Pungitius pungitius (ninespine stickleback): 119216629
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Entry
119216629 CDS
T07626
Symbol
dscamb
Name
(RefSeq) cell adhesion molecule DSCAM isoform X4
KO
K06767
Down syndrome cell adhesion molecule
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119216629 (dscamb)
Cell adhesion molecules [BR:
ppug04515
]
Immunoglobulin superfamily
DSCAM family
119216629 (dscamb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
C1-set
V-set_CD47
Sp38
fn3_2
C2-set_3
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
119216629
NCBI-ProteinID:
XP_037325586
LinkDB
All DBs
Position
3:complement(4473245..4561735)
Genome browser
AA seq
2068 aa
AA seq
DB search
MWILAFIFFQSILNVFSEDLHSSLYFVHASLQEVVFASTTGTSVPCPAGGAPLSSLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VSREPYTVRVADQKAMRGSVAVFKCIIPASVEAYVTVVSWEKDTVSLNSGQRYLITSTGA
LYILDVLPEDGLNNYRCTTRHRYTGETRQSNSARLIVSDPTNAEPGILDGFDQREVMINH
RVELPCKASGYPAPKYRWLKDNSPLEPDSRFRQTTTGLLIESTQPSDSGTYVCEVWNIYG
NAEVMGRLYVKQPLKAVVSPRKVKGSVGSKVSLSCSVSGSDEYELSWYRNGEIIYPGNNV
RFTGLNRENLIMEGMSKSDGGAYQCFARKAKMSAQDFVQVILEDGTPKILSSFSEKVVNP
NEPVFLVCNVKGTPPPRCSWSLDDDPVIKDAHHHLGHYETHEGHVVSQLNVTHTQVQDGG
VYRCTCSNSAGVVYHQARINVRGRANIRPMKNITAIAGGDAFVHCRVIGYPYYSIKWYKN
SALLPFNHRQRAFENNGTLKLSNVQQVDAGEYNCKVMVQPNKMDSQSVHLRVRVPPYIQP
FEFQRFTIGQRVFIPCVVMSGDRPLDITWQKDGRPIPVSLGVTVDNIDFTSSLRISNLTP
DHNGNYTCVARNEAAAVEHQSQLIVRVPPQFVVQPEDQDGIYGKTVTLNCSAEGYPPPTI
VWEHSKGAGVPQFQPIQLNSGSRVQLLSNGSLLIKHVLEDDSGFYLCKVSNDVGADVSKS
MYLTVKIPAMITSYPNTTLATQGEEKKMSCIAHGEKPIMVRWEKEERIINPETSRYVVTV
KEVADEVVSTLVIMPTVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPEVEIREVKDR
TIALRWTMGFDGNSPITGYDIECKNKSASWLSAQVTKDVSPQLNQATIIDLHPSSTYNIR
MVAKNIIGNSNPSNELTITTDEAAPDGPPQDVTLDPTSPQSIKVSWKPPQKHLQNGVIRG
FQVGYREYSPGGGHQFIIISLDTTGDATESIVLDNLKKFTQYSVVVQAANRAGTGPSSQQ
VVTKTLEDVPSRPPENVLAVAKSPEVISLSWMPLPREALNGNLQGYRVIYWANLPDGELG
EIRNVTTNQPSLELDGLEKYTNYSIQVLAFTNAGDGVRSEQIYVRTKEDVPGPPAGVKAA
ASSSSVVFVSWLPPLKLNGIIRKYIVFCSNLHPMVMSEFEASPDAYFYRIPNLARNRQYS
IWVVAVTAAGHGNNSEKITVEPLAKAPARILTFNGTVTTPWMKDIVLPCKAVGDPPPTIK
WLKGNTNGTPTPVLVDGRRSVHGNGSFIIRTVKAEDSGNYSCVAGNNWGSDEITLNLQVQ
VPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYR
LENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKDHELFTSINSTRARLNLV
GWNNGGCPITSFILEYRAVDSATWTTAQRTSLTKSYVLYDLQEATWYELQMKVTNSAGSA
EKRITFATLNADGSTIPPLLKTGDPVSDNMSGSGGLKMVVTITSVLVVAVLVFIMLMVLK
RRRREQRLKRLRDAKSLAEMLMSKNTRTPDTVNKQQQTLRMHIDIPRAQLLIEERDTMET
IDDRSTVLLTDNDFGETNKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTAK
AGPVAARSRYASQWTLNRPHPTSSSHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDR
ARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTNDYTD
SLTSSTPSESGICRFTASPPKPQDVSRVMTMAVPKAHRPGGELVHLPPYLRMDFLLNRGV
PLAARGGGVSSSSSSGGGGGGGGGAGGAGATGETRGVGGGGGAMGQTCLEPQRSRTLKRP
PPMEPTPMEVPSPREVQQWQPGTASTLPHRDARERGEARGEVRAEAPSSGDLAQAQAAKL
STSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcttttatcttcttccagagcatcttgaatgttttcagtgaggactta
cattccagcttatattttgtccatgcatctttgcaagaggtagtatttgccagcaccaca
gggacctctgtgccctgtcctgctggtggcgccccgctttcctcgctgcgctggtatctg
gcgaccggcgaggagatctacgatgtcccgggcatcagacacgtccatcccaatggaacg
ctccagatcttcaacttcctgccgtccagcttcagcaagctgatccatgacaacacgtac
tactgcactgccgagaacccctctggcaagatcaggagtcaggatgtccacatcaaagct
gtttcacgggaaccctacacagtcagagtggccgaccagaaggccatgagaggcagtgta
gccgtcttcaagtgcattatccctgcttcggttgaggcctacgtcactgttgtatcatgg
gagaaagacacagtttcactcaactcaggacaaagatatctcatcacatccacgggggcc
ttgtacattctggacgtgctgcctgaggatgggctgaataactaccgctgcaccacacgc
caccgctacaccggcgagacccggcagagcaacagcgcgcgcctcattgtgtcagacccc
accaatgctgagccaggcatcctggatggctttgaccagcgagaggtgatgatcaatcat
cgggtggagctgccctgtaaggcctcgggctacccggcgcccaagtaccgctggctgaag
gacaacagccccctggagcctgacagtcgctttcgccagaccaccacggggcttctgata
gagagcacgcagcccagtgactctgggacgtatgtttgtgaagtgtggaacatttacggc
aacgctgaggtgatggggcgcctgtatgtcaaacagcccttgaaggcggtggtcagccct
cgcaaggtgaaaggcagcgtgggtagcaaggtgtctctgtcttgcagcgtgagcggctca
gacgagtatgagctgtcgtggtaccgcaacggcgagatcatctaccccggcaacaacgtg
cgcttcaccgggctgaaccgggagaacctcatcatggagggcatgtcgaagagcgacggc
ggagcctatcagtgcttcgccaggaaggccaagatgtctgcacaggactttgtgcaagtc
atcctcgaagacggcacacccaagatcctgtcctccttcagcgagaaggtggtgaacccc
aacgagcccgtcttcctggtgtgcaacgtcaagggcacgccgcccccccggtgctcctgg
tcgctggacgacgaccccgtcatcaaagacgcgcaccaccacctgggccactacgagacc
cacgagggccacgtggtcagccagctgaacgtcacgcacacccaggtgcaggacggcggg
gtgtaccggtgcacgtgcagcaactcggccggggttgtgtaccaccaggctcgaataaac
gtaagaggtcgcgcaaacattcgcccaatgaaaaacatcacggcgatcgccgggggggac
gcgttcgtccactgccgcgtgatcggctacccttactactccatcaagtggtacaagaac
tcggcactgctcccgttcaaccaccgacagcgagccttcgagaacaacggcacgctgaag
ctgagcaacgtgcagcaggtggacgctggcgagtacaactgcaaggtgatggtccagccc
aacaagatggactcccagagcgtccatcttcgagtgagagtgcctccctacattcagccc
tttgagttccagcgattcaccatcggccaacgtgtcttcatcccctgcgtggtcatgtcg
ggtgaccgcccgctggacatcacctggcagaaagacggacggcccatccccgtcagcctg
ggcgtgaccgtggacaacatcgacttcaccagctcgttgagaatctccaacctcacgccc
gaccacaacggcaactacacctgcgtcgcccgcaacgaggctgctgcagtggagcaccag
agtcagctcattgttcgagttcctcctcagtttgtggttcagcccgaggaccaagatggg
atctatgggaaaactgtgactctgaactgctcagctgaaggctaccctccacccaccatc
gtatgggagcactccaaaggcgccggcgttccccagtttcagcccatccagctgaacagc
ggatctcgcgtgcagctgctgagcaacggctcgctgctgatcaaacacgtgctggaagac
gacagcggcttctacctgtgtaaggtcagcaacgacgtgggagccgatgtcagcaagtcc
atgtacctcaccgtgaaaatcccggccatgatcacctcctaccccaacaccacgctggcc
acgcagggcgaggagaagaagatgagctgcatcgctcacggggagaaacccatcatggtg
cgctgggagaaagaagaacgcatcatcaacccggagaccagccgctacgtggtcaccgtc
aaggaggtggccgacgaagtcgtctcgacgctcgtgattatgccaaccgtgcgtgaggac
tctggtttcttctcctgtcacgccatcaactccttcggcgaggaccgaggcatcatacag
ctgacggtgcaagaaccacccgaccctccagaggtggagatccgcgaggtgaaagatcgg
accatagccctccgctggaccatgggctttgacggcaacagccccatcacaggatatgat
atcgaatgcaagaacaaatcagcctcgtggctatcagcccaggtgaccaaagacgtgtca
ccgcagctcaaccaggccacaattattgacctccacccttcctccacctacaacatccgc
atggtcgccaagaacatcatcggcaacagcaaccctagcaacgagctcaccatcaccact
gatgaagcagctcctgacggcccgccgcaggatgtcactctggatcccacctccccacag
agcatcaaagtgtcctggaagcctcctcagaagcacctgcagaacggtgtgatccgcggc
ttccaggtgggctacagggagtatagccctggtggaggccaccagttcatcatcatcagc
ctggacaccacaggagacgccacggagagcatcgtgctggacaacctgaagaagttcact
cagtacagcgtggtggtgcaggctgccaacagggccggcaccgggccgtcctcacagcaa
