Pungitius pungitius (ninespine stickleback): 119216592
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Entry
119216592 CDS
T07626
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2
KO
K20655
Rho GTPase-activating protein SYDE
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119216592 (syde2)
Membrane trafficking [BR:
ppug04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
119216592 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
C2
HAM1_N
Motif
Other DBs
NCBI-GeneID:
119216592
NCBI-ProteinID:
XP_062419459
LinkDB
All DBs
Position
7:2385619..2420473
Genome browser
AA seq
1687 aa
AA seq
DB search
MADPLRRTLLAKLRGKKSKKGATVGGGYSSAAADGGREGKEKVLQTQVDSDEARPAVWLA
GLDRVTERMSTYENCVDGATVHAEAVVLVRESRRGEASGARPQERSSGGRAGVNEQLPGV
SLQRDARFAGSRRGPASPEKRALSAGIPLGGPRAQRRHYGSEPWQCSVGDSIGFGGNSNR
VLHRAQVEPRAALGGAPERRVTGGTEPVDRHMAGCAAAAAAGGERNANRTGDDNQTSEAN
SLVRAELVRPSSSEENIVIRSVESYGPEDAGDHRGPAGGVQSPTFFPTELEICDLNMASL
CATQGSLRYALDSEDEDYYDNEILPFYETIRAQSDGDRDVAELPQDNEQLDVSNSAQETD
RLRNRLKEAYYLLINAMNDINLDVQQMSGGALTEQGATSSCSSHSRDSLCSRLSAKNMDS
DSWSSGGDNSPQQVSDNDSLLLCLGGALESGLTGRLTSKSMVTLSLTERRPTLRRSASDG
AVRRAGGPSLCIQDPKSLDASGDRGPTEAKDAAWAEASGSGEPSGSLVLCSTSSSGELLL
LVDAGGDGDRGGQRGGSSGSVNSLTGSSDSNADASTDRGRANRREPSDVRAPGARSANKG
HGVTVNKMQEWMHRGRLLSSEMKQRIEGSASPRGGGRSQDRPCPQGNLGMSKAGGQTSNR
GVKCVPAKSPQRQQPAFIENVQTPCANGREVGRPSESSPRRPPLTTITVSKKRNWLQQSS
LGKNHCAKDELLGTLGAEEEGSPPSPSPDHLRPSARPACLQLPQITVGQAKVSPQPRGVD
PAEENDADDEGEIWYNPIPEDDEPEASQRACLRLRVPPGAEARRRPSGRGGDADRGGSRR
PESPGESPGGGSGEGGQGNAAHSTEAPHPHRAPLACRAQEEGGPSASRATDCADLPNAVS
SPPSSPSPAKKSSSINWSFPDKIKSPRTVRKLSMKMKKLPELSRKLSIKGTPSGHAEPRA
PSLRSDARGLEVVPYSSAPARLAASGGGQASRNVISRYHLDSSVSTPHGFSKKKSGGGGS
KSASKGGYLSDGDSPELVAKSGKHGPAEGKAGRGRETDGGGGSAKVNGTELDIDAFRHYS
FTEQPKCSQFISGLMSLHFYGAEDLKPPRVDSRDVYCAIQVDSVNKARTALLTCRTAFLD
MDHTFNIELENAQHLKLVVFSWEPMPRRNRVCCHGTVVLPALFRVTRCHQLAVKLEPRGV
IYVKLGLMEQWQNSLDGGPGGDREPRVFGVEAWRVVERENTGLMVPLLISKCIDEIEKRG
CQVVGLYRLCGSAAVKKELREAFERDSCAVELCENTYPDVNVITGVLKDYLRELPYPLIT
KHLYEAVLEAMATRPLRMGAGACENDQADSEHTVRLLDNLPDVERMTLQKLLDHLKLVAS
CQEANKMTCQNLAVCFGPVLLSQRQDASCHTNRVFIDSEELASALHFKKHIEVLHYLLQL
WPVVDPHGRSSSQPPAASAGLLSAPPLRRRKERPQVLNLSEAEMAGVLRPKPGRLDSPSN
RYAGDWSGCGESYFPCEIPPPPNNNEEADYDDVPSEDTEAAGEGQAKPEEAEGGNGQMVT
GPASDPAEQEQPQTEQLEKDEENEEENEEEEEEEVEEEEGEEEEEKEVKSNPGDGEPLED
KEEERMCEHILPPCLPKEHTYQAYMKIQEISPVLSNRVNLRDLQESIDTLIGNLERELNK
NTLNVGY
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgcggaggactttactagcgaaactccgggggaagaaatccaagaaa
ggagcgactgtcggcggcggatacagctctgcggcggcggatgggggccgagaaggtaaa
gaaaaagttttgcaaacgcaggtcgactccgacgaggctcgcccggcggtctggctcgcg
