Pungitius pungitius (ninespine stickleback): 119216619
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Entry
119216619 CDS
T07626
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04010
MAPK signaling pathway
ppug04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119216619
04020 Calcium signaling pathway
119216619
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119216619
Ion channels [BR:
ppug04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119216619
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF6249
Motif
Other DBs
NCBI-GeneID:
119216619
NCBI-ProteinID:
XP_062419469
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All DBs
Position
7:7356143..7367097
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AA seq
1205 aa
AA seq
DB search
MPEVALTIQPHGGPDPGPEEQEQLPYPDLASVVLGCFKQTSRPRMRDIVSALLIIFPMLA
NVLCLYMFVVHIFGVIGVQLWAGRLHNRCFLGEDPIAMYNVSLSPYYVTKYGEFQSFLCS
PEDTSGQHCGEVPPYRQNHQTCSLAPPSVFGLTGAGTNACINWNVLYNVCRPGAQNPNNG
ATNFDNIAYAWISIFQVVTLEGWSNIMFYVMNVHSFWTLLFFIFVAIMGSFIMMNVCAVV
IATQFSDNLEHLRIQQTRREDSAVLVKWLRSKWNGCLAVIRRRASNRVRRHDDDSRTDDL
AVGGHIWGQLRTRLEKVVKSKIFNRLIMFAVLLSILTLAIEHHNQPNVLTTILHISDLTF
TVIFVVAMLLKLMALKWAYFEDRNNLFDFFIVIISVWETITKADSRLSVLRAFRLLRFGR
LLHYLPYLRTQLLVLKKAMEEAASLCMLILFVIFVFSLVGMHLFGHGLDTRKRINDRKNF
DTLLWSMVTVFQILTEENWNRVMYAIMAASSPWAFIYFVAVIVTGKHVLLNILVGIILKG
FQDRRTLSENHACVISSSTLEDGSANSNAENRTLGKNRASVTSSPTPEDGSADANGDEEN
RSQNRNQRALRWCKKREEWSFYVLSPQNKFRLFCKTVMSHDLFEYTVLLFILLNCITIAM
ERPGIEPGSKERMFLNISGHVFSAVFLVEMLFKVLTLGLFFGSESYCRSAWNVMDGSLVV
ASLVDIVVLLTPASHSKMLGIFKVLRLLRTLRPLRVVKRAPKLKLAVEALITALKPVGNI
LLVCCAFIFFYAILGLQLFKGKFYTCRGEYIEDITNKTDCLSANYRWVQKDFNFDSLPQA
LMSLFVMYSKDGWVSLMYDGLDAVGVDQQPVVNHNEWMLVFFISFMIVSFFLLDMFIGVM
VDTFRNCQKQQKLKLAEEARNRSQPGAGEERKETPYQASYSRWRLSIHTLCTSKQLDLFM
AVLIFLSVLVMAVEHYQQPLYIKRLTDYTHYVFTSILVIEVLLKLVAFGGLRFLRNSWNL
MDLVVVLVSIMSIVLNVMRVSRHLPINPTILRVFRVLRLAQVLKAKRIRVLLTTIIKTLS
QVGNICLLFLFFFSIYATLGVEFFGHLECEDDLCLGLNEHVNFKHFGMALFTLFLVCTGD
NWSVIMMDTLKQCRRGECADYLMWVSPLYFIAFVVIAQFVLANLVVAVIVQAMEDSNKKG
PHENC
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggtggcactcaccatacaacctcacggcggtcccgacccgggccccgaggag
caggagcagctgccgtacccggatctggcctcggtggtcttgggctgcttcaaacaaaca
tcaagaccccgtatgcgtgacattgtgtcagcgctcctgatcatcttccccatgctggct
aacgtgctctgcctctacatgtttgtcgtgcacatcttcggggtgataggggtccagctg
tgggcggggcgtctgcacaaccgctgcttccttggtgaagaccccattgcgatgtacaac
gtctccttgagcccgtactacgtcaccaagtacggtgagttccaatcgttcctctgttcc
cccgaagacacgagcggccagcactgcggcgaggtgccgccctacagacaaaaccaccaa
acctgctccttggccccgccgagtgtatttggcctcacgggggccggcactaacgcctgc
atcaactggaacgtgctctacaacgtctgtcggcccggggcccagaaccccaacaacggg
gccaccaactttgataacatcgcctacgcctggataagcatattccaggttgtcacactg
gaaggatggtcaaacatcatgttttatgtcatgaacgtgcattccttctggactttactc
tttttcatattcgttgccatcatgggctccttcatcatgatgaacgtgtgcgccgtcgtc
atcgccactcagttctcagacaacctggagcacttgaggatacagcaaaccaggagggag
gatagcgccgtgttggtcaaatggctccgctccaagtggaacggctgcctggcggtcatc
agacggcgtgcatccaacagggtgcgccgccatgacgacgacagcaggactgacgactta
gcggtcgggggtcacatttggggacagctcaggacgagactggagaaagttgtcaaaagt
aaaatcttcaaccggctgatcatgttcgctgttctcctcagcattctcaccctggccatt
gagcatcataatcagccaaacgtgttgaccaccattttgcacatcagtgacctcaccttc
accgtgatctttgtggtggcgatgctcttgaagctgatggcgctcaagtgggcgtacttt
gaggaccgaaacaacttgtttgactttttcattgtcatcatcagtgtttgggagacgata
acaaaagcagacagcaggttgtcggtcctccgagctttccgcctgctgaggtttgggagg
ctgctccactaccttccttacctaaggacacagctgctggtgctgaagaaggccatggag
gaggccgcttcgctctgcatgctcatcctttttgtcatctttgtttttagtcttgtgggc
atgcatcttttcggtcatgggttagacacccggaaaagaatcaatgacagaaagaacttt
gacacgctgctctggtccatggtcaccgtgttccagattctgacggaggagaactggaac
agggtgatgtacgccatcatggcggcctcctctccgtgggccttcatctactttgttgca
gtcatcgtgacgggaaagcacgtccttctcaacatcctcgtgggtattatccttaagggc
ttccaagacaggcgaacacttagcgagaaccatgcctgcgtgatctcttcttccaccctg
gaggacggttctgcaaacagcaatgcggaaaaccgaacacttggcaagaaccgtgcctct
gtgacctcttccccgacccctgaggacggctctgcagatgcaaacggcgatgaggaaaac
agatctcagaaccgaaaccagagggcgctgcgctggtgcaaaaagcgcgaagagtggtca
ttctacgtgttgtctccccagaacaagttccgcctcttttgcaagacggtgatgtctcac
gatttgttcgaatacacagttctgctcttcattctcctaaactgtatcaccattgcaatg
gagaggcctggaatagagcctggaagcaaggagcgtatgttcctgaacatctctggtcac
gtcttctctgcagtcttcttggtagagatgctttttaaggtcctgaccctcggcttgttc
tttgggagcgagagctactgccgctccgcctggaatgtcatggacgggtcgctggtggtc
gcctccttggtcgacatcgtcgtcttgctgacccctgcaagccacagcaaaatgctgggc
attttcaaagtgctgcgcctgctgcgcacacttcgcccgctgcgggtggtcaagcgtgcc
ccgaaactgaagctggcggtggaggctttgatcaccgccctcaagcccgtcgggaacatc
ttgcttgtttgctgcgccttcatctttttctacgccatcctcggcttgcagttgttcaag
gggaagttctacacctgtagaggcgagtacatcgaggacatcaccaacaagacggactgt
ctgtcggccaactaccgctgggtgcaaaaggatttcaactttgacagcttgccgcaggct
ctgatgtcgttgttcgtgatgtactccaaggatggctgggtgagcctcatgtacgacgga
ctggacgccgtcggagtcgaccaacagcccgtggtcaaccacaacgaatggatgctcgtt
ttcttcatctccttcatgatcgtgagcttcttcttgctcgacatgttcatcggtgtgatg
gtggacaccttccgcaactgccagaagcaacagaaactgaaactggctgaggaggcgaga
aaccgctcgcagcctggcgccggtgaggagcgtaaggagacgccgtaccaagcgtcctac
tcccgctggcgtctgtccatccacaccctgtgcaccagcaagcagctggacctcttcatg
gccgtcctgatcttcctcagtgttttggttatggccgtcgagcactaccaacaacctctg
tacatcaagaggcttacagattacacccactacgtgttcacctccatcctggtgattgaa
gtcctgctgaagctcgtggcgtttggcgggctgaggttcctgcgaaacagttggaacctc
atggaccttgtggtcgtcttggtttccatcatgagcatcgttttaaacgtgatgagggtg
tcacggcatcttcccataaatcccaccatcctgagagtcttcagagtgctgaggctggct
caagtcctgaaggccaaacggattcgtgtcctgctgacaacgatcatcaaaacgctgtcg
caggttggaaacatttgtctcctcttcttgttcttcttttccatctacgcaacgctggga
gtggagttctttggccatctagaatgcgaggacgacctgtgcctcggattaaacgagcac
gtcaacttcaagcacttcggcatggccctgttcaccctcttcctggtgtgcaccggggac
aactggagcgtgattatgatggacaccttgaagcagtgccgtcgtggagagtgtgcagac
tacctcatgtgggtatctccgctatacttcatcgcctttgtggtcatcgcccagttcgtg
ctcgccaaccttgttgtggccgtcatcgtgcaagctatggaggacagcaacaagaaagga
ccccacgaaaactgttga
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