Pungitius pungitius (ninespine stickleback): 119216522
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Entry
119216522 CDS
T07626
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119216522 (hps3)
Membrane trafficking [BR:
ppug04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
119216522 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
119216522
NCBI-ProteinID:
XP_037325343
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Position
7:complement(3455948..3467528)
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AA seq
1077 aa
AA seq
DB search
MVHVYNCHPFSSQQIVQVEQEPGLICCGGGALFVVATGGCKVEAYDLEKEGCPLICRFAT
MGTVKSIQHSRMGDYLVTIEEKNCATYLRAYTNWRYQAEGKARVGVRLLGHLLRGASVRG
GVQMEIIEIPLSERPVAVACCPVTGDLLVGCENTLVLFTLRRQNQQSQNQSQQMVQSTWT
NSQQRSSQGQIMDSNPNFLDFERSVILHLSQMNPKQVALCGEYVAVQGELEVLVVKLETS
SEPKTLEESSDTKKTDHLEDPVDFQVLPIHQELLGDRAKECDIAVSVEKTGLEDSKGQYT
LSYVLFRRFTPDFFQGCSVEETQLHSLQLYPLFTGNQSVSLQEPSCVFCFFSLPSAGYLY
SLKGGVELLSAYQYPEKVLKAVLTDYLLHVITKSALQCFTVRCAAVAARIEDPYIDSTMK
ACPPCSMEVCALRIQLFIGLRSMCVYGHHVILLSAADAETTEEPERTTQRRGLELKEHTM
LTGIFLAVGIDPATTPALESLLSRPFVSRKWTISSPKPASTAGHGWNLYVVDTVSPLTLY
QEMVEYSQRYAETNPQAQSLRHLLSEAHLLLRTSLLQTSEQQRITEGDSSLSPQAGTGGP
AEEPAAVRTDCRELEEAFKQNCAQLGDCFSRGSQRECHLALPYYRMSGLSVTELMARNRP
LPGSPHAYGPGFLFYLKHYLFEETEQILSQEAADEVIDIFSQSEPSQLVSVCASPSLINI
SPAKTLQILQHLEDTAGVSVPLTTTMATMMLRLDDLPEYTRLMERHAEMVLVYGFIEEPR
MLLHGGDGGQHAHIRPTALTRQLAKSQPGLLVAAVVALHENNKVQLEHADHIFKELDCEN
CLQVDFWEAMLMASSQETIIQELLFRVASVYIDRLTNTPLETHTNGPHTPVKRRPLKSAD
DLINSCSHYGALYPWLIVLNPAHTTSSQHQEALYKLQSLLCGPSLSVASVMPLMERLSDQ
TLWGFSLHLLCATRRGQYDSSIEKMLDRCPQAIIAYANHHLQDNHMVLWWQKLLPELCNR
TRVAADNGILLAALKETLVVVAMETSPTEFLELIPDDGAVSYFLPHLLTCSQRHLLA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggtgcatgtttacaactgccatcctttctcctcacagcagatagtacaggtggagcag
gagcctggactcatctgctgcggaggtggggccctgttcgtggtggctactggaggatgc
aaggtggaggcctatgatttggaaaaggagggctgccctctcatttgtcgctttgccacc
atgggcacagtgaagagcatccagcacagccggatgggagattacctggtgaccattgaa
gaaaagaactgcgccacctatttgagagcatacaccaactggcgctaccaggcggagggg
aaggcccgtgtcggggtgcgtttgttgggccacctgctgcgtggggcgtctgtgcggggc
ggagtgcagatggagatcattgagatccccctgtcagagcgccctgtcgccgtggcgtgt
tgcccggtaacaggagaccttctggtcggctgcgagaacactttggttctgtttactttg
aggagacagaaccagcagagccagaatcaaagtcagcagatggttcagagcacctggaca
aactctcagcagagatccagtcaaggtcagatcatggattcaaacccgaatttcctggat
tttgaacgctcagtaatcctgcatctttcacaaatgaaccctaaacaggtggcgctgtgt
ggagagtatgttgcagtgcagggggagctggaagtgcttgtcgtaaaactggagacatcc
tctgaacctaaaaccctggaagaatcatcagacacgaagaaaacagaccacctggaagac
ccggttgactttcaggtccttccgatacaccaagagttgcttggtgatcgagctaaagag
tgcgacattgctgtcagcgtggagaagaccggcctggaggacagtaaaggacaatacaca
ctgtcgtatgttctcttcaggcgttttactccggacttcttccagggctgcagtgtggag
gagacccaacttcactccctacaactctacccgctgttcaccgggaaccagtcggtgtct
ctgcaggaaccatcctgcgtattctgcttcttctccctcccctccgccggctacctgtac
agtctgaagggtggagtcgagcttctctcggcctatcagtatccagagaaggtcctgaag
gcggtgctgacagactacctgttgcacgtcattacaaagagtgctttgcagtgtttcaca
gtgcgctgtgcagcagtagcagccaggattgaagacccatacattgacagcaccatgaag
gcctgtccaccctgcagcatggaggtgtgtgccctccggatacagctgtttattggtctg
cgttccatgtgcgtctacggccaccatgtgatccttctatccgccgctgacgcggagaca
accgaggaacccgaacgcaccacacagcgcagaggccttgagttgaaagagcacaccatg
ctgactggtattttcctggcggtgggaatcgatcccgcaaccacgccagctctggagagc
cttctttcgcgccccttcgtgagcaggaagtggacaatctcttcccccaaaccagccagc
actgcaggacacggatggaatctttacgtggtcgacaccgtctcccccctcactctttac
caggagatggtcgaatacagccagcggtacgcggagaccaacccgcaggctcaaagtctt
cggcacctcttgagtgaagctcacctcctcctgcgaacctccttactccaaacttcagag
cagcagcgaatcacggagggagactcctctctgtctccgcaggccggtacaggcgggccg
gctgaggaaccggccgctgtgcgcacagactgtagagaactagaggaggccttcaagcag
aactgtgcacagctgggagactgtttcagcagggggagtcagagggagtgccacctggct
ctgccctactacaggatgtctggtttgtcggtcacagagctcatggcccggaaccggcca
cttcctggcagccctcacgcctacggccccggcttcctcttctacctgaaacattacctg
tttgaagaaaccgagcagattctcagtcaggaggctgctgatgaggtcatagacattttc
agccaatcagagccctcgcagcttgtcagtgtttgtgccagcccgtctctgataaacatc
agtccagccaagacgttgcaaatcttacaacatctggaagacacagctggcgtgtctgtt
cctttgacaaccaccatggcaaccatgatgttgcgtttggacgacctgccagagtacacg
cgtctgatggaaagacacgcagagatggtgctggtgtacgggttcatcgaggagcctagg
atgctgctgcacggcggagatggaggccagcacgcacacatccgtcccacagcattgacc
cgccaactggcaaagtcccaaccaggactgctggtggctgctgtggtggctttgcatgaa
aacaacaaagtccagctggaacacgctgatcacatattcaaggagctggactgcgagaac
tgcttacaggtggatttctgggaggcaatgctcatggcgtcctcacaggaaaccatcatc
caggaacttctgttccgagtggcgtccgtctacatcgaccgactgaccaacacacccttg
gaaacacacaccaacggaccacacacgcctgtgaaacgcaggccactgaagagcgccgac
gatctgattaactcgtgctcccattacggtgctctgtacccgtggctcatcgttctcaat
ccagcgcacacaaccagctcacaacaccaggaggcgctgtacaaattgcagtctctcctc
tgtggcccgtcgctgtcagtggcctccgtcatgcctctgatggagcgtctttcagaccaa
accttatggggcttcagcctgcacctcctctgcgccaccaggagggggcagtacgacagc
agcatcgagaagatgctggaccgatgtcctcaggccatcatagcctatgccaaccaccac
ttacaagataatcacatggtgttatggtggcagaagctgctcccagagctttgtaacagg
acgagagttgccgcagacaacggcatcctattagctgctctcaaagagacgctggtcgtg
gttgccatggagacaagccccacagagttcctggaactgattcctgatgatggagccgtc
tcgtatttcctgcctcaccttttgacatgtagccagagacacctgcttgcatga
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