaggccagcgggaagctgtct
ctcctggacggcatgttggcgcacctccacaaaggaggccatcggatcctgctcttctct
cagatgacgaggatgcttgacattctgcaggactacatggagttcagaggttacagctac
gagcgtctggacgggtcggtccgaggggaagagaggaatcttgccgtgaagaacttcagc
agcaaagacatctttgtctttctgctcagcactaaagcagggggggtcggcctgaacctc
acagccgccgacacggtgattttcatggacagcgacttcaaccctcagaacgacctgcag
gccgccgcacgctgccaccggattggtcagagcaggccggtgaaagtgatccgcctcctg
gcgagggacaccgtggaggagatcatgttctcgcgagccgcgtccaagttgcacctcacc
gacacggtgatggaggaagggcgcttctccctgctggaccgggcccaggccggcgccgcg
ggcctccagctcggcgaggtcctgaagttcggggtggacaagcttctgtcgtcggaggag
agctccgtcaccgaggtgaagctggagaagatcctcggcccgtcgcgggatggtcagtgg
gaggatgaagacctcagaggagaagaagaggaggaagaggaggaggaatctgacggccag
aaccacatgtactactttgaggggagagactacagtaaagaaagcagctctgaagaccag
aagctcttcgagcgtctgctggaggagcagctggccgagtcccagcgagcagcagcagga
ggtcgagctctgcggcacaaagccggaccggtgtcgctgtcgctgagcctcgcccccccg
accaggaagaggaagcccctcacggaggcggagcttgagctccggagccagagacgcgag
gaggccgccgccaagagagccaaacttcagcaggacacgaagaagaagcaacaggagcag
aaacgcaagaaaagggcggcgtggtgggagtcgtgcggctacaggtcgccgtgtctgcct
ccggcggacagtgaagaagatgaagatgaagaagaagaagacgacagcagcagcgtgtgc
tccacagactcggacagcacggccatccgctacgtcctgggtgatgtcactcgtcctcac
gccgctcggggggacgccatcatcgtccactgcgtcgatgactcgggccgctgggggaga
ggcggtttgttcacggctctgcaggcgagatcagacgagccgaggaagaagtacgagtcg
gccggcgagatgaaagatttggacattggaaatgtgctgctcttccccatcgatgacaaa
cagtccagattagacggccgcgatcaactggccttgatcgtcgctcagcggagggacaaa
gacaacaacttgtccgggatcctcctcagcgctctggacgacgctctgaagaagatttac
gccgccgccaaaacaaacaaagcgagcgtccatcttcctcgcatcggccacgccacccga
ggcttcaactggtacggcacggagcggctcgtcaggaagcacctggcgtccagaggcgtc
gccacgttcatatactaccacagccgagcggcgaagagctctgccccccaggtgaccacg
gcggcctcctcgagagagacggaggcaggaagccccccccccgggccctcagatcctctc
agggccccccccgagctccctgatttcatgagcggggtccgtgtgttcttctacaacctg
gcggcgtcggagaggaggacgctggcacgccacctcgtcacgtatgatggagacgaggag
gaggtcatgagtccggaggtcactcacgtcgtagcggaggtggagagcgacatccaatca
caggagctgagggacctgtgtggtcggttcccgggggccgtcccggtgcagaaggactgg
ctgaacttctgcttctccaaacagcgccgtgtcgacgccgccgctttcctccatccgctc
ggataa
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