Pungitius pungitius (ninespine stickleback): 119216685
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Entry
119216685 CDS
T07626
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119216685 (sin3b)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
119216685 (sin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
At4g15545_C
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
119216685
NCBI-ProteinID:
XP_037325649
LinkDB
All DBs
Position
7:16450996..16464322
Genome browser
AA seq
1275 aa
AA seq
DB search
MAKIQAHSTAKQINQMQDKPYVITQKQVQQQHFQKLKVEDALSYLDQVKIRFANDPGIYN
KFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEVPKNGVAFLQSP
FSTQVCPGQQGKSVATPAVTATSGTATAANVEAGPAQTSELKSAPSESLSSSAPAGPTEP
PSRLSLPLASKESQNQATTSSVSPPAPETSPVEFDSAISYVNKIKNRFLDHPEIYRAFLE
ILHTYQKEQLEVKESRGNRGSSGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKRSLFT
GSSLTGGKDQLKRLEEEDTLTKQNKKRPRPVLLQHMSPLLKKKMKYSCTKDQSFASVGKH
GVLREFSFFDKVRRLFKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQF
KSFLGDKELSHVVSGLSDRYMEGGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTALC
KEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQ
KKLSRLSPEDQDRFRLDDCLGGTSEVIQRRAVYRIYGDKAPEIIEGLKRSPATAVPVVLK
RLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIESVY
DERQEQSTEEGGVGQQGRNGSGAASSSEPHMVFTYDDKQILEDAASLIIYHVKRQPTIHK
DDKDHIKRIIQHFVPDLFFSRRGELSDTEDWTDEEVEPEDGLERGIGGAAATAGLGGGNG
NSNNASGAPAATGGQSQPQPAQSLGLTQSQPQQQLNGESRRRRCSPSQPADTEASTTSSS
TSQAAGTASSTPGSTPMETDSGAPAEKVDLRDPEAEHQKDMDGVYNLFFVNNNWYFFLRL
HQTLCSRLRRVYQQAERQLLDHRAEQNSERLLMADGRREKSCDLAMELRLKQPSEVELEE
YYPAFLDMVRSLLDGNLDSTQYEDTLREMFTIHAYIGFTIDKVIHNIIRQLQHLVSDEVC
LQVVDLYLAERKRGAAGGNLSSQCVRAAWETSFQWKAERVMAEENCFKVMFLQNKSHVTL
TIELLDTEEAQADDPLDVQCLSSYMEQFVGTESSLCSQAEGYFFKPVFLPRNLRRFRRWQ
VRQVEAMRCRREWHRQLGVENAGSLDCRFKLNTHKMVFVMNSEDYMYRRGALVKARKSQH
RVAAGQHQRFDKWHQGWQADHVTAAAERSVQNWLLGEEEEDMIPCKTTCLATELKGQAVN
RYQVHYSGTKAPVSP
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattcaggcgcacagcaccgcgaagcaaataaaccaaatgcaagacaagcct
tacgttataacacaaaagcaagtgcagcagcagcacttccagaagctgaaggtggaagat
gccttgtcctatctggaccaagtcaaaattcgctttgcaaatgatcccggcatttacaac
aagtttctcgacatcatgaaagagttcaagtcacagagcatcgacactccgggggtgata
aaccgggtgtcacagctctttcatggacacccagacctagtcttgggcttcaatgccttt
ctaccaccggggtatcggatagaagtccccaaaaatggggtggctttcctccagtctccc
ttctccacacaggtctgcccgggccagcaagggaagagtgttgccacccctgcagtgaca
gcgacctcgggtactgccactgctgccaacgtcgaagctggacctgcccagaccagtgaa
ctcaagtcagccccatcagagtccctctcctcgtcagccccagcaggaccaacggagcct
cccagcaggctttctcttcccctggccagcaaagagagccagaaccaggcgaccacttcg
tccgtatccccacctgccccagagacgagccctgtggagttcgacagtgccatcagctac
gtaaacaagattaagaaccgtttcctggatcacccagagatctaccgagcctttctagag
attcttcacacatatcagaaggagcagctggaggtgaaggagagtcgaggaaaccgtggc
agcagcggaatgacagaagatgaggtgttctctaaagttgccagtcttttcaaagggcaa
gaagacttgctggcggagtttgggcaattcttacctgatgccaagagatcattgttcaca
ggcagctccctgacaggaggcaaagatcagctgaaaaggctggaggaagaggacacacta
accaaacaaaacaaaaagaggcccaggcccgtcctactgcagcacatgtccccactcctc
