Pungitius pungitius (ninespine stickleback): 119216526
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Entry
119216526 CDS
T07626
Symbol
lrrc8db
Name
(RefSeq) leucine rich repeat containing 8 VRAC subunit Db
KO
K22038
volume-regulated anion channel
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119216526 (lrrc8db)
Ion channels [BR:
ppug04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
119216526 (lrrc8db)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_9
FTH
DUF4897
CaMKII_AD
Motif
Other DBs
NCBI-GeneID:
119216526
NCBI-ProteinID:
XP_037325349
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All DBs
Position
7:6700067..6706951
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AA seq
851 aa
AA seq
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MFSLTEVASLNDIQPTYRILKPWWDVFMDYLGIVMLMLAIFSGTMQLTKDQVVCLPILEE
SPEGPGAFLGPRPPETADRLWNKESAMGEQAAPLMAKRPPDRIGPTVTFPQSGTLVQPLP
TGVRTKLDFQQYVFVNQMCYHVALPWYSKYFPYLALIHTIVLMVSSNFWFKYPKTSSKIE
HFVSILGKCFESPWTTKALSETACEDSEENKQRLAGASSLLKHLSTSSEEGSPNQSAPML
TKTGVTFSAEKLVSEVPAMTILDKKDGEQAKALFEKVRKFRAHVEDSDLIYRLYAIQTVI
KTVKFILILCYTMTFVASIDFDHVCEPEIKHLTGYTKFHCTHNMAFMIKKLLVSYIALIC
VYGVISIYTLFWLFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYDQLYSKRF
GVFLSEVSENKLREISLNHEWTFEKLWQHVTRNIQEKLELHLFMLSGVPEAVFDLTDLEI
LKLELIPEARITAKISQMTNLQELHFYHCPAKVEQTAFIFLRDHLRCLHVKFTDVAEIPS
WVYLLKNLRELYLVGNLNSENNKMIGLESLRDLRHLKVLHLKSNLTKVPTNITDLSPHLI
KLVIHNDGTKLLVLNSLKKMLNLAELELLNCELERIPHAIFSLNNLQELDLKSNNIRTIE
EIISFQHLKRLTSLKLWHNKIISIPVSISHVKNLESLYLSHNKLESLPSSLFTLLKLRYL
DVSHNSIVVIPLEAGFLQNLQYFAITGNKVEVVPKQLFKCNKLRTLCVGHNCISTIPEKI
GQLSQLTHLELKGNCLDRLPAQLGQCGLLRRCCLIVEDHLFDSLPMEAKESINQESGVSF
PNGCKCLSDGR
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgttctccctcacagaagtagcctctctgaatgacatccagccaacttaccgaatactg
aaaccatggtgggacgtcttcatggattaccttggtattgtcatgttgatgttggccata
ttttctggaacaatgcagttaactaaagaccaagtggtttgtcttcccattctggaagaa
tctccggaggggcctggggccttcctgggaccccgaccaccagagacagccgatagatta
tggaacaaagaaagtgccatgggagagcaagccgctcccttaatggccaaaaggcctcct
gatagaattggcccgacagttaccttcccccagtcgggtactttagtacagcctttgcct
actggcgtcaggacaaaactggattttcagcagtatgttttcgtcaaccagatgtgctac
cacgtcgccttaccttggtattccaaatatttcccataccttgctctgatccacaccatt
gtgttaatggtcagcagtaacttttggttcaagtacccaaagacaagttccaaaatagaa
cactttgtttccatcctgggaaaatgttttgagtcgccttggactaccaaagctctgtcg
gagacggcgtgcgaagactctgaggagaacaagcagagactggctggggcctcctccctc
ctgaagcatctgtccacaagtagcgaggagggtagtccaaaccagtctgccccaatgctc
actaaaaccggggtcaccttttctgctgagaagctcgtgagtgaagttcccgccatgact
atactggacaagaaagacggcgagcaagctaaagccctatttgaaaaagttcggaaattc
cgagcccacgttgaagacagtgacttaatttacaggctatatgccattcagaccgtcatc
aaaaccgtcaaattcattttgatcctgtgctacacgatgacttttgttgcctccatagat
tttgaccacgtgtgtgagcctgaaataaagcatttgactggatacaccaagttccactgc
acacacaacatggcgttcatgataaagaaactccttgttagttatattgctctcatatgc
gtctatggcgtcatctctatatacacgctgttctggcttttccggagacctcttaaggag
tattcctttgaaaaagtcagagaggagagcagcttcagtgacattccggatgtcaagaat
gactttgcgttcctgctccacatggtggatcagtacgaccagctatattcaaagcgcttc
ggtgtgtttctctccgaggtgagtgagaacaaactgagggagatcagcctgaaccacgag
tggacttttgagaagttgtggcagcatgtgacgcgcaatattcaagagaagttggagctc
cacctgttcatgctctccggagtgccagaggctgtgtttgatctcactgatctggaaatc
cttaaattggaattgatcccagaggccaggataacagctaagatctcacaaatgacaaac
ctccaagagctgcacttctatcactgtccggccaaagtggaacagactgctttcattttc
cttcgtgatcacctccggtgccttcatgtcaaatttacagacgtcgctgagatccctagc
tgggtctacttgttgaagaacttacgggaactgtacttggttggtaacctgaactctgaa
aacaacaaaatgattggactcgagtctttgcgggacctcaggcacttgaaggttctgcac
ctcaaaagcaacctcacaaaggtcccgacaaacataacggatctgtctccgcatctcatc
aagctggtcattcacaacgacggcacaaagctcttagttctgaacagcttgaagaaaatg
ttgaatctcgccgaactggagcttctgaactgtgagttggagcgcatcccccatgctatc
ttcagtttgaacaaccttcaggaactggacctgaaatccaacaacattcgtaccatagag
gagatcatcagcttccagcacctcaagagacttacgagcctcaaactttggcacaacaag
atcatttccattccagtgtcaattagtcatgtgaaaaatcttgagtcgctctatctctca
cacaacaagctggagtctctcccctcatcgttgtttacccttctgaagttacggtacctc
gatgtcagccacaactccatagtggtgatacccctggaggctggctttctgcagaacctc
caatattttgccattacaggcaacaaagtcgaggtggttcccaagcaactgttcaagtgc
aacaaactgaggaccttgtgtgtcgggcacaactgcatctctaccattccggagaaaatt
ggtcagctctcacagctgacacacctggaactgaagggaaactgtctggatcgtctcccg
gcccagctcggtcagtgcgggctcctgcgccggtgctgcctgatagtggaggatcatctc
tttgactcgctccccatggaggccaaagagagcatcaatcaggagtctggtgtttctttt
ccaaacggttgcaagtgtctcagtgatggacggtaa
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