Pungitius pungitius (ninespine stickleback): 119216534
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Entry
119216534 CDS
T07626
Name
(RefSeq) tripartite motif-containing protein 3-like
KO
K11997
tripartite motif-containing protein 2/3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119216534
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119216534
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
SGL
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
TEN_NHL
zf-RING_2
zf-RING_5
Invasin_D3
zf-C3HC4_4
CRLF3_N
RING_XB3-XBAT31
zf-ANAPC11
FTR1_4HB
FapA
Prok-RING_4
Baculo_PEP_C
Mala_s_1-like
Histidinol_dh
Beta-prop_IFT122_1st
DUF7822
DUF8567
TolA_bind_tri
ATP-synt_B
DUF7605
OEP
Motif
Other DBs
NCBI-GeneID:
119216534
NCBI-ProteinID:
XP_037325369
LinkDB
All DBs
Position
3:complement(13854499..13868223)
Genome browser
AA seq
771 aa
AA seq
DB search
MSLTMAKRETGSTSPVVRQIDKQFLVCSICLDHYHNPKVLPCLHTFCEKCLQNYIPPQSL
TLSCPVCRQTSILPEKGVAALQNNFFITNLMEVLQRDPECSRPEACNVLESASAATACQP
LSCPNHEGKVMEFYCESCETAMCLECTEGEHREHVTVPLRDVLEQHKSALKNQLDAVRNR
LPQLTAAIELVNEISKQLTERKNEAVTEISSTFDELEKALHQRKTALITEVENICSTKQK
VLQAQLTSLLQGKENIQSSCNFTEQALSHGSATEVLLVQKQMGERVSALARHTFPEHPHE
NGHLECQVETDGLRRSIQNLGVLITTGTVGHTSVATGEGLRHTLVGQHTSVTVTTKDKDG
ELVKTGNAALRAEIVSADGVCTEAEVVDNKNGTYEVGYTMRSEGEFTFSLLLYEQPVRGS
PFRLRAVKPSDVLQSPDDVKRRVKSPSGGGGHVRQKAVRRPSSMYSTTKKKENPIEDELI
YRVGTRGRDKGEFTNLQGISTSSNGRIVVADSNNQCIQVFSNDGLFKMRFGVRGRSPGQL
QRPTGVTVDVNGDIIVADYDNRWISIFSSDGKFKSKIGAGRLMGPKGVAVDKNGHIITVD
NKACCVFIFQSNGKLVTKFGARGTSDRHFAEKGGANIALEQKLSKSGPVFSPHFVAVNNK
NEIVVTDFHNHSVKVYNADGEFLFKFGSHGEGNGQFNAPTGVAVDANGNIIVADWGNSRI
QVFDSSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYRYLQ
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcacgatggctaagcgtgagaccggcagcaccagccctgtggtcaggcagata
gacaagcagttcctggtctgcagcatttgtttggatcactatcacaaccccaaggtcctg
ccctgcctacacaccttctgcgagaaatgccttcagaactacatccccccgcagtcattg
acgctctcctgtccagtctgcagacagacctccatcttgccagagaagggtgtggcagcc
ctgcagaacaatttcttcatcacaaacctaatggaggtgttacagcgagacccggagtgt
agccgacctgaggcctgtaatgttctggagtcagccagtgcagctacggcctgtcagccg
ctctcttgccccaaccatgagggcaaggtgatggagttttactgcgagtcatgtgaaacc
gccatgtgtctggagtgtacagaaggagaacacagggaacatgtgaccgttcctctgagg
gacgtgctggaacagcacaagtcggcgctaaaaaatcagctggatgctgtgcgcaacaga
ctacctcagctgactgctgcaattgagctggtgaacgagatctccaagcagcttacagag
cggaaaaacgaggcagtgactgaaatcagtagcactttcgacgagctggagaaggctttg
caccaacgcaagaccgcgcttatcactgaggttgagaacatctgcagcactaagcagaag
gtgctccaagcccagctgacctctttgcttcagggcaaagagaacattcaaagcagctgt
aatttcacagagcaggccctgagccacggcagcgccactgaggtcctgctggtccagaag
cagatgggtgagcgggtcagtgcgctggcacggcacacctttcccgagcatccccatgaa
aacggacatctggagtgccaggtggagaccgacggacttaggcgctccattcagaacctg
ggagtcctgatcacaacggggaccgtaggccacaccagtgtcgccaccggcgaaggtctg
cggcacacgctggtcggccagcacacctctgtcacagtcaccacgaaagacaaggacgga
gaactggtgaagaccggcaacgcggcgctgagggcggagattgtctctgccgacggagtg
tgcactgaagctgaggtggtggacaacaagaacggcacgtacgaagtcggttacaccatg
cgctccgagggagagttcaccttctctctgctgctgtacgagcagccggtgagggggagt
ccgttccgactgcgcgccgtcaagccgtcagacgtcctgcagtcgccggacgacgtgaag
aggagagtgaaatctccgagtggaggaggaggtcatgttcgacagaaggctgtgcgcaga
ccctccagcatgtacagcaccaccaagaaaaaagaaaacccgatcgaggacgagctgatc
tacagagtgggaacgagagggcgagataagggagagttcactaacctacaaggcatctcc
acctccagtaacggacggattgtggtggcagacagcaacaaccagtgtatacaggtattc
tcaaacgatggcctatttaagatgcggtttggggtcagaggtcgttcgccagggcagttg
cagaggcccacgggggtcacggtggacgtgaatggcgacataattgttgctgattacgat
aaccggtggatcagcatcttctcctcggatggcaagttcaagagcaaaatcggagcaggg
agactgatgggaccgaaaggtgtggccgtggataagaatggacatatcatcacggtagat
aataaggcctgctgcgtcttcatcttccaatcaaacgggaagttggtgacaaagttcgga
gccagaggaacatcagacagacactttgcagaaaaaggtggtgcaaacatcgcactggaa
caaaagctcagtaaatctggccctgttttcagtcctcactttgtggccgtaaataacaaa
aatgaaattgtggtaacagactttcataaccattcagtaaaggtgtacaatgcagatggg
gagttcctctttaaattcggctcccatggagaagggaacggccagttcaacgctccaaca
ggcgttgctgtggatgccaacggaaatatcattgttgctgactggggcaacagtcgtatc
caggtgttcgacagctcagggtccttcctgtcctatatcaacacatcagcggaccccctc
tacggccctcaggggctggccctcacatccgatggtcatgtggtggtggcggactctggg
aaccactgcttcaaagtctaccgctacctgcagtag
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