Pungitius pungitius (ninespine stickleback): 119216444
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Entry
119216444 CDS
T07626
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03440
Homologous recombination
ppug03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119216444 (brca2)
03460 Fanconi anemia pathway
119216444 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119216444 (brca2)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119216444 (brca2)
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119216444 (brca2)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
119216444 (brca2)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
119216444 (brca2)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
119216444 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
119216444 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
119216444
NCBI-ProteinID:
XP_037325196
LinkDB
All DBs
Position
3:13478992..13491898
Genome browser
AA seq
2938 aa
AA seq
DB search
MDLPSENMFDIYKDAIWKELGPLDPDWFETLTSQAFTEDNVSDQDDLCGNQEANFKTPFD
KTAVDSQLLSTPKVFRHSRVVSPETEDEQSFTEKEALPWTTTQSPYLFKMSTVGIRGAKY
GGFLPQSQDRFDLLLTPQKSPVTYDKQISESLGVQLHPDISWTSSLNTPTAIPSTLILSE
NNESPCQVRSPEYKNVVFVRKLFPSLSNASRVGRVSPKNNDVTAFPQGDISPEVHQNPES
HDPGNPPGSPNQSDLGWKQTLPDAIEDGEIRKTVASVLEGAENVLSIFFTNSSSALRKVK
TEQIKRKHITPTIDDGCISSDFSSTSNAATCEQGTADKEPDRPPSPPLVKTVDSGITQWS
PLSLSDLPPCTLCTSFHCVENNVSTEQLQRDSDSGQLVVRTPLKYTDTAFTKKKRKFVYT
VETPKLQVPGKEKRCQRMDPSPAAPDPGQEVNVTRSKAPDEAHFRSIGMNQMPKQGSLVD
PTPRSAVRAKVNDPDTSQLCKEFVQDFSQMSDHCQLSKVQGDTPGTSFSPSACLSALKRA
KQKTMHANPRHDLGGGGDTHHNNPINDRTIGDSGFQSAVADGAHGSAPSFALPSPEIRGL
QWADEQRTPPVASRKIANGEVHSDGVLQAAETDAKRSIRESQSPGPGRKRELHMESTSAR
RPSTAKEAVENNDCSSRNGHADGHLPEETASLLSVHPSGFQTASNKSIRITSSNLERAKR
LFEETEGERLSGDQPIKCARDSKEEMSVRPEAVKNPTTKSNQPLSSDEANKNTGCQLTAS
QKADVTALCILLEQADTQFEFTPFKTEKPKISCHANATSPLEVDNELDPDFLSGIDFDDS
FNSEVEKHPAVTVVPDEISSISDGKTSRETSEVTSNSTGLLQSNPMKNGRNLSPGEGSTS
STHFSAGSCKVMSAEPKHLDGAGERSKLQNENPLMPGAGFKTAGGNVLRLSKASLARARA
LFADFEGHPVTSETSQDKLSSETGAKSSVHEPTGNLLHRTEGGSTFTDRGHGTEGRVRGS
LSNTEDSVCSEGQVTGIGDDDSANPLANSKMDTTTETSLSAEAKREEDALGRDCDATDGN
AGTSVNRTKSTEGLSAPVPHEETPPKGEVQGMKVNKEPISELENVNAGPAASHSLVVQHN
EEIDNLGFTETPALTNASSLRGKTCRQLQVPSPISGGFQTASGKAVAISSAALKKAKSLL
SECVEVEDKVFVKPTHCKTLPGPTSGNTGFLAASGKKVAFSSEALQKAKALSSDISSTAE
IPAASEAKNADETLAENTEQTHCALTNKGSAKVHVSQRSPLEAKHLLTEFDDGSISASAM
READAFFKDCGVMHGNVRLSGKQEKRKAPLGGYGNENKAATKCKEDPRLEINRISVDLGR
GHAEFENVNTGLDEKHEKMLHPDDAETQKGVFKNTLEFPNAAALHGNSSLRVKSLSPLVC
TTSKNGSPSGIKELSKGGGFCTASGKNVSVSDDAMTKARSLLNESATFEDTIKQLKQLEN
TTPQQKGGFQTASGKAVAISSAALKKAKSLLSECVEVEDKVFVKPTHSKMPLPGPTSGNT