gtcgtcaccaaaaccctggaggatgtgccgtcccggccaccggaaaacgtcctggctgtg
gcgaagtcccccgaggtcatctcgctctcctggatgcctctacccagagaggctctcaat
ggaaacctgcagggatacagagtcatctactgggccaacctgcccgacggagaactggga
gaaatccggaatgtgaccaccaaccagccgtctctggagctggacggattggagaagtac
accaattacagcatccaggtcttagccttcaccaacgccggagacggggtccgcagtgaa
cagatctacgttcgcactaaagaggacgttcctggtcctcctgcgggggtgaaggctgcc
gcatccagcagctctgtggtgtttgtctcctggcttcctcccctcaaactcaacggcatc
atcaggaaatacatcgtcttctgctctaacctgcatcccatggtgatgagcgagtttgag
gcgtctccggatgcgtatttctacaggatccccaacctggctcgaaacaggcagtacagt
atctgggtggtggctgtgacggctgccggacacggcaacaacagtgagaagatcacagtg
gagcctctggccaaagctccggccaggattctgacgttcaatggaacggtgaccactccc
tggatgaaggacatcgttttgccgtgcaaggctgtcggagaccctcctcccaccatcaag
tggctcaagggaaacaccaatggaacccccacacccgtccttgtggacgggcggcgcagc
gtccatggcaacggcagcttcatcatccgcacggtgaaagcagaggattctgggaactac
agctgtgtggccggcaacaactgggggtcggatgagatcacgctgaacctgcaggtccaa
gtccctcctgatcagccgcgcctcacagttaccaagacaaccaccacatcaatcacattg
tcatggatacctggagacaacggagggagctccatcagaggttacatcctgcagtactca
gaggacaacagtgagcagtggggcagttttcccatcagccccagcgagcgctcctaccgc
ttggagaatctgaagtgcggcacctggtacaaattcactctgacggcccagaatgcagtg
gggccggggcgcatcagtgagatcattgaagccaagacccacgggaaagagccgcagttt
gccaaagatcacgaactcttcaccagcatcaactccaccagggccaggctcaacctggtc
ggctggaacaacggcggctgtccgatcacctccttcatactggagtaccgagcggtggac
tcggccacctggaccaccgcccagcgcacgtcgctgaccaagagctacgtcctgtacgac
ttgcaggaggccacctggtacgaactgcagatgaaggtcaccaacagcgccggctcggcg
gaaaagaggatcaccttcgccactctcaatgcagacggaagtaccatccctcccctgctg
aaaaccggagaccccgtctcggacaacatgtccggcagcggaggtctgaagatggtggtg
accatcacctccgtcctggtggtggccgtcctggtcttcatcatgctcatggtgctgaag
aggagacggagagagcagaggctcaagagactccgagatgccaaaagcctggcagaaatg
ctgatgagtaagaacacgcggactccagacacggtgaacaagcagcagcagacactcaga
atgcacatcgacatccccagagcccagctgctcatcgaggagagggacaccatggagacg
atcgatgacaggtccaccgtgctgttgacagacaacgacttcggggagacgaataagcaa
aagtcctccacagtgacccacacagtccactaccagtctctgtcccaggccactggacca
ctggtggacgtgtccgacgccaggcctggaaccaatcccactgccagacgcactgccaaa
gcgggtcccgtggcggcacgcagccgctacgccagccagtggaccctcaaccggccccac
cccaccagctcctcgcacacgctgaccacggactggaggctgcccacgccgcgcgccacc
ggatccgtggacaaggagagcgacagctacagcgtcagcccctctcaggatacagatcgc
gcgcggagcagcatggtgtcgacggagagcgcgtcctccacctacgaggagctggccagg
gcctacgagcacgccaagatggaggagcagctccgccacgccaagttcaccatcaccgag
tgcttcatttccgacacgtcgtcggagcagatgacggcagggaccaacgactacaccgac
agcctgacctccagcacgccgtccgagtcgggcatctgccgcttcaccgcctcgccgccc
aaacctcaggatgtcagtcgggtcatgaccatggcggtgcccaaggcacacagacctgga
ggagagctggtccacttgccgccttacctacgcatggacttcctgttgaatcgcggcgtg
ccactggcggcccgaggcggaggggtcagcagcagcagcagcagtggaggaggaggagga
ggaggaggaggtgcaggtggagctggtgctacgggggagacaagaggagtgggtggagga
ggaggagccatgggccagacctgcctggagccccagaggagccgtacactgaagaggccc
ccccccatggagcccacccccatggaagtgccgtcacccagggaggtgcagcagtggcag
ccggggactgcctccaccctcccccacagggatgcccgggagaggggggaggcccggggg
gaggtccgggcagaggccccctcctcgggagacctcgctcaagcacaggctgccaagctc
agcacctcccaggagtccctgctggactccagaggacacctgaaacaaagcaacaacccc
tatgccaagtcttacactctggtataa
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