gggctggatcgcgtgacggagagaatgagcacgtacgagaattgtgttgacggggcgacg
gtgcacgcagaggcggtcgttctggtccgggagagccgccgcggagaggcgtccggcgcg
cgtccccaggagcggagcagcgggggcagggccggggttaacgagcagctcccgggggtg
tcgcttcaaagagacgcgcgcttcgcggggagccgccgggggcccgcgtcccctgaaaaa
cgtgcgttatctgcggggatcccgctcggggggccgcgtgcccagaggaggcactacggc
tcggagccgtggcagtgcagcgtcggggattcgatcggcttcggggggaattcaaaccgc
gttctgcaccgcgcgcaggtggagccgcgtgccgcgctcggtggagccccagagcgccgg
gttaccggagggacggagcccgtcgaccggcacatggcaggctgcgcggcggcggcggcg
gctggcggcgaacgcaacgccaaccggaccggggacgacaatcagacttcggaggcgaac
tcgctcgttcgcgccgaacttgtgcgcccaagcagctcggaggaaaacatcgtgatcaga
agcgttgagagttacgggcccgaggacgccggggaccacagagggcccgcgggcggtgtg
cagagcccgaccttcttcccaacagagttagaaatatgcgacctaaacatggcatccctg
tgcgccacgcaggggtcactgagatacgctttagatagtgaggatgaggattactatgat
aacgaaatactgccgttctatgaaacgatcagagctcaaagtgatggcgacagagacgtc
gcagagctgccgcaggacaacgaacagcttgatgttagtaacagtgctcaggaaacagac
cggctcaggaaccggctgaaagaagcgtattaccttcttatcaatgctatgaatgatatc
aacctggacgtccaacagatgagtggtggtgctttaactgagcaaggcgccacctcctcc
tgcagtagccactccagggatagcctgtgctccaggttgtccgccaagaacatggacagt
gactcctggtcgtcaggaggcgacaacagcccccaacaggtgtcggacaacgactcgctc
ctactttgcctcggcggggccctggaatcaggcctcacgggcaggctgaccagtaagagc
atggtgaccctgtccttgaccgagagaagacccacattgcggcgctccgctagtgacgga
gctgtccggcgtgcaggtggaccctcactctgtattcaggaccccaaaagtctagacgcc
agtggcgatagagggcccacggaggcaaaagacgcggcgtgggccgaggcctcggggtcg
ggggagccctcaggatctctggtgctctgcagcaccagcagcagcggcgagctgctgctg
ctggtggacgccggcggggacggagaccgcggcgggcagcggggcgggagcagcggctcc
gtcaacagcctcacgggttcctcggacagcaacgcggatgcatcgaccgatcggggtcga
gccaaccgccgggagccgtctgacgtccgggcgccgggagcccgatccgccaacaagggg
cacggcgtcaccgtcaacaagatgcaagagtggatgcaccggggccgcctgttgtcctcc
gagatgaagcaacgcatcgagggctcggcgtcgccccgcggcggaggccggagccaggac
aggccctgccctcagggtaacctcggcatgtctaaagccgggggccagacatccaaccga
ggggtcaaatgtgtcccggccaaatccccacagcgccagcagccagctttcattgagaat
gtccaaaccccatgtgccaatggccgcgaggtgggcaggcccagtgagtcgtcgccacgg
cgaccaccgctcaccaccatcacggtctccaagaagcgcaactggctgcagcagagctcc
ctcgggaagaaccactgcgccaaggacgagctgctgggaacgctgggagctgaggaggag
ggctcccctcccagtccctccccggaccacttgagaccttcagcccggccggcctgcctg
cagctgcctcagatcaccgttggtcaggccaaggtttcccctcagcctcggggcgtggac
ccggcggaggagaacgacgcggacgacgagggggagatctggtacaacccgatcccagag
gacgacgagccggaggcgtctcagcgagcctgcctccggctgcgggttccacccggtgca
gaggcccgccggaggcccagcggcagggggggggacgcggatcgcggcggatcgcggcgg
ccggagtcgcccggggaaagccccgggggcggttctggggaggggggtcagggcaacgcg
gcgcattccacagaggcaccgcatccgcacagggcgccgctggcgtgcagagcgcaggag
gagggggggccgtccgccagcagagccacagactgtgccgacctgcccaatgctgtcagc
tcccctccctccagcccgagcccagccaagaaaagcagctccatcaactggtccttccca
gacaagatcaagtccccgcgcaccgtcaggaagctctccatgaagatgaagaaactcccc
gagctcagccgcaaactcagcatcaaggggaccccgagcggccacgcggagcccagggcc
ccttccctccggagcgacgcgcgcggcctggaggtcgtcccctattcctcggcccccgcc
aggttggccgcgtctgggggcgggcaggccagccgcaacgtgatctcccgctaccacctg
gacagcagcgtgtccacgccgcacggcttcagcaagaagaagagcggcggcggcggctca
aagtccgccagcaaaggcggctacctgagtgacggggactcaccggagctcgtggccaag
tccgggaagcacggcccggccgaggggaaggccgggaggggcagggagacggacggggga
ggcggaagcgccaaagtcaacggcacggagctggacatcgacgccttccgccattacagc
ttcacagagcagcccaagtgcagccagttcatctccggcctgatgagcctgcacttttac
ggcgccgaggacctcaaacccccgcgcgtcgactccagggacgtctactgcgccatccag
gtggactcggttaacaaggcgcgaaccgccctgctcacgtgtcggaccgccttcctcgat
atggaccacacgttcaacatcgagctggagaacgcccagcacctgaagctggtggtgttc
agctgggagccgatgccgaggcgcaaccgcgtctgctgccacggcaccgtggtcctgccc
gcgctcttccgggtgacgcggtgccaccagctggcggtgaagctggagccgcggggcgtg
atctacgtcaagctgggcctgatggagcagtggcagaactcgctggacggcgggccgggc
ggggacagggagccgcgcgtgtttggcgtggaggcgtggcgggtggtggagcgggagaac
acggggctgatggtgccgctgcttatcagcaagtgcatcgacgagatcgagaagagaggc
tgtcaggtggtggggctttaccgtctctgtggatctgcggccgtgaagaaggagctgcgc
gaggccttcgagagggacagctgcgccgtggagctgtgtgagaacacgtatccagacgtc
aacgtcatcacaggggtcctgaaggactacttgcgggagctgccgtaccccctgatcacc
aagcacctgtacgaggccgtgctggaggccatggccaccaggcctctgcggatgggagcc
ggggcctgcgagaacgaccaggccgactcggagcacaccgtcagactgctggacaacctg
ccggacgtggagaggatgacgctgcagaagctccttgaccacctgaagctagtagcgtcc
tgccaggaagcgaacaagatgacgtgccagaacctggcggtgtgtttcgggccggtgctg
ctcagccagcgtcaggatgcgtcctgccacaccaaccgggtcttcatcgactcggaggag
ctggccagcgcgctgcacttcaagaagcacatcgaagtcctgcactacctgctgcagctc
tggcctgtcgtggacccacacggccggtcctcctctcagccccctgcggcctcagccggc
ctcctgtcggctcctcccctgcggcgcaggaaagagcggccccaggtcctgaacctctcc
gaggcggagatggcgggcgtcctgcggcccaaaccggggcgcctggacagccccagcaac
cgctacgccggcgactggagcggctgcggcgagagctacttcccttgtgaaattccgccg
cctcccaacaacaacgaggaggcggactacgacgacgtgccctccgaggacacggaggca
gcgggggagggacaggcgaagcccgaggaagcggagggaggtaacggccagatggtcacg
ggccctgcgtccgatcctgccgagcaggagcagcctcagacagagcagttggagaaggac
gaggaaaatgaggaggaaaatgaggaggaggaggaggaggaagtagaagaagaggagggg
gaggaggaggaggagaaagaggtcaaaagtaatccaggcgatggggagccattagaggac
aaggaggaggagaggatgtgcgagcacatcctgcccccttgcctgcccaaagagcacacc
taccaggcttacatgaagatccaggagatcagccccgtgctgagcaacagggtcaacctc
agagacctgcaggagagcatcgacactctgataggaaacctggagagggagctcaacaag
aacacgctcaacgtcgggtactga
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integrated database retrieval system
