Pungitius pungitius (ninespine stickleback): 119216647
Help
Entry
119216647 CDS
T07626
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119216647 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119216647 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
ppug04131
]
119216647 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119216647 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119216647 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119216647 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
119216647 (si:dkey-110c1.10)
Membrane trafficking [BR:
ppug04131
]
Others
Actin-binding proteins
Myosins
119216647 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119216647 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
119216647 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
119216647
NCBI-ProteinID:
XP_062419496
LinkDB
All DBs
Position
7:18939483..18950810
Genome browser
AA seq
1661 aa
AA seq
DB search
MTSLDLYSKGASVWIPDADAVWVSGLLLRDYSPAEKHLLLELSDGREARYPVGSPADLPP
LGNPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVAINPYDQLPIYGQ
EVIDAYSGQDAADMEPHIFSVAEEAYRTMTREENNQSIIISGESGSGKTVSAKFTMRYFA
VVGGASQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRRGDIIGANMRT
YLLEKSRVVFQAPAERNYHIFYQLCASRDLPEMRALKLDAPERFRYTSRGGEMQIPGTDD
LLDLERTCTAFTVLGVQPDQQMELFRILSAVLHLGNVDIQASGRTSERSYIDAGDRPLAL
FSKLLGVEGPQVAHWLCHRRLAVGGETLVKPVSGPQAREARDALAKHVYGRLFGWTVRRL
NAGLRARRGGEPAASFIGVLDIYGFETFERNSFEQFCINYANEKLQQQFNRHVFHLEQEE
YVREELSWSRIEFSDNQQCIDLLEGQLGVFDLLDEECRMPKGSDESWVLKLCDQHLSSKR
HPHFQKPRVLNGAFVIVHFADTVRYEGDGFLAKNRDTVFEELVNILRASQSELVAELFQP
QGDASSVADGSVRPGKRAPREHKLTVGFQFRRSLQMLMDALNATSPHYVRCIKPNDLKAA
FTFDPRRTVQQLRACGVLETIRISAAGFPSRWTYEEFFSRYRLLLGGLPGREHARASCRR
ALPRLIGDPDQYCFGKTKVFFRAGQVALLERLRGERLRAASVVIQSRVRGWLARVAHSRV
RRATVAIQRYCRGAAARRLASTLRYTKAALVIQKTLRMVLVRQMFLMIRQAAVTIQAFTR
GALARFRYRRLVAERAAVSLQAAVRAWLARRAYRRVRAAAVFAQCCARRGAARRALRRLK
TEARSVERFRELNRGMEVKLMQLQLRADQEAREVAALKETLRAERQAAGAELAALREKLG
CQEQEKPRHRAVVSEKEKEEVEEERRRAEEKAAQEILQLTQELQVLQRERESLYSEREDL
STRLFEQEKSQEGGFFSIMQMLVKCLVCFLLSVCVCVCVCESAALRTELDEERRKYQGLL
REFTRLEQRYDNLREMSLLTERTAGHRRTDSTCSLSLEPPSPTLLSPLSPGPLAPFPPAL
PDPEEVRRVSVTSPTETPMDQLMEAMDMARDARMSTEDLAHAYDAVRVANRFLESQLREQ
CGQREEELEALRVQLGQAAAASSPAAQQQEAQALLEAREHECVRLRRELKELRSTVSLRR
VVAQVVNPETSSWPTPSVSGLLECRKRDEAKLLKNLVTDLRADGALPLPPGLPASVLFLC
VRQADRSGDQARARALCGAAVTAVKAALKKHSSDVDMTALWLKNACLLHDLLTQHSPKQP
LDPDEVVPLASDPGDVVRALSDLCIQAYQQLLSITEKRLQNVIVPALLESETIAGLSGSA
GKPAPSRKRAGSDPRPAGGDGQAMSALLRELGALHAALSRQDLPPTLMEQAFGQLTYLIS
ASAFNSLLLRKDMCCWSRGMQIRYNVSLLEEWLRRRGLRAGGAVAALEHLIQAVQLLQAG
KKTDGDAQALVQTCTALSSQQIVKILTLYTPQSDLEERVSLNFIRTVQGLLKGRSEGLTP
