Pungitius pungitius (ninespine stickleback): 119216667
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Entry
119216667 CDS
T07626
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119216667 (sox2)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119216667 (sox2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
119216667
NCBI-ProteinID:
XP_037325610
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All DBs
Position
7:complement(3267163..3270236)
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AA seq
324 aa
AA seq
DB search
MYNMMETELKPPAPQTNTGGPGNTNTSGTGPNQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLSAGGNGMGAGVGVGVGAGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQL
SYQHPGLNAHNPGQMQSMHRYDMSALQYNTMASSQSYMNGSPTYSMSYSQQGTPGMTALG
SMGPSSVVKSESSSSSPPVVTSSSHRAGPGCQSGDLRDMISMYLPGAEVSEQSAQTRLHM
SGHYQSAVPGTTINGTLPLTHMEL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagcccccggctccccagaccaacacggggggc
ccgggcaacaccaacacgtccggcaccggccccaaccagaaaaacagcccggagcgggtc
aagagacccatgaacgcgttcatggtgtggtcccggggccagaggaggaagatggcgcaa
gaaaaccccaaaatgcacaactcggagataagcaagaggctgggcgcggagtggaaactt
ctgtcggagagcgagaagagacctttcatcgacgaagccaagaggctgcgggccctgcac
atgaaggagcatccggattacaaataccggccccggcggaaaaccaagacgctcatgaag
aaggacaagtacaccttgcccggcgggctgctgtccgccggaggcaacgggatgggagcc
ggcgtcggcgtcggggtcggggccgggctgggcggcggggtgaaccagcggatggacagc
tacgcggcgcacatgaacggctggaccaacggcgggtacggcatgatgcaggaccagctg
agctaccagcaccccgggctgaacgcgcacaacccgggccagatgcagtccatgcaccgc
tacgacatgagcgccctgcagtacaacaccatggccagctcccagagctacatgaacggc
tccccaacatactccatgtcctattcccagcagggcacgccggggatgaccgccctgggc
tccatggggccctcctccgtggtgaagtccgagtccagcagctccagcccgcccgtcgtc
acctcgtcatcccaccgggccggcccgggctgccaaagcggggatctgagggacatgatc
agcatgtatctgcccggggcggaggtcagcgagcagtccgcccagaccaggctacacatg
tccgggcactaccagagcgccgtgcccgggacgacgatcaacggcacgctgccgttgaca
cacatggagctctag
DBGET
integrated database retrieval system