aagaagaaaatgaagtattcctgtaccaaagatcagtcctttgcttcagttggcaaacac
ggagtcttaagagaattctctttctttgataaggtccgtcgcctatttaaaagccaggag
gtgtatgagaacttcctgcgttgcattgccttgtttaaccaggaagtagtgtcgggagca
gagctgctacagctagtcactcctttcttggggaagttccctgaactatacacacagttc
aagtcatttctgggggacaaagagctctctcatgttgtgtcagggctgtcggatcgctac
atggaagggggagggggccgggaggtggattatgcctcctgcaagcgccttgggtccagc
tacagagcactgcccaagacctaccagcagcctaaatgcagcgggcgcactgccctgtgc
aaggaggtgttgaacgacacctgggtgtcatttccctcttggtcagaggactccaccttc
gtcagctcaaagaagactccttatgaggagcagctgcaccgctgcgaggatgaaagattt
gagttggatgttgttttggagacaaacctggccaccatcagagtgctagagagcgtacaa
aagaagctgtcgcgtctctccccagaggaccaggaccggttcagattagacgactgtctg
ggcggcacctctgaggtgatccagcgtcgcgctgtgtatcgtatctatggcgataaagcc
cctgagatcattgagggactgaaaaggagtcctgctaccgccgtgcctgtggtactcaag
aggttaaaagccaaggaggaggagtggagagaggcccagcagggtttcaataagatttgg
agggagcaatacgagaaggcttaccttaagtccctcgatcaccaaggagtcaacttcaaa
cagaatgacatgaaggccctgcggtcaaagagtcttcttaatgagatagagagtgtctac
gatgagcgccaggagcaaagcacggaagaaggcggcgttgggcagcagggtcgcaacggc
tctggcgcggcctcatccagcgagcctcacatggtgtttacgtatgacgacaaacagatc
ttggaggacgctgcctctctcatcatctaccacgtcaaacgtcagcccaccatccacaaa
gatgacaaagaccacatcaagcgcatcatccagcactttgtccctgacctgttcttctcc
cggcgcggcgagctcagtgatactgaagactggacagacgaggaggttgagcccgaggat
gggttagagaggggaataggaggtgcagcagcaacagcagggttaggaggaggaaatggc
aattctaacaatgcatcaggagcacccgcggccacaggtggtcagtctcaaccccaacct
gcccagtcactgggcctgacccagtcccaaccccagcagcagctcaacggtgaatccagg
cggagacgctgcagcccgtctcaacctgctgacacggaggcctccaccacctccagtagc
acaagccaggcggcagggaccgcctcgtccacccctggatcgacgccgatggagacggat
tcgggtgcacccgcggagaaggtggacctgcgcgaccctgaagcggagcaccagaaggac
atggatggcgtctacaaccttttcttcgtcaacaacaactggtatttcttcttgcggctg
caccagaccctgtgctcccgactgcgtcgcgtctaccagcaggcagagcggcagctgctg
gatcaccgagctgagcagaacagcgagaggctgctcatggcagatggaagaagagaaaag
tcatgtgacctggccatggagctccgcctcaaacagcccagtgaggtggagttagaggag
tactacccagccttccttgacatggtgcgcagcctgctggatggcaacctggactccaca
cagtatgaagacacactgagagagatgttcaccatccacgcctacatcggcttcaccatc
gacaaggtcatacacaacatcatacgccagctacagcacctagtgagcgacgaggtgtgt
ctgcaggtggttgatctttacctggctgagaggaagaggggggcggcagggggaaacctg
tcctcgcaatgtgtccgagcggcctgggagaccagcttccagtggaaagctgagcgagtc
atggctgaggagaactgcttcaaggtgatgtttctccaaaacaagagtcatgtgacgttg
actattgagctgctggacactgaggaggctcaagcagatgacccattagatgtgcagtgc
ctgtcaagctacatggagcagtttgtaggaaccgagtccagcctgtgttctcaagcagag
ggttacttcttcaaacctgtgtttctgcccaggaacctgcggcgtttccgccgctggcag
gtgaggcaggtggaggcgatgcgctgcaggagagagtggcacaggcagctgggcgtggag
aacgccgggagtctggactgtcgatttaaactcaatactcacaagatggtgtttgtcatg
aactctgaggattacatgtaccgcagaggagcgctggtcaaggccaggaagtcgcagcac
agagtggcagcgggccaacaccaacgctttgacaagtggcaccagggctggcaggccgat
cacgttacagccgcggccgagcgctccgtgcagaactggctgctgggagaagaggaagag
gacatgatcccctgcaagactacctgcctggcgaccgagttgaaagggcaagccgtgaac
agataccaggtccattacagcggtaccaaagccccggtctccccgtag
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