Pungitius pungitius (ninespine stickleback): 119216574
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Entry
119216574 CDS
T07626
Symbol
zyg11
Name
(RefSeq) protein zyg-11 homolog isoform X1
KO
K10350
Zyg-11 protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119216574 (zyg11)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
119216574 (zyg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
LRR_4
ELMO_ARM
LRR_At5g56370
BAF250_C
Motif
Other DBs
NCBI-GeneID:
119216574
NCBI-ProteinID:
XP_062419378
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All DBs
Position
7:21710972..21715490
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AA seq
749 aa
AA seq
DB search
MACSFLNTDDASPPALTDLCLSHVSVNLEWFCVKLPDGSWCFREAVLFPQELADQLLAKM
ATEGLLNDSTVGVFRNSEYLRLRRACIRTARISAEAFQKALCSHRLLELDAARVNADLTI
PDILQGLATNKYCQKSLQRLVLSGLTMSSLEEPARHRFGLLRGLRSLSLANVDFYDSGLA
DVCSLPQLESLDLSNTSVTNLSPLLGLKERLRSLTLHQLKRLEMSTTQLLGVIGQLDVLQ
HLDISDDKQFTSDVARQLLGQRGILPALVSLDVSGRKQVTDAAVKAFVEERPGMTFVGLL
ATDAGFSDFLSGEGTLKVTGEAYETQICEALRRYSEREGFVREALFHLFSLTHVMEKHRP
DILKLVVVGMKNHPSTLNVQLAASACVFNLTKQDLAAGMPVRLLSTVTELLLEAMRTFPN
HQQLQKNCLLSLCSDRILQEVPFNRFEAAKLVMQWLCNHEDQNMQRMAVAIISILAAKLS
TEQTAQLGAELFIVKQLLHIVRQKATQGVVDATLKFTLSALWNLTDESPTTCRHFIENQG
LDLFIQVLESFPSESSIQQKVLGLLNNIAEVGELHVELMVQGFLDHISTLLHSPEVEVSY
FAAGILAHLTSRGEGAWALSAELRSSLLEQLHDVIMKWPGPECEMVAYRSFNPFFPLLEC
FHTPGVQLWAAWAMQHVCSKNAARYCSMLLEEGGLQQLELVHTHPQTHRDVRLLARGILD
SLQRHRARTGQPAPPPQVSTCDDHGTGSE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtagtttcctaaacacggatgacgcgtccccgccggctctgaccgacctgtgt
ctgagccacgtgagtgtgaacctggagtggttctgcgtgaagctccctgacgggtcctgg
tgcttccgggaggccgtgctgttcccccaggagctggcagaccagctgctggccaagatg
gccactgaaggtctgctgaacgacagcaccgtgggggtgtttcggaacagcgagtacctg
cggctgaggcgcgcctgcatccgtacggcacgcatctcggcggaggccttccagaaggcc
ctctgctcccaccggctgctggagctggacgccgccagggtcaacgcagacctcaccatt
cctgatatcctacaggggctggccaccaacaagtactgccagaagtccctccagcgactc
gtcctgagcggcctcactatgtcctctctggaggaaccggcccggcaccgcttcggcctc
ctgcgggggctccgctcgctctccctggccaacgtggacttctacgactctgggctggca
gacgtgtgctcgctgcctcagctggagagcctggacctctccaacacctcggtgaccaac
ctgagccccctgctgggcctcaaggagcgactgcgctcgctcactctgcaccagctcaag
aggctggagatgagcacgactcagctgctgggggtcatcggccagctggacgtgctgcag
cacctggacatcagcgatgacaagcagttcacctccgacgtggctcgtcagctgcttgga
cagcgagggatcctgcccgctctggtttccctggatgtgtcggggaggaagcaggtcaca
gacgcggctgtcaaggcgtttgtggaggagagaccggggatgacctttgtgggactactg
gccacagatgctggattttctgacttcctctcaggagaaggaaccctgaaggtgacagga
gaagcctacgagacccagatctgtgaggccctgcggcgctacagcgagcgggaaggtttc
gtgagagaagctctgtttcacctgttcagcctgacccacgtcatggagaagcaccggccc
gacatcctcaagctggtcgtcgtggggatgaagaaccatccctccaccctgaacgtgcag
ctggcagcgagcgcctgtgtgtttaacctcaccaaacaggacctggcggcggggatgccg
gtgcgcctgttgagcaccgtcacggagctgctgctggaggccatgaggacgttccccaac
caccagcagctgcagaagaactgtctgctgtctctgtgcagcgaccgcattctgcaggag
gttccattcaacaggtttgaagctgctaaactagtgatgcagtggctgtgcaaccacgag
gaccagaacatgcagaggatggccgtggccatcatctccatcctggctgctaagctgtcc
acagagcagacggctcagctgggcgcagagctcttcatagtgaagcaactgctccacatt
gtgcgtcagaaggccactcagggggtcgtggacgccaccctcaagttcacgctgagcgcc
ctgtggaacctgaccgacgagtcgccgacgacctgccgccacttcatcgagaaccagggc
ctggacctgttcatccaggtgctggagtccttccccagcgagtcgtccatccagcagaag
gtgctcgggctgctgaacaacatcgcggaggtgggggagcttcacgtggagctgatggtg
cagggcttcctggaccacatcagcaccctgctgcacagcccagaggtggaggtcagctac
ttcgctgccggcatcctggcacacctgacgtcccgaggggagggggcctgggctctgagc
gccgagctccgctcctcactgctggagcagctgcatgatgtcatcatgaagtggccgggg
cccgagtgtgaaatggtggcctacaggtccttcaaccccttcttccccctgctggagtgc
ttccacacccctggtgtccagctgtgggcggcctgggccatgcagcatgtgtgtagcaag
aacgccgctcggtactgcagcatgctgctggaggagggcggcctgcagcagctggagctg
gtccacacccacccgcagacccacagagacgtccggctgctggcccgcggcatcctggac
agtctgcagcgccacagagcccgcacggggcagcccgccccccccccacaggtaagcaca
tgtgacgatcatgggacaggcagcgagtag
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