GFLAASGKKVAFSSEALQKAKALSSDISSTAEIPAASEAKNADETLAENTEQTHCALTNK
SSAKVHVSQRSPLEAMKVLTDFAGVECHNSNSLSPHPLKSDLCKLKGVEITFNPPTSRTL
CSASESSLQDSDLQSPPKQSIPRCIFIKEQEHSFNAREGKMTPQVLGRLHDAAAEDVLDC
EIKPASSREGSQVKRPRVSSVGLSGCTETQQELFAQEALDCTKALLEDESLFGQSLSMTL
ENVPLQENTKSSFRPAEERRRPGKRSIEEPEMPGQPPLKRRLLEEFDRTADGPRSSTLHP
EKSCPNGVIKDRRIFKYNVSLHPNITRPGTNGKNYVETRLQNTTPTQCSTPGDRRSAHSK
KPAFVPPFLANAKTDIGNNATLKDNTRTPSAFVPPFKKQRAVVQESSFRPLVEEKEDKLH
QLFVTPFNSNTFTAPTKKSQCSTETAGNKSKEDSETVALADYKNIKKMNNPNLPVGCGSE
GTSAERSLGEGLSRCQDTFQNLPNVELARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVT
RIPLKAAVHGRPPARYTPQQLYRHGVHPHVCEISSDTAESFRFDLRQFVKREAFLDGGGV
QLADGGWLIPSKDGTAGKEEFYRALCDTPGVDPKLISDGWVDNHYRWVVWKQASMERSFP
ETMGSLCLTPEQVLLQLKYRYDVEVDHSRRPALRRITERDDTAAKTLVLCVCGVVSRGQS
PNKRSFDDPRTPRGADSRVGNPSAVVWLTDGWYAVRAQLDEPLTAMLHSGRVAVGGKLIV
HAAQLVGSQEACSPLEAPEALMLKICANSSRPVRWDAKLGFHKDPRPFLLPLSCLYSSGG
QVGCVDMIVLRSYPIQWMERKPEGGIVFRSVRAEEKEARRFNGLKQKAMEILFAKIQDEF
EKEDKGDDKPQRRRRAISRQAIAGLQSGEELCEAVGEDPAHLEAHLSEQQLETLNTYRRC
VMEKKQAQLQDRFQRALESAEASDGSCPKREVTPVWRLSVADSRDQRGSVYQLSLWRPSS
DLQALLKEGRRYKVYNLTTSDGKKHNGSSNVQLTGTKKTQFQELQASREWSATRFQPRVS
TCFVDLQNPEFQSLCGEVDLTGFVIQIVDGQGFSPAFYLADGELNFVKVRCFSSFVQSGL
EDLVKPRVLLSLSNLQLRGQSASPTPVVYAGDLTIFSANPKEGHLQESLSQNRKLRQSQE
NFFLIAEETLSHLVQSDGRRPLSSPALHTRTPAFTTTMIQDTTASGASQQLVRSRGSFTP
LGRKPPAANCSTEKDAGSVKRRRALNYLSHIPSPPLLNLGSVASPCLNKTFNPPRRSGTP
STLKTVQTSAQKAVNSPVEDDWVKDEELAMIDTQALRVGDLLQVHKLQLLKNCTNQQM
NT seq
8817 nt
NT seq
+upstream
nt +downstream
nt
atggatttaccttctgaaaacatgttcgatatttataaagatgcgatctggaaagagctg
ggacccttggaccccgactggtttgagacactgacgtctcaagcgttcactgaggacaat
gtctctgaccaagatgacctgtgtgggaaccaagaggcaaactttaaaacaccctttgac
aaaactgcagttgacagtcagctgttgtcaacccccaaggttttcagacacagtcgagtt
gtgtcacctgaaactgaggatgagcagtcattcactgaaaaagaagctttgccatggacg
acaacccaaagtccgtatttgttcaagatgtcaacagtggggattcgcggtgctaaatat
ggaggtttccttcctcagagtcaggaccgttttgatctgcttcttaccccacaaaaatcc
ccagtcacctatgacaagcaaatatctgaaagtctcggagtacagctccatcctgacata
tcatggaccagttctctgaataccccgacagccattccatcaaccctcattttgtctgaa
aataatgagagtccctgtcaagtgaggtctccggagtacaaaaatgttgtttttgttcgg
aagcttttcccctctctttctaatgcgtccagagttggaagagtgtcacccaaaaacaat
gacgtaaccgccttcccccaaggtgacatttcccctgaggtgcatcagaatccagagtcc
catgaccccgggaaccccccgggttcacccaatcagagtgacctgggttggaaacagaca
cttccagacgccatcgaggatggagaaattcgcaaaacagttgcaagtgttcttgaggga
gctgaaaatgttctctctatatttttcaccaacagtagctctgcactgaggaaagtcaaa
actgaacaaatcaaaagaaagcatatcactccaaccatagacgatggctgcatctcctcg
gacttctcatccacaagcaatgctgcaacctgtgaacagggaaccgctgataaggaacct
gatagacccccctcacccccactggtgaaaactgtggatagtggaatcacacagtggtct
ccgttgagtttatctgatctcccaccttgtactctgtgtacttctttccactgtgtggaa
aacaatgtttcaacagaacaacttcagcgtgactcggactctggccagcttgtagtgagg
acacctttgaaatacacagatactgcatttaccaagaaaaagagaaaattcgtgtacacc
gttgagactcccaaactgcaagttccaggcaaagaaaagcggtgtcagaggatggaccca
tccccagcagctccagatcctggacaagaagttaatgtgacgcggtcaaaagccccagac
gaagcacactttcgcagcatcgggatgaaccagatgccaaaacagggaagtcttgtcgac
ccaactccacgttctgctgtacgagcgaaagtcaacgatcctgacacgtcacagctctgc
aaagagtttgtacaagatttcagccaaatgtcagaccactgtcaactgagtaaggtacaa
ggggatacacctggaaccagcttctctccatctgcttgtctgtctgcactgaagcgagct
aagcagaaaacaatgcatgcaaaccctcgccatgacctcggcggcggcggtgacactcat
cacaataaccctatcaatgaccgcacaataggtgacagtggattccagtctgctgttgca
gatggcgctcatgggagtgctccatcattcgcccttcccagcccggagatccgtggtctg
cagtgggccgatgaacaaaggacccctcctgtcgcatccagaaagatagcgaacggagaa
gtccattctgatggtgttttacaagcagcggaaaccgatgccaagcggtcaatcagggag
agtcagtccccgggtcctggcaggaagagggagctgcacatggagagcacatcagcacga
cgacccagcactgcaaaagaagctgttgaaaacaatgattgcagctcacgtaacggtcac
gccgatggccacctgccagaggaaaccgcttctcttctttccgtccatccatctggattc
caaaccgcttcaaataagagtatacgcatcacttcatccaacctggaaagagccaaacgt
ctctttgaagagaccgaaggggaaagactttcaggggaccagcccatcaagtgtgccaga
gactctaaggaggaaatgagcgtgagacccgaggcagtgaaaaatccaacgactaagtcg
aatcagccactttcttcggatgaagcaaataagaataccgggtgccagttaaccgcttcc
cagaaagctgacgtgacggcgctgtgtattctcctggaacaagcagacacccagtttgaa
ttcacaccgtttaaaactgaaaagccaaaaataagctgccacgccaacgccacctctcca
ctagaagttgacaacgagcttgacccagactttctctctggtatagactttgatgacagt
tttaattcagaagttgaaaagcacccggcagtgaccgtggtacctgacgaaataagctcc
atttcagatggtaaaactagccgtgagacatctgaggtcacaagtaattccacaggtttg
ttgcagtcaaacccaatgaaaaacggaagaaatctctctcctggggaggggtctacctct
tcaacgcacttctccgcaggcagctgtaaggttatgtcagctgaacccaaacatcttgac
ggagccggtgaaaggagcaagctgcagaacgagaatcctttaatgcctggtgcgggattt
aagacggcggggggaaatgttttgagactttctaaagcgtctctggcgagagctagagct
ctgtttgccgattttgaggggcatcctgtgacgagtgaaacgtcccaggacaagctaagc
agcgaaaccggtgcgaaaagcagcgtgcatgaacccactggtaaccttctgcatcgtaca
gagggcggttctacgttcacggatcgtggtcacggcactgaggggagggtaaggggctct
ctttccaacacggaggactctgtgtgttcagagggacaagtcacaggcattggagatgac
gattctgcaaatcctttggcgaacagcaagatggacacaaccacagagacttccctttca
gcagaggcaaagcgagaggaggacgcgctcggcagagactgcgatgctaccgacggtaac
gccggcacgtcagtcaaccgcacgaagagcaccgaaggcttgtccgcgcctgtccctcat
gaggaaacccctccaaaaggggaagttcaagggatgaaagtcaacaaagagccaattagt
gagttggaaaacgtgaatgctggaccagctgcgagccattcattggtcgtccaacataac
gaggagattgacaatttaggttttactgagacaccggctttaacaaacgcgtcctctctc
cgaggaaaaacctgccgtcaacttcaagttccatcgcccataagtggggggtttcagaca
gccagcggcaaagcggtagctatttcatctgcagccctcaagaaagccaaatctctgtta
agtgaatgtgttgaagtagaggacaaagtctttgttaagccaacccattgtaagacgctt
cctggtccgacatccgggaatactgggtttctcgcagccagcgggaagaaagtggcgttt
tcctctgaggcgctccagaaggccaaagctctctccagcgacatcagttccactgcagag
atcccagcggcttcagaagcaaagaacgctgacgagacgctagccgaaaataccgagcaa
acacattgtgctctcacaaataaaggcagcgctaaagtccacgtgtcacagagatccccg
ttggaagcaaaacaccttttgacagaattcgatgatggttctatttccgccagcgctatg
cgagaagcggatgctttcttcaaggactgtggcgtgatgcatggtaacgttcgcctgtca
ggaaaacaagagaaaaggaaggcaccgctgggcggatatggcaatgaaaataaagccgct
acaaaatgtaaagaagatccgaggttggaaataaacagaatttctgtagatcttggaagg
ggacacgcagagtttgaaaacgtgaacacgggactagatgaaaagcatgaaaagatgctg
catcctgacgacgcagagacccagaagggtgtttttaagaatacgttggagtttcccaac
gcagctgctctacatggaaactcatctttgagggtgaagagcctttctccactggtgtgc
acaacatcaaagaacgggagtccctcgggcattaaggagttgagcaaaggtggtggattc
tgcacagccagcgggaaaaacgtctccgtgtctgatgacgcgatgacaaaagcaaggtct
cttttgaatgaaagtgctacatttgaggacactatcaaacaactgaaacaattagaaaac
actactccacaacagaagggggggtttcagacagccagcggcaaagcggtagctatttca
tctgcagccctcaagaaagccaaatctctgttaagtgaatgtgttgaagtagaggacaaa
gtctttgttaagccaacccattccaagatgccgcttcctggtccgacatccgggaatact
gggtttctcgcagccagcgggaagaaagtggcgttttcctctgaggcgctccagaaggcc
aaagctctctccagcgacatcagttccactgcagagatcccagcggcttcggaagcaaag
aacgctgacgagacgctagccgaaaatactgagcaaacacattgtgctctcacaaataaa
agcagcgctaaagtccacgtgtcacagagatccccgttggaagcaatgaaagtattgaca
gattttgctggtgttgaatgtcataattcaaactcattaagcccacatccccttaaatca
gatctatgcaaactgaaaggtgtggaaataacttttaatccccccacatccaggaccctg
tgtagtgcctctgaatcctctttgcaagacagtgacctccaaagtcctccaaaacaaagt
atccctaggtgcatttttatcaaagagcaggaacattcatttaatgccagagaaggtaaa
atgaccccccaagtattgggcaggcttcatgacgccgctgcagaggatgtgttggactgc
gaaatcaaaccggcaagcagcagggaggggtcgcaggtgaaaaggccacgggtgtcttca
gttgggttaagtgggtgcactgaaacgcagcaggagctgttcgcccaggaagccctggac
tgcaccaaagctttgttagaggacgaaagtctgttcggccaaagtctctcaatgactttg
gaaaacgtgccactgcaagaaaacaccaaatccagcttcagacctgcagaggaacgacgg
aggcctgggaaaagatcaatagaggaaccagagatgcccggtcagcctcccctgaaaaga
cgattactggaagaatttgacagaactgctgatggtccaagaagttcaacactccatcca
gaaaaaagttgtccaaatggtgtaattaaagacagaaggattttcaagtacaacgtctct
ctccaccccaacatcaccaggccgggcacaaatgggaaaaactatgtggaaaccagattg
caaaatacaaccccaacgcaatgctcgaccccgggagaccgcagatcagcacattccaag
aagccggcgtttgttcctcctttcctcgcaaatgcaaagacggacatcggcaacaacgca
acgctgaaggacaacacgagaacaccttctgcattcgttcctcctttcaaaaaacagaga
gctgttgtccaagagagctccttcagaccactggtggaggagaaggaggataaactccat
caactttttgtaacacccttcaacagcaacacttttacagcgcctactaaaaaaagccaa
tgctctacagaaacagccggtaacaaaagcaaagaagacagtgaaaccgtggccttggct
gactataagaatattaaaaagatgaataatccaaacctccctgttggctgtggatcagag
ggcacttctgcagagaggtcacttggggagggcttgtctagatgccaagacacatttcag
aatcttcccaatgtcgagctggcgcgagatatgcaagacatgaggatcaggaaaaagaag
cggcagaccattcgacctttgccgggaagtttgtttctcaccaaaacctccggagtgaca
aggataccgttaaaggctgcagtccacggaaggcctcctgcacgatacactccgcaacag
ctgtacagacacggagttcatccgcatgtgtgtgagatctccagtgacaccgccgaatct
tttcgcttcgatttgaggcagttcgtcaaacgggaagctttcctagacggaggtggtgtt
cagctcgctgacggaggatggctgatccccagcaaagacgggactgcggggaaagaagag
ttttatagagcactatgtgacaccccgggcgtggatcccaaactgatcagtgacggttgg
gtggacaatcactaccgatgggtggtgtggaagcaggcgtccatggaaagatcctttcca
gaaacaatgggcagcctctgtctcaccccggagcaggttctcctgcagctgaagtacagg
tacgatgttgaggtggaccacagccgccggccggctctgaggaggatcacggaaagggac
gacacagccgccaaaaccctggtcctgtgtgtctgcggggtcgtctccagaggtcagtcc
cccaacaaacggagtttcgacgacccaaggacgccacgaggtgccgactcccgggtaggc
aatccgtcggcagtggtctggctgacagacggatggtatgccgttagagcccagctggat
gaacccctgaccgccatgcttcatagcggccgagtcgccgtcggtggcaaactgatcgtc
cacgcggctcagctggtgggatctcaggaagcttgctcccctctggaggcacctgaagct
ctcatgttaaagatctgcgccaatagcagcagacctgttcgatgggacgcgaaactgggg
ttccacaaggatccgaggcccttcctgcttccgctctcttgtttgtacagcagtggagga
caagtgggatgtgtggacatgatcgtactgagaagctaccccatccagtggatggagagg
aaaccagaaggaggcattgtcttccgatcggttcgcgccgaagagaaagaggcgagacga
ttcaacggcctcaagcaaaaagctatggagatcctatttgcaaagattcaagatgaattt
gaaaaggaggacaaaggtgatgacaaacctcaacgcaggaggcgggcgatcagtcgtcag
gctattgcaggtcttcaatctggagaggagctgtgtgaagctgtgggggaagacccagct
cacctcgaggctcacctgagtgagcagcagttggagaccctgaacacgtacaggcgttgt
gtgatggagaagaagcaggcgcagctgcaggatcgtttccaacgagctcttgaaagtgca
gaggccagcgacgggagctgtcccaagcgagaggtcacgcctgtgtggcgactcagtgtc
gctgactccagggaccaacgcggcagtgtttaccagttgagcctttggcgaccctcctcg
gatctccaggctttactgaaggaaggccgtcgatacaaagtctataatctcaccacttcg
gatggaaagaaacacaacgggagctcaaatgttcagctgactgggacaaagaaaactcag
tttcaggaacttcaggcttctcgagaatggtcagcaacccgttttcaaccgagggtctca
acctgctttgtggaccttcaaaacccagaattccagtcgctgtgtggagaagtagatctc
acaggatttgtgatccaaatagtggatggacagggtttctctcctgcattttatctggcc
gatggggaactcaactttgtcaaagtccgctgttttagcagctttgttcagtccggcttg
gaggatttggtaaaaccacgtgtgctgttgtctctgagcaacctgcagctgagaggccag
tcggcatcgcccactccggttgtgtacgccggagatctgaccatcttctcagcaaacccc
aaggaaggtcatctccaggaatcactcagccaaaacagaaaactacgtcagagtcaggaa
aacttctttctaattgctgaagagacgctttcacatttagtgcaatctgacgggcggagg
cccctctcttctccggccttgcacacacgaaccccagcatttacaacgaccatgatacaa
gacacaacagcaagtggcgcttctcagcagcttgtcagaagccgcggctccttcacacct
ttaggcaggaaacctcccgcagcaaactgttcgacagagaaagacgccggcagcgtgaag
aggaggagagctttgaactatctgtctcacataccgtctccgccgctcctcaatctgggc
tcagtggcttccccgtgtttaaataagacattcaacccccctcggcggtccgggacacca
agcactttaaaaactgtacagacttcagctcagaaagctgtcaattcaccggtggaggat
gactgggtgaaagacgaggaactggccatgatcgatactcaggcattgcgggttggtgat
ttactgcaggtacataaacttcaacttttaaagaactgtacaaatcaacaaatgtaa
DBGET
integrated database retrieval system