QLLMDVRRVFPVTFPYSPPPVLHAEQLVIPDSLKISFLRRA
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgctggacctttacagtaagggagcaagtgtgtggattcctgacgccgatgcg
gtctgggtgtcgggcctgctcctccgggactacagtcccgcagagaagcacctcctgctg
gagctgtccgatggaagggaggcccggtacccggtcggctcccccgcggacctcccgccg
ctggggaaccccgacatcctggagggggagaacgatctgacggctctgagcttcctccac
gaacctgcggtgctgcacaacctgcgggttcggttcctggactacagcagcatctacacg
tactgcggcatcgtgttggtggcgatcaacccctacgaccagctccccatctacggccag
gaggtgatcgacgcttacagcggtcaggacgcggccgacatggaaccccacatcttttct
gtggcggaggaggcctaccgcactatgaccagggaggagaacaaccagtccatcatcatc
agtggggagtccggctcggggaaaacggtctcggccaaattcaccatgcgatactttgct
gtggttggaggagcatcgcagcagaccagcgtggaggagagagttctggcctccaacccc
attatggagtccatcgggaatgctaaaaccactcgcaacgacaacagcagccgcttcggg
aagtacatcgagatcggctttggcaggcgaggggacatcatcggggccaacatgaggacg
tatctactggagaagtctagggtggtcttccaggcgccagcggagaggaactaccacatc
ttctaccagctgtgtgcctccagagacctgccggaaatgagggccctgaagctggatgca
cccgagcgtttccgctacaccagccggggaggagagatgcagattcctggaaccgatgac
ctgctggacctggagcgcacgtgcactgctttcaccgtcctgggcgtgcagcccgaccag
cagatggagctcttcaggatcctgtcagctgttctgcacctggggaacgtggacatccaa
gccagcgggagaacgtccgaacggagttacatcgacgcgggcgaccgacctctggcgctc
ttctccaagctgctgggcgtggagggcccccaggtggcccactggctgtgtcatcgcagg
ctggcggtcgggggagagacgctggtcaaacccgtgtccggcccgcaggcccgagaggcc
cgggacgcgctggccaagcacgtctacggccggctgttcggctggacggtccgcaggctc
aacgccggcctgcgggcgcgccgcggcggcgagccggccgcgtccttcataggggtccta
gacatctacgggtttgagaccttcgaacgcaacagtttcgagcagttctgcataaattat
gcgaacgaaaaactgcaacagcaattcaacaggcacgtgttccacttggagcaggaggag
tacgtccgggaggagctgtcctggagcaggatcgagttcagtgacaatcagcaatgcatc
gatctgttggagggacaactgggcgtgtttgacctgttggacgaggagtgcaggatgccc
aaaggctcagacgagagctgggtgctgaagctgtgcgatcaacacctgagtagcaagcga
caccctcacttccagaaaccccgcgtgctcaacggcgccttcgtcattgtgcacttcgcc
gacacggtgcgatacgaaggcgacggctttttggccaagaatcgagatacggtgtttgag
gagctcgtcaacatcctcagagcgagtcagtcggagctggtggccgagttgttccagccg
cagggcgacgcctcctctgtggccgacggaagcgttcgtccggggaaacgagcccccagg
gagcacaagctgaccgtgggcttccagttccgtcggtccctgcagatgctgatggacgcc
ctgaacgccaccagcccgcactacgtccgctgcattaaacccaacgacctcaaagcagcc
ttcacgtttgaccccaggaggacagtccagcagctgagggcttgcggcgtgctggagacg
atccgcatcagcgcggcaggttttccgtccaggtggacgtacgaggagttcttcagcagg
taccgcctcctgctcgggggcctcccgggccgggagcacgcccgggcctcgtgcagacga
gcgctgccccggctcatcggggacccggaccagtactgcttcgggaagaccaaggtgttc
ttccgcgccgggcaggtggctctcctggagcggctgagaggcgagaggctgcgcgcggcc
tccgtggtcatccagagccgggtcagagggtggctggcgagggtcgcgcactccagggtc
cgccgggcgactgtcgccatccagagatactgcagaggagccgcggcccggcgacttgcg
tcgacgctgcgctacaccaaggctgccttagtgatccagaagactctgcgcatggtgctg
gtccggcagatgttcctcatgatccgacaggccgccgtcaccatccaggccttcaccagg
ggcgcgttggcacgcttcagatacagacggctggtggcggagcgggccgccgtgtcgctc
caggcggcggtgcgcgcgtggctggcccggcgggcttacaggcgggtgcgcgcggcggcg
gtcttcgcgcagtgctgcgctcgccgcggcgccgccaggagggcgctgaggagactgaag
acggaggcccgctccgtggagcggttccgagagctcaacagggggatggaagtcaagctg
atgcagctgcagctcagggcggaccaggaggccagggaggtcgcggcgctgaaagagacg
ctgcgcgccgagcgacaggccgccggcgccgagctggcggctttgagggagaagcttggg
tgccaggaacaggagaagcctcggcaccgcgccgtcgtcagcgagaaggagaaggaggag
gtggaggaggaaaggaggagagcggaggagaaagctgcccaggagatccttcaactcaca
caagagttgcaagtcctgcagagagaaagggagagtctctacagcgagagagaggatctc
tccactcgcttgtttgaacaggaaaaatcacaagaaggtgggttcttcagcatcatgcag
atgctggttaaatgcttggtttgttttttactttccgtgtgtgtgtgtgtgtgtgtgtgt
gagagtgcggctctgaggacggagttggacgaggagaggagaaagtaccagggcctcctg
agagagttcaccagactggagcaaagatacgacaacctcagggagatgagtctgctcacc
gagcgcaccgcgggccacagaaggacggactccacctgcagtctgagcttggagcctccc
tcccccaccctgctgtctcccctgtcccccggcccgctggcccccttcccgcctgccctc
cccgacccggaggaggtccgccgggtcagcgtgacgtcccccaccgaaacgccgatggac
cagttgatggaggcgatggacatggccagagacgcgaggatgagcacagaggacctggcg
cacgcttacgacgccgtgcgagtggctaacaggtttctggagagccagctaagggagcag
tgcggtcagagggaggaggagctggaggctctccgggtccagctcggtcaggcggccgct
gcttccagccccgccgcccagcagcaggaggcgcaggcgctactggaggccagggagcac
gagtgtgtcaggttgaggagggagctgaaggagctcaggagcaccgtctcactcagacga
gtcgtggcacaagtggtcaacccggagacgtcctcctggcccaccccgtccgtcagcggc
ctgctggaatgtagaaagagagacgaggccaagctcctcaagaacctcgtcacagacctc
cgtgcagacggcgccctgcctctgccccccggcctgcccgccagcgtgctcttcctgtgc
gttcgccaggccgaccgcagcggcgatcaggcgcgcgcccgcgcgctctgcggcgccgcc
gtcaccgccgtgaaggcggctctcaagaaacacagtagtgatgtagacatgaccgctttg
tggctgaaaaacgcctgtctgctgcacgacctcttgacccagcattccccaaagcagccc
ctcgacccggacgaagtggttccgttggcatccgaccccggagacgtggtccgcgccctg
agtgacctctgtatccaggcctaccagcagctcctctccatcaccgagaaacgtctgcaa
aacgtcatagtacccgctctgttggagagcgagaccatcgcaggtctgtccggctcggcg
gggaagccggcaccgtccaggaagcgggcgggttccgaccccaggccggcggggggcgac
ggccaggcgatgtcggcgttgctgagggagctgggggcccttcacgccgctttgtcccgc
caggatctgcccccgacgctgatggagcaggccttcggccagctcacctacctcatctcc
gcctccgcgttcaacagcctcctgctgaggaaggacatgtgctgctggagccgcggcatg
caaatacgctacaacgtgagcctcctggaggagtggctgcggcgccgaggcctgcgggca
gggggcgctgtggccgcgctggagcacctcatccaggcggtccagctgctgcaggccggc
aaaaagaccgatggcgacgcgcaggccctcgttcagacctgcaccgccctgtccagccag
cagatcgtgaagattctgaccctctacactccccagagtgacctcgaggaaagggtctcc
ctgaatttcatccggaccgtccaggggcttctcaaaggccgctccgagggtctgaccccc
cagctgctcatggacgtgaggcgggtgtttcctgtcacgttcccctactcgcctcccccc
gtcctccatgccgagcagctggtcatcccggactccctcaagatctccttcctccgcaga
gcctga
DBGET
integrated database retrieval